| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094272
Identifier: 20094272
GI number: 20094272
Start: 797005
End: 798327
Strand: Reverse
Name: 20094272
Synonym: MK0836
Alternate gene names: NA
Gene position: 798327-797005 (Counterclockwise)
Preceding gene: 20094273
Following gene: 20094269
Centisome position: 47.1
GC content: 49.06
Gene sequence:
>1323_bases GTGAGGAGGCTAGTTCTCCCCACTCTCCTCACGATGGTATTCCTCGCGGTACCCGCGACGGCGGATACCACTGCGACTAC CCCGACCGCGGAGGTGAGTACCAGTACTCAGGGGACGTTACAACAAGTCACCCAGCAGACTACGCAGCAGGAGCAGACGC CAGGGGCATCCGGTGAGTTACTCCCGCAGGTAGCCCCTAAGGCACTGGGTTATATCGCCGTAGGAGCCATTCTTTGCGCG ATTCCGAACAGGGGCACCCAGGAGCTAGGTGCGGATCTCACCCAACTGGGAGCCGAAGCGCTGACGTTAGCCGCCGCAGT GGACCACGGCCTACCGCTGAAATATCCCGTAGCATACCAGTTCAATAGGACGTACGAGAAGCTGTCATCACCGATGTACT GGGGAGAAGTAGGCTTCAACATTGTGGCACCTATGTTGGTGAATTCAATGTTATACTCGATGCTGCAACCACTTTCAGAA CAATTAGAAGTACCACCGGATGTTATTAAGAATTACATAGTTCAAACGTGCAAACTGATGGCTAAGCTTCAGGATAGACC CGTGAGTCCTGAAGACGTTATACCGGTTATTGATTCAGCAATACAGATTATAAACCAGAGTTCAAACCAAAGCTCACAGA GCAAGTTAACGGAAGATACTAAGTATGAAGTTGCTAAAACAATAGCGAACTTCTTGAATGGTATCAGGGGAAGTTCCGGA GTCCTTATAGCATCAAACGTTTGTAAGTTCGCCCTGCGATACATTAATGTAGAACCCTCTAACGGTATAAAACTGTGGAT TGGATCAGTGTTGTCGCCAGTAGTTCCAGACGTTTCCGGCACCATATCAGATGTACGTAATATCACTAGAGATATTAACA ATGCAATGATAGGAGTAAGAATTGCTACGAACCCAGTAGAAACTATACGACAAATAACCGAGGATACGGGGAATAGTATA ATTGAAACTTTCAGAACAATAGTTAAGAACGCCGATAAGCTGGGGATATCTGAAGAAACCGCCAATGAGATATTAGACGA CCTCAAGTCGATGATCTCCGATCTGACGTCGACCATCACCGACGAAATCGTGAGACCGTACGAACCGATAGTCCGTTGTC TAGGTATCGCACTGGCGATCAACTCACTGATGGACGCCTACAATTCGTTCAACAGACTGACCCAGAGACTGTCAAAGCTG GCGCTAATCGCTCGAGGTTTAGGTGTTCAGGTACCAACCCTGACGAATCCGGAAGGAGAGTTGAAACGGGCACTCGGAGT ACTGCAGCAGGGTAGAGTCGGACCACCACCGCTACCGTTCTGA
Upstream 100 bases:
>100_bases TCCTCGATACTCGGGTGAGAGGACACATCGAAGTTGAGGGCGAACAGGTAACGGAGCTCATGCGTAGGTTACTGGAGATC CTCAAGGAGGGTAAGGAGTC
Downstream 100 bases:
>100_bases CCACGGATCGGCCAGCGCCTCAGCGGCCGCCGCCATCTCCGGTTCCTCCGCGATCTCACCGGCACATTCCAAGAGCCGCA CGACCTCCTCCAACCAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MRRLVLPTLLTMVFLAVPATADTTATTPTAEVSTSTQGTLQQVTQQTTQQEQTPGASGELLPQVAPKALGYIAVGAILCA IPNRGTQELGADLTQLGAEALTLAAAVDHGLPLKYPVAYQFNRTYEKLSSPMYWGEVGFNIVAPMLVNSMLYSMLQPLSE QLEVPPDVIKNYIVQTCKLMAKLQDRPVSPEDVIPVIDSAIQIINQSSNQSSQSKLTEDTKYEVAKTIANFLNGIRGSSG VLIASNVCKFALRYINVEPSNGIKLWIGSVLSPVVPDVSGTISDVRNITRDINNAMIGVRIATNPVETIRQITEDTGNSI IETFRTIVKNADKLGISEETANEILDDLKSMISDLTSTITDEIVRPYEPIVRCLGIALAINSLMDAYNSFNRLTQRLSKL ALIARGLGVQVPTLTNPEGELKRALGVLQQGRVGPPPLPF
Sequences:
>Translated_440_residues MRRLVLPTLLTMVFLAVPATADTTATTPTAEVSTSTQGTLQQVTQQTTQQEQTPGASGELLPQVAPKALGYIAVGAILCA IPNRGTQELGADLTQLGAEALTLAAAVDHGLPLKYPVAYQFNRTYEKLSSPMYWGEVGFNIVAPMLVNSMLYSMLQPLSE QLEVPPDVIKNYIVQTCKLMAKLQDRPVSPEDVIPVIDSAIQIINQSSNQSSQSKLTEDTKYEVAKTIANFLNGIRGSSG VLIASNVCKFALRYINVEPSNGIKLWIGSVLSPVVPDVSGTISDVRNITRDINNAMIGVRIATNPVETIRQITEDTGNSI IETFRTIVKNADKLGISEETANEILDDLKSMISDLTSTITDEIVRPYEPIVRCLGIALAINSLMDAYNSFNRLTQRLSKL ALIARGLGVQVPTLTNPEGELKRALGVLQQGRVGPPPLPF >Mature_440_residues MRRLVLPTLLTMVFLAVPATADTTATTPTAEVSTSTQGTLQQVTQQTTQQEQTPGASGELLPQVAPKALGYIAVGAILCA IPNRGTQELGADLTQLGAEALTLAAAVDHGLPLKYPVAYQFNRTYEKLSSPMYWGEVGFNIVAPMLVNSMLYSMLQPLSE QLEVPPDVIKNYIVQTCKLMAKLQDRPVSPEDVIPVIDSAIQIINQSSNQSSQSKLTEDTKYEVAKTIANFLNGIRGSSG VLIASNVCKFALRYINVEPSNGIKLWIGSVLSPVVPDVSGTISDVRNITRDINNAMIGVRIATNPVETIRQITEDTGNSI IETFRTIVKNADKLGISEETANEILDDLKSMISDLTSTITDEIVRPYEPIVRCLGIALAINSLMDAYNSFNRLTQRLSKL ALIARGLGVQVPTLTNPEGELKRALGVLQQGRVGPPPLPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47572; Mature: 47572
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLVLPTLLTMVFLAVPATADTTATTPTAEVSTSTQGTLQQVTQQTTQQEQTPGASGEL CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC LPQVAPKALGYIAVGAILCAIPNRGTQELGADLTQLGAEALTLAAAVDHGLPLKYPVAYQ CHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH FNRTYEKLSSPMYWGEVGFNIVAPMLVNSMLYSMLQPLSEQLEVPPDVIKNYIVQTCKLM HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AKLQDRPVSPEDVIPVIDSAIQIINQSSNQSSQSKLTEDTKYEVAKTIANFLNGIRGSSG HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VLIASNVCKFALRYINVEPSNGIKLWIGSVLSPVVPDVSGTISDVRNITRDINNAMIGVR EEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEE IATNPVETIRQITEDTGNSIIETFRTIVKNADKLGISEETANEILDDLKSMISDLTSTIT EECCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DEIVRPYEPIVRCLGIALAINSLMDAYNSFNRLTQRLSKLALIARGLGVQVPTLTNPEGE HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH LKRALGVLQQGRVGPPPLPF HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRRLVLPTLLTMVFLAVPATADTTATTPTAEVSTSTQGTLQQVTQQTTQQEQTPGASGEL CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC LPQVAPKALGYIAVGAILCAIPNRGTQELGADLTQLGAEALTLAAAVDHGLPLKYPVAYQ CHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH FNRTYEKLSSPMYWGEVGFNIVAPMLVNSMLYSMLQPLSEQLEVPPDVIKNYIVQTCKLM HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AKLQDRPVSPEDVIPVIDSAIQIINQSSNQSSQSKLTEDTKYEVAKTIANFLNGIRGSSG HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VLIASNVCKFALRYINVEPSNGIKLWIGSVLSPVVPDVSGTISDVRNITRDINNAMIGVR EEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEE IATNPVETIRQITEDTGNSIIETFRTIVKNADKLGISEETANEILDDLKSMISDLTSTIT EECCHHHHHHHHHHHCCHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH DEIVRPYEPIVRCLGIALAINSLMDAYNSFNRLTQRLSKLALIARGLGVQVPTLTNPEGE HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH LKRALGVLQQGRVGPPPLPF HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA