| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is PurL_1
Identifier: 20094227
GI number: 20094227
Start: 750903
End: 751583
Strand: Reverse
Name: PurL_1
Synonym: MK0790
Alternate gene names: 20094227
Gene position: 751583-750903 (Counterclockwise)
Preceding gene: 20094228
Following gene: 20094222
Centisome position: 44.34
GC content: 59.77
Gene sequence:
>681_bases TTGGTCCGTGTGGCTGTCATCAGGTTTCCCGGCACGAACTGCGACCTCGAGATGGCATGGGCCGTGAAGCTCGCTGGTGG AGATCCGGAGTTCGTCTGGCACGAAGATGGTGGGTTAGACGACTTCGACGCCGTGATCATCCCGGGCGGATTCACTTACG GGGATTACATCCGGGCGGGCGCCATCGCCGCGCTATCCCCGATTTTGGAGGAGATTCGAGAGTGTGCAGAGGACGGGCGC CCCGTGCTGGGAGTGTGTAACGGAATGCAGATACTAGCCGAAGCGGAGCTCATCCCGGGTACTCTCACGGTCAACGTCGG GAACAGGTTCATCTGCGATTGGGTCTACTTACGCGTGGAACGTACTGACACCCCGTTCACGACCAAGTACCAGGAGGACG AAGTCATTCGAGTTCCGATCGCCCACGCGGAGGGACGGTACTACTACGAAAACCCGGAGGAGATCGAGGACAACGTGGTG TTCAGGTTCTGCGGACCCGACGGCGACGTCTCAGAGGAGTACAACCTCAACGGCTCCGTCGGCGGTATTACGGGAGTTGT GAACGACGATGGGAACGTCCTCGGAATGATGCCTCACCCTGAGCGCGCGGCTCACCGTCTCCTGAACTCCGATGACGGTT TACGGTTGTTCGAGTCGCTCGTCGAGTGGTGCCGATCCTGA
Upstream 100 bases:
>100_bases CGAAGACTACGAGATCGAGGTCGTCGAGTGAACCCCCTCGGCGTACTTGGGACTCCCCATCACCTCGGTCCCGGGGTAGG TCATCATCGGGGGCCTGAGT
Downstream 100 bases:
>100_bases TCCAGCAGCCAATCCAGGAGTATCGACACGGACTTGCGGGTATAACGTTCCACGTCCGACTGGTCCCACGGGTCGACACC TCGGGCCAGTTTCACCAGCT
Product: phosphoribosylformylglycinamidine synthase I
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase I; FGAM synthase I
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MVRVAVIRFPGTNCDLEMAWAVKLAGGDPEFVWHEDGGLDDFDAVIIPGGFTYGDYIRAGAIAALSPILEEIRECAEDGR PVLGVCNGMQILAEAELIPGTLTVNVGNRFICDWVYLRVERTDTPFTTKYQEDEVIRVPIAHAEGRYYYENPEEIEDNVV FRFCGPDGDVSEEYNLNGSVGGITGVVNDDGNVLGMMPHPERAAHRLLNSDDGLRLFESLVEWCRS
Sequences:
>Translated_226_residues MVRVAVIRFPGTNCDLEMAWAVKLAGGDPEFVWHEDGGLDDFDAVIIPGGFTYGDYIRAGAIAALSPILEEIRECAEDGR PVLGVCNGMQILAEAELIPGTLTVNVGNRFICDWVYLRVERTDTPFTTKYQEDEVIRVPIAHAEGRYYYENPEEIEDNVV FRFCGPDGDVSEEYNLNGSVGGITGVVNDDGNVLGMMPHPERAAHRLLNSDDGLRLFESLVEWCRS >Mature_226_residues MVRVAVIRFPGTNCDLEMAWAVKLAGGDPEFVWHEDGGLDDFDAVIIPGGFTYGDYIRAGAIAALSPILEEIRECAEDGR PVLGVCNGMQILAEAELIPGTLTVNVGNRFICDWVYLRVERTDTPFTTKYQEDEVIRVPIAHAEGRYYYENPEEIEDNVV FRFCGPDGDVSEEYNLNGSVGGITGVVNDDGNVLGMMPHPERAAHRLLNSDDGLRLFESLVEWCRS
Specific function: Unknown
COG id: COG0047
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI31657129, Length=242, Percent_Identity=33.8842975206612, Blast_Score=87, Evalue=1e-17, Organism=Escherichia coli, GI48994899, Length=233, Percent_Identity=35.1931330472103, Blast_Score=94, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17553022, Length=233, Percent_Identity=31.3304721030043, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6321498, Length=266, Percent_Identity=30.0751879699248, Blast_Score=86, Evalue=4e-18, Organism=Drosophila melanogaster, GI24582111, Length=233, Percent_Identity=29.6137339055794, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI24582109, Length=233, Percent_Identity=29.6137339055794, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI17137292, Length=233, Percent_Identity=29.6137339055794, Blast_Score=77, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURQ_METKA (Q8TX85)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614074.1 - ProteinModelPortal: Q8TX85 - SMR: Q8TX85 - GeneID: 1476891 - GenomeReviews: AE009439_GR - KEGG: mka:MK0790 - NMPDR: fig|190192.1.peg.787 - HOGENOM: HBG302712 - OMA: FPGTNCD - ProtClustDB: PRK03619 - BioCyc: MKAN190192:MK0790-MONOMER - BRENDA: 6.3.5.3 - GO: GO:0005737 - HAMAP: MF_00421 - InterPro: IPR017926 - InterPro: IPR011698 - InterPro: IPR010075 - PIRSF: PIRSF001586 - TIGRFAMs: TIGR01737
Pfam domain/function: PF07685 GATase_3
EC number: =6.3.5.3
Molecular weight: Translated: 25032; Mature: 25032
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 86-86 ACT_SITE 199-199 ACT_SITE 201-201
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRVAVIRFPGTNCDLEMAWAVKLAGGDPEFVWHEDGGLDDFDAVIIPGGFTYGDYIRAG CEEEEEEEECCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHH AIAALSPILEEIRECAEDGRPVLGVCNGMQILAEAELIPGTLTVNVGNRFICDWVYLRVE HHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEHEECCCEEEEECCCEEEEEEEEEEEE RTDTPFTTKYQEDEVIRVPIAHAEGRYYYENPEEIEDNVVFRFCGPDGDVSEEYNLNGSV CCCCCCEECCCCCCEEEEEEEECCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCC GGITGVVNDDGNVLGMMPHPERAAHRLLNSDDGLRLFESLVEWCRS CCEEEEEECCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MVRVAVIRFPGTNCDLEMAWAVKLAGGDPEFVWHEDGGLDDFDAVIIPGGFTYGDYIRAG CEEEEEEEECCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCEEEECCCCCCHHHHHHH AIAALSPILEEIRECAEDGRPVLGVCNGMQILAEAELIPGTLTVNVGNRFICDWVYLRVE HHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEHEECCCEEEEECCCEEEEEEEEEEEE RTDTPFTTKYQEDEVIRVPIAHAEGRYYYENPEEIEDNVVFRFCGPDGDVSEEYNLNGSV CCCCCCEECCCCCCEEEEEEEECCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCC GGITGVVNDDGNVLGMMPHPERAAHRLLNSDDGLRLFESLVEWCRS CCEEEEEECCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014