| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094613
Identifier: 20094613
GI number: 20094613
Start: 1168689
End: 1171121
Strand: Direct
Name: 20094613
Synonym: MK1177
Alternate gene names: NA
Gene position: 1168689-1171121 (Clockwise)
Preceding gene: 20094610
Following gene: 20094614
Centisome position: 68.95
GC content: 62.72
Gene sequence:
>2433_bases GTGCTCCGAGCGATCGCCGTCGTGATCTCGGCGCTGGTCCTCGCGGTACCAGCCCTCGCCGAGCCACAGGCTGACCTACG GGCGTTGGGAGAAAAGATCGGTAACGACGCCTTGACCACGCTCGGAGCCACGGCCGGGGACCCCAAGTTACTGGTGATCA CGGACGCCAGGGCGGTCTGGGTCGACTCGGACGGTGACGGCACGCCCGACACGCCGGCGGCGGCCGTGGCGGACGCCGTC GCGTCGGAGACCGGCTGTAAGATCGGGGAGAACCTCGTGTTCGTGCAGAGTAAGCCGGCCTCCGACCTGTTCGTGGCGGT GTTCTACGGTGACGAGAGTTCGGGTAAGCTCGTGTTCTACCGCGTGACGCACAGCCTGCTCGACAGGATCGCACGGGGCG AGGTGTCCGTCGACTCGCTGACCTTCACGAGCGATCCAAGCGACGAGAACGGCATCTACAGGTACGTGCTCGGTGACCTG ACCGCTGAGAACGTGTTTCGGGAGCTGCTGAGCGCGGCGGGGATCGACCCGAGCGGGTACATGACGGACGGTCGCATCGA CCTACAGAAGCTGGATGAACACGGCTGGGACGGCTTCGATCCGGACAAGTACACGGACGAGGCACTTCAGAGCTTCAACG ACAAGTACTTCGGTAAGATGTGCGGGTTCGGCTTCACCGTGCTGTCGATAGCCCTCTCCTGGGCGAACGGTCTGCCCAGG CGGTACCTGGCGAGCGTGGAGCGGCACGACCACCTGTGTCCGGGACTGATCAGCGGCATGTTGATCGTCGACAAGCTCCT CCGGGAGGGCAAGGCGGAAGCCGTCAGGTTTTACGTGGCCTGTCCGATCTGGTGCAAGGATGACGCGATCTACACGACCC TCGACCTGACGCAGGGTAAGCGGAACCACTTCGTGTTCCATCCGGACTCGCGGGAACGGGACCTCCTCAATCGGAAGCTC GGCGGTTCCCCGGCCGGAGTGTTCGTGCTCCAGGAGGGAGAGGACCTCAAAGCCCTCGTGGCGACGTTCAAGTGGGTCAA CTGGGGCGCGGTGTTCGGGAAGCTCGCGCGGGCCGGCTGGGGCAGCGTCAAGGGCAGGGTCTTGAACTCGATGATCCGGA TAATCTGCGACGTGGTCTTCTGTCGCGATTGGAACGTGGATCGTGTCGGGCTCAAGGAGTACCCGATGACCTGCACCGAG GCCGCGGCGATCTGCGCGGGTCGCGACCCGTACATGGTGTTGGGACTGGTTGCGCCCTACACGGACGATCCGAAGGTGGC TGCCGTCGAGCAGGCCCTGCTGTACGCGAGGAAGGTCCTGGGGCTCTCGTACGGTGACGAGCGAGCCTATGTGATCACCA ACGTCACGTACCTCAAGGACTTCGTCGACGGACGGGTGAGAAACGTCATCACCCGAACGCTGGGCCTGGACGCGACGTTT TCCGGTAGCAACCGGAGTATACAGGTGACGACGCTCGAAGACAGGATCGTCGAGTTCCACACGGACGAGACCGCGGATCC CGTGATCGCGGTGGTCAACGCGGAGACGGGTGAGGGTGTTGCGGTCGTCCTGGATCTGGCGAAGTTGGAGGGTAAGAGGG CCGAGGACATCCTGACGATGGATCCAGAGGAGTTCGTGAAGGAGTACGCGAAGGCGTACACGGATAAGGTGAAGATGAAC GCGTTCGAGATCTCGGACGAGGACAACGATAAGCTCTCGCGGCTGGGTCGGTACGCGTTCAACGTGGTCACGCTCGCAAC GGCGGTGGTTAACGGGGTGCCGAAGGACCTACTGCGGTGCGCGGCGTGGCACAACCATTTCTGCCCCGGGGTGACAAGTG GCTGGATGATCGCCAAGTACATCCAGGAGGAGATCCTCGCGAAGGAGCCGTTGAAGGACAACGAGCGACTGGTGTGGATC GGAGTACCCGTCTGGTGCAAGGAGGACGCCGTTCAGACGCTACTCGACCTGACGCCCGGTAAGCGCGGAGAGTTCGTGAT GCAGCTACCGAGGGAAGTGCAGGAGGAGCTGAAGAGGGAGTACGGCATCGACGTCGCGGGTATACTGATCAGGTACCAGT ATACCGGTAAGGGCAAGGACGAGCAGATCCTGGGCGGTAAGGCCTACGTCATCGGATTCGACTGGGACAAGGCCAACGAG ATCCGACCGAACGTCCAGTACTTCGGACACGCGGCCTGGGCCGTGGAGCTGGCGAAGCGTGATCCGAGGGAGTTCGTTAG GGTCATCAAGGAGATTAGCCTCGGCGCGGAGGACGTGAAGAAGCTGACCGAGGACACGGCACGGGTGAACCCGTTAGAGG TCGTCGGTGTGATCCACAATCCCAAACCCAAGAGGAAGCCGCCGGTGTACTGGGTGACGGTCGCGCTGGCCCTGACGTTG CTAGTTTTCCGACGCCCCCTCAAGCCCTCCTAA
Upstream 100 bases:
>100_bases CCTAAAGATCCCGCCATATGCAATACTAATTGGAAAAGTTTATCATTGAGTATTATTAGGTTCGCCAAATAGTATTCAAC GTTGTTAAGGGGGCGACGGA
Downstream 100 bases:
>100_bases CGTTCCTTCGACCCACAGCTCGTTCTTCGAGATTTCGACCTGAGATCACCCTAGGAGCGGGGGAGAAGGACCGTGCTGGC GGCCTTGATCCTGGTCGTAA
Product: metal-binding domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 810; Mature: 810
Protein sequence:
>810_residues MLRAIAVVISALVLAVPALAEPQADLRALGEKIGNDALTTLGATAGDPKLLVITDARAVWVDSDGDGTPDTPAAAVADAV ASETGCKIGENLVFVQSKPASDLFVAVFYGDESSGKLVFYRVTHSLLDRIARGEVSVDSLTFTSDPSDENGIYRYVLGDL TAENVFRELLSAAGIDPSGYMTDGRIDLQKLDEHGWDGFDPDKYTDEALQSFNDKYFGKMCGFGFTVLSIALSWANGLPR RYLASVERHDHLCPGLISGMLIVDKLLREGKAEAVRFYVACPIWCKDDAIYTTLDLTQGKRNHFVFHPDSRERDLLNRKL GGSPAGVFVLQEGEDLKALVATFKWVNWGAVFGKLARAGWGSVKGRVLNSMIRIICDVVFCRDWNVDRVGLKEYPMTCTE AAAICAGRDPYMVLGLVAPYTDDPKVAAVEQALLYARKVLGLSYGDERAYVITNVTYLKDFVDGRVRNVITRTLGLDATF SGSNRSIQVTTLEDRIVEFHTDETADPVIAVVNAETGEGVAVVLDLAKLEGKRAEDILTMDPEEFVKEYAKAYTDKVKMN AFEISDEDNDKLSRLGRYAFNVVTLATAVVNGVPKDLLRCAAWHNHFCPGVTSGWMIAKYIQEEILAKEPLKDNERLVWI GVPVWCKEDAVQTLLDLTPGKRGEFVMQLPREVQEELKREYGIDVAGILIRYQYTGKGKDEQILGGKAYVIGFDWDKANE IRPNVQYFGHAAWAVELAKRDPREFVRVIKEISLGAEDVKKLTEDTARVNPLEVVGVIHNPKPKRKPPVYWVTVALALTL LVFRRPLKPS
Sequences:
>Translated_810_residues MLRAIAVVISALVLAVPALAEPQADLRALGEKIGNDALTTLGATAGDPKLLVITDARAVWVDSDGDGTPDTPAAAVADAV ASETGCKIGENLVFVQSKPASDLFVAVFYGDESSGKLVFYRVTHSLLDRIARGEVSVDSLTFTSDPSDENGIYRYVLGDL TAENVFRELLSAAGIDPSGYMTDGRIDLQKLDEHGWDGFDPDKYTDEALQSFNDKYFGKMCGFGFTVLSIALSWANGLPR RYLASVERHDHLCPGLISGMLIVDKLLREGKAEAVRFYVACPIWCKDDAIYTTLDLTQGKRNHFVFHPDSRERDLLNRKL GGSPAGVFVLQEGEDLKALVATFKWVNWGAVFGKLARAGWGSVKGRVLNSMIRIICDVVFCRDWNVDRVGLKEYPMTCTE AAAICAGRDPYMVLGLVAPYTDDPKVAAVEQALLYARKVLGLSYGDERAYVITNVTYLKDFVDGRVRNVITRTLGLDATF SGSNRSIQVTTLEDRIVEFHTDETADPVIAVVNAETGEGVAVVLDLAKLEGKRAEDILTMDPEEFVKEYAKAYTDKVKMN AFEISDEDNDKLSRLGRYAFNVVTLATAVVNGVPKDLLRCAAWHNHFCPGVTSGWMIAKYIQEEILAKEPLKDNERLVWI GVPVWCKEDAVQTLLDLTPGKRGEFVMQLPREVQEELKREYGIDVAGILIRYQYTGKGKDEQILGGKAYVIGFDWDKANE IRPNVQYFGHAAWAVELAKRDPREFVRVIKEISLGAEDVKKLTEDTARVNPLEVVGVIHNPKPKRKPPVYWVTVALALTL LVFRRPLKPS >Mature_810_residues MLRAIAVVISALVLAVPALAEPQADLRALGEKIGNDALTTLGATAGDPKLLVITDARAVWVDSDGDGTPDTPAAAVADAV ASETGCKIGENLVFVQSKPASDLFVAVFYGDESSGKLVFYRVTHSLLDRIARGEVSVDSLTFTSDPSDENGIYRYVLGDL TAENVFRELLSAAGIDPSGYMTDGRIDLQKLDEHGWDGFDPDKYTDEALQSFNDKYFGKMCGFGFTVLSIALSWANGLPR RYLASVERHDHLCPGLISGMLIVDKLLREGKAEAVRFYVACPIWCKDDAIYTTLDLTQGKRNHFVFHPDSRERDLLNRKL GGSPAGVFVLQEGEDLKALVATFKWVNWGAVFGKLARAGWGSVKGRVLNSMIRIICDVVFCRDWNVDRVGLKEYPMTCTE AAAICAGRDPYMVLGLVAPYTDDPKVAAVEQALLYARKVLGLSYGDERAYVITNVTYLKDFVDGRVRNVITRTLGLDATF SGSNRSIQVTTLEDRIVEFHTDETADPVIAVVNAETGEGVAVVLDLAKLEGKRAEDILTMDPEEFVKEYAKAYTDKVKMN AFEISDEDNDKLSRLGRYAFNVVTLATAVVNGVPKDLLRCAAWHNHFCPGVTSGWMIAKYIQEEILAKEPLKDNERLVWI GVPVWCKEDAVQTLLDLTPGKRGEFVMQLPREVQEELKREYGIDVAGILIRYQYTGKGKDEQILGGKAYVIGFDWDKANE IRPNVQYFGHAAWAVELAKRDPREFVRVIKEISLGAEDVKKLTEDTARVNPLEVVGVIHNPKPKRKPPVYWVTVALALTL LVFRRPLKPS
Specific function: Unknown
COG id: COG5643
COG function: function code R; Protein containing a metal-binding domain shared with formylmethanofuran dehydrogenase subunit E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89562; Mature: 89562
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRAIAVVISALVLAVPALAEPQADLRALGEKIGNDALTTLGATAGDPKLLVITDARAVW CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEECCEEEE VDSDGDGTPDTPAAAVADAVASETGCKIGENLVFVQSKPASDLFVAVFYGDESSGKLVFY EECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEE RVTHSLLDRIARGEVSVDSLTFTSDPSDENGIYRYVLGDLTAENVFRELLSAAGIDPSGY HHHHHHHHHHHCCCCEECEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCC MTDGRIDLQKLDEHGWDGFDPDKYTDEALQSFNDKYFGKMCGFGFTVLSIALSWANGLPR EECCEEEHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCH RYLASVERHDHLCPGLISGMLIVDKLLREGKAEAVRFYVACPIWCKDDAIYTTLDLTQGK HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECEEECCCCEEEEEEECCCC RNHFVFHPDSRERDLLNRKLGGSPAGVFVLQEGEDLKALVATFKWVNWGAVFGKLARAGW CCCEEECCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC GSVKGRVLNSMIRIICDVVFCRDWNVDRVGLKEYPMTCTEAAAICAGRDPYMVLGLVAPY CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCEEEEEEECCC TDDPKVAAVEQALLYARKVLGLSYGDERAYVITNVTYLKDFVDGRVRNVITRTLGLDATF CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEE SGSNRSIQVTTLEDRIVEFHTDETADPVIAVVNAETGEGVAVVLDLAKLEGKRAEDILTM CCCCCEEEEEEHHHHHEEECCCCCCCCEEEEEECCCCCCEEEEEEEHHHCCCCCCCCEEC DPEEFVKEYAKAYTDKVKMNAFEISDEDNDKLSRLGRYAFNVVTLATAVVNGVPKDLLRC CHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AAWHNHFCPGVTSGWMIAKYIQEEILAKEPLKDNERLVWIGVPVWCKEDAVQTLLDLTPG HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCC KRGEFVMQLPREVQEELKREYGIDVAGILIRYQYTGKGKDEQILGGKAYVIGFDWDKANE CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCEEECCEEEEEEECCCCCCC IRPNVQYFGHAAWAVELAKRDPREFVRVIKEISLGAEDVKKLTEDTARVNPLEVVGVIHN CCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEC PKPKRKPPVYWVTVALALTLLVFRRPLKPS CCCCCCCCEEHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLRAIAVVISALVLAVPALAEPQADLRALGEKIGNDALTTLGATAGDPKLLVITDARAVW CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEECCEEEE VDSDGDGTPDTPAAAVADAVASETGCKIGENLVFVQSKPASDLFVAVFYGDESSGKLVFY EECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCEEEE RVTHSLLDRIARGEVSVDSLTFTSDPSDENGIYRYVLGDLTAENVFRELLSAAGIDPSGY HHHHHHHHHHHCCCCEECEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCC MTDGRIDLQKLDEHGWDGFDPDKYTDEALQSFNDKYFGKMCGFGFTVLSIALSWANGLPR EECCEEEHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCH RYLASVERHDHLCPGLISGMLIVDKLLREGKAEAVRFYVACPIWCKDDAIYTTLDLTQGK HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECEEECCCCEEEEEEECCCC RNHFVFHPDSRERDLLNRKLGGSPAGVFVLQEGEDLKALVATFKWVNWGAVFGKLARAGW CCCEEECCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC GSVKGRVLNSMIRIICDVVFCRDWNVDRVGLKEYPMTCTEAAAICAGRDPYMVLGLVAPY CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCEEEEEEECCC TDDPKVAAVEQALLYARKVLGLSYGDERAYVITNVTYLKDFVDGRVRNVITRTLGLDATF CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCEEE SGSNRSIQVTTLEDRIVEFHTDETADPVIAVVNAETGEGVAVVLDLAKLEGKRAEDILTM CCCCCEEEEEEHHHHHEEECCCCCCCCEEEEEECCCCCCEEEEEEEHHHCCCCCCCCEEC DPEEFVKEYAKAYTDKVKMNAFEISDEDNDKLSRLGRYAFNVVTLATAVVNGVPKDLLRC CHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AAWHNHFCPGVTSGWMIAKYIQEEILAKEPLKDNERLVWIGVPVWCKEDAVQTLLDLTPG HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCC KRGEFVMQLPREVQEELKREYGIDVAGILIRYQYTGKGKDEQILGGKAYVIGFDWDKANE CCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCEEECCEEEEEEECCCCCCC IRPNVQYFGHAAWAVELAKRDPREFVRVIKEISLGAEDVKKLTEDTARVNPLEVVGVIHN CCCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEEEC PKPKRKPPVYWVTVALALTLLVFRRPLKPS CCCCCCCCEEHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA