| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is HHT1_2
Identifier: 20094180
GI number: 20094180
Start: 705968
End: 706243
Strand: Reverse
Name: HHT1_2
Synonym: MK0743
Alternate gene names: NA
Gene position: 706243-705968 (Counterclockwise)
Preceding gene: 20094186
Following gene: 20094176
Centisome position: 41.67
GC content: 60.51
Gene sequence:
>276_bases TTGGACCCCGATCTCCCGACGAACGTTCTGGAAGAGATACTCAAGAAGTCGGCCCGATCCGCCGACGGAGTCCTCGGCGT CAGGATGAGTGCCAAGAAGGAGTACTATCGGGTGATCGAGTCCCTCAGCCTAGCACTGGCGGAGTTGTCGGTTCTCGCGG CCCGTCACGCGGGCAGGAAGACCGTAAAGGCGGAAGACGTCGAGCTAGCGGCAGCTACTCTCGATGTGATCTCTTCCATT CGCGACCCTCGCGGTAGAGGTGGATCCAGAGGGTGA
Upstream 100 bases:
>100_bases CGTCCAGGAGCTCCGGAGGCACACCCTTGATTAATGCTGATGTATCGAGGACGTAGGTGGTCAACTGAGTCCCCCCGAGC ACCCCAGGGGAGGGGAAAGC
Downstream 100 bases:
>100_bases AACACACGCACGCTAGGAGCCTAGGCAGTGGTCCCACTAGAAACGCCCGGAAGATCGCCTCACCGATTTCCTTGATCGTG TCGCGTAGCGACATCAATCC
Product: Histones H3/H4
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MDPDLPTNVLEEILKKSARSADGVLGVRMSAKKEYYRVIESLSLALAELSVLAARHAGRKTVKAEDVELAAATLDVISSI RDPRGRGGSRG
Sequences:
>Translated_91_residues MDPDLPTNVLEEILKKSARSADGVLGVRMSAKKEYYRVIESLSLALAELSVLAARHAGRKTVKAEDVELAAATLDVISSI RDPRGRGGSRG >Mature_91_residues MDPDLPTNVLEEILKKSARSADGVLGVRMSAKKEYYRVIESLSLALAELSVLAARHAGRKTVKAEDVELAAATLDVISSI RDPRGRGGSRG
Specific function: Unknown
COG id: COG2036
COG function: function code B; Histones H3 and H4
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9748; Mature: 9748
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPDLPTNVLEEILKKSARSADGVLGVRMSAKKEYYRVIESLSLALAELSVLAARHAGRK CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TVKAEDVELAAATLDVISSIRDPRGRGGSRG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDPDLPTNVLEEILKKSARSADGVLGVRMSAKKEYYRVIESLSLALAELSVLAARHAGRK CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TVKAEDVELAAATLDVISSIRDPRGRGGSRG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA