| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094289
Identifier: 20094289
GI number: 20094289
Start: 810419
End: 811066
Strand: Reverse
Name: 20094289
Synonym: MK0853
Alternate gene names: NA
Gene position: 811066-810419 (Counterclockwise)
Preceding gene: 20094290
Following gene: 20094288
Centisome position: 47.85
GC content: 57.41
Gene sequence:
>648_bases TTGATATTATGCCTCGCGCTCCTGATCCTTACGAGCCCCTACCTGGCTCAGATGATACTGCAATACAACACCCCGTACGG CCTGAAAGCTGGCACTTTGGTCGTCGTGTCCGGGGGGTCGTCGGTCGGTGAGACCTCCTCGCTGACTCACACCCACTCCC TCAAGGCGTGCGTAGGGAAGGTCATGAACTACGTTATAGGTCCGATTCCGACTAAGTACCATTATGGATCCGTTTTGTCC AAGTTCATGCCCACGTGGGCCGCCGTGATCTTCACTGCCGCCGTAATCGCATCCTACGTGATCTTAGCCATCCTGTCACC ATTAGCCGTGTTCCACGAGCGCGGGAGTGCAGCCGAATCGCTACTGCTATCATGGGCGGGATTTCTCGTAGTGCTCGGAG CCGTAGATGGTGGGTTCATGTGTAAACCGATGGTTATCGGACTAGGGATGCTCATCGTGTGGGCGTTAGGACCGCTTCCC GTACGACGATACGTGATCATCGCCGTTCTCATCGGCCTGACACCGATGCTCCTTCAGGCGACGATCCGTGTGGTCTGGTA CCTGACGTCCCCGTTAGCTCCTAACTCCGTAGTATGGGCGGTGGCCCTCCTCCTGATGACCGCGATCGCCAGGGGACAGG GGTGGTAG
Upstream 100 bases:
>100_bases ACCAGCTATACTACTAGCCCACCTCGGGCTGATGTGCCTATTGCTCTGGTCATCCCCTTCGATACCGAGCCGATGGATCG AGGTCCTCGCTTCGGGGAGA
Downstream 100 bases:
>100_bases TGTTGAGGACTAAGATCGTAGCCGTCCTGCTCATCTCGGCGATCTTTATCGGTGCGTTGATGGGAGTGATAACTTACCAG TGGTCGATCTCTTCAAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MILCLALLILTSPYLAQMILQYNTPYGLKAGTLVVVSGGSSVGETSSLTHTHSLKACVGKVMNYVIGPIPTKYHYGSVLS KFMPTWAAVIFTAAVIASYVILAILSPLAVFHERGSAAESLLLSWAGFLVVLGAVDGGFMCKPMVIGLGMLIVWALGPLP VRRYVIIAVLIGLTPMLLQATIRVVWYLTSPLAPNSVVWAVALLLMTAIARGQGW
Sequences:
>Translated_215_residues MILCLALLILTSPYLAQMILQYNTPYGLKAGTLVVVSGGSSVGETSSLTHTHSLKACVGKVMNYVIGPIPTKYHYGSVLS KFMPTWAAVIFTAAVIASYVILAILSPLAVFHERGSAAESLLLSWAGFLVVLGAVDGGFMCKPMVIGLGMLIVWALGPLP VRRYVIIAVLIGLTPMLLQATIRVVWYLTSPLAPNSVVWAVALLLMTAIARGQGW >Mature_215_residues MILCLALLILTSPYLAQMILQYNTPYGLKAGTLVVVSGGSSVGETSSLTHTHSLKACVGKVMNYVIGPIPTKYHYGSVLS KFMPTWAAVIFTAAVIASYVILAILSPLAVFHERGSAAESLLLSWAGFLVVLGAVDGGFMCKPMVIGLGMLIVWALGPLP VRRYVIIAVLIGLTPMLLQATIRVVWYLTSPLAPNSVVWAVALLLMTAIARGQGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22901; Mature: 22901
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILCLALLILTSPYLAQMILQYNTPYGLKAGTLVVVSGGSSVGETSSLTHTHSLKACVGK CHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH VMNYVIGPIPTKYHYGSVLSKFMPTWAAVIFTAAVIASYVILAILSPLAVFHERGSAAES HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LLLSWAGFLVVLGAVDGGFMCKPMVIGLGMLIVWALGPLPVRRYVIIAVLIGLTPMLLQA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH TIRVVWYLTSPLAPNSVVWAVALLLMTAIARGQGW HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MILCLALLILTSPYLAQMILQYNTPYGLKAGTLVVVSGGSSVGETSSLTHTHSLKACVGK CHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH VMNYVIGPIPTKYHYGSVLSKFMPTWAAVIFTAAVIASYVILAILSPLAVFHERGSAAES HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LLLSWAGFLVVLGAVDGGFMCKPMVIGLGMLIVWALGPLPVRRYVIIAVLIGLTPMLLQA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH TIRVVWYLTSPLAPNSVVWAVALLLMTAIARGQGW HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA