| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is DYS1
Identifier: 20094174
GI number: 20094174
Start: 701479
End: 702372
Strand: Reverse
Name: DYS1
Synonym: MK0737
Alternate gene names: 20094174
Gene position: 702372-701479 (Counterclockwise)
Preceding gene: 20094175
Following gene: 20094173
Centisome position: 41.44
GC content: 61.19
Gene sequence:
>894_bases GTGAAGCGTGAAACGTTCAGGTATCGAGGCGACATGGACCTCGACGGGTTCCTGCGAGAGATGGAACGCGTCGGCGCGTT AGGCGCCGGAAGATTGGGTAGAGCGGCACGGATCTTGGAGAAGATGTGGTCTTCGGACGACGTCACGGTCCTCCTCACCG TAGCCGGCCCTGCGGTAGCGGGTGGACTCGGCGAGCTCTTCGAGCGGCTCATCCGTGAAGGCCTCGTCGACGCCGTGATC ACGTCCGGCGCTAACGTAGTTCACGACGCCCTGGACGCCCTCGGCGGTATCCACGTGTGCTTGGGAGAGCGCAACGTCGA TGGGTACGGTCGGGTTCATGATACGCACATACCGACGGAAGCGTTCGAGAAGTTCGAGCACTTCATGCGGGAAGTCCTCT CCGATCTCTCGGGGCGCGTATCCTGCCGAGAGCTGCTGTGGGAAATGGGGAAGAGGCTCGAGAGCGGCTTCCTCAGGGCC GCAGCCGACGAAGGAGTGCCGATATACTCGCCGGGAATACTGGACTCGATGGTCGGCCTGCACGTGTGGATACACTCACA GGATCACGACTTTCACCTGGACCTTGTGGACGATATGCACCATCTCGCGGACCTCGTTTTCGAAGCCGAGGAGTTAGGAG CCATCATCTTAGGCGGGAGCGTGCCGAAGCACTTCGCGATGGGGGCCGCGATGCTTCGAGGTGGTCTGGACTACGCCGTT CAGATCACGATGGATAGGCCCGAAACGGGAAGCCTCAGTGGTGCGCCTCTGGAGGAAGGTAAATCGTGGGAGAAGGTGCG AGAAGACGCCGAGGTGGCCACCATCGTGGGGGACTACCTGATAATCTTCCCACTGCTCGCATCCGGCGTCATGCAGCGGC TGGGGATCGTATGA
Upstream 100 bases:
>100_bases ACCTAGATGTAGTCGAGCTCTGTCCCACGGTCGAAAGCCACGTGTCGCCGGTGACGGCCGCCCGCTTGGTGGGCGAATAC CTCAAGGGAGTGGCTGAAAG
Downstream 100 bases:
>100_bases TTGGGGCCTGAGCTGGCGGCGGTGTCCGGGTTCGCGCTGAAGATCGCGGACGACTTGGTAGATGAGTTGAGCCGGCCGCA GTGGGCGTTACCGTGCGGGC
Product: deoxyhypusine synthase
Products: NA
Alternate protein names: DHS
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKRETFRYRGDMDLDGFLREMERVGALGAGRLGRAARILEKMWSSDDVTVLLTVAGPAVAGGLGELFERLIREGLVDAVI TSGANVVHDALDALGGIHVCLGERNVDGYGRVHDTHIPTEAFEKFEHFMREVLSDLSGRVSCRELLWEMGKRLESGFLRA AADEGVPIYSPGILDSMVGLHVWIHSQDHDFHLDLVDDMHHLADLVFEAEELGAIILGGSVPKHFAMGAAMLRGGLDYAV QITMDRPETGSLSGAPLEEGKSWEKVREDAEVATIVGDYLIIFPLLASGVMQRLGIV
Sequences:
>Translated_297_residues MKRETFRYRGDMDLDGFLREMERVGALGAGRLGRAARILEKMWSSDDVTVLLTVAGPAVAGGLGELFERLIREGLVDAVI TSGANVVHDALDALGGIHVCLGERNVDGYGRVHDTHIPTEAFEKFEHFMREVLSDLSGRVSCRELLWEMGKRLESGFLRA AADEGVPIYSPGILDSMVGLHVWIHSQDHDFHLDLVDDMHHLADLVFEAEELGAIILGGSVPKHFAMGAAMLRGGLDYAV QITMDRPETGSLSGAPLEEGKSWEKVREDAEVATIVGDYLIIFPLLASGVMQRLGIV >Mature_297_residues MKRETFRYRGDMDLDGFLREMERVGALGAGRLGRAARILEKMWSSDDVTVLLTVAGPAVAGGLGELFERLIREGLVDAVI TSGANVVHDALDALGGIHVCLGERNVDGYGRVHDTHIPTEAFEKFEHFMREVLSDLSGRVSCRELLWEMGKRLESGFLRA AADEGVPIYSPGILDSMVGLHVWIHSQDHDFHLDLVDDMHHLADLVFEAEELGAIILGGSVPKHFAMGAAMLRGGLDYAV QITMDRPETGSLSGAPLEEGKSWEKVREDAEVATIVGDYLIIFPLLASGVMQRLGIV
Specific function: Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine
COG id: COG1899
COG function: function code O; Deoxyhypusine synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deoxyhypusine synthase family
Homologues:
Organism=Homo sapiens, GI4503325, Length=259, Percent_Identity=28.1853281853282, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17536927, Length=264, Percent_Identity=27.2727272727273, Blast_Score=107, Evalue=6e-24, Organism=Saccharomyces cerevisiae, GI6321859, Length=279, Percent_Identity=24.3727598566308, Blast_Score=97, Evalue=4e-21, Organism=Drosophila melanogaster, GI45550569, Length=254, Percent_Identity=26.3779527559055, Blast_Score=100, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DHYS_METKA (Q8TXD7)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614021.1 - ProteinModelPortal: Q8TXD7 - SMR: Q8TXD7 - GeneID: 1476838 - GenomeReviews: AE009439_GR - KEGG: mka:MK0737 - NMPDR: fig|190192.1.peg.734 - HOGENOM: HBG716221 - OMA: NAAVNER - BioCyc: MKAN190192:MK0737-MONOMER - BRENDA: 2.5.1.46 - HAMAP: MF_00153 - InterPro: IPR002773 - InterPro: IPR022899 - Gene3D: G3DSA:3.40.910.10 - PANTHER: PTHR11703
Pfam domain/function: PF01916 DS
EC number: =2.5.1.46
Molecular weight: Translated: 32476; Mature: 32476
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: ACT_SITE 265-265
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRETFRYRGDMDLDGFLREMERVGALGAGRLGRAARILEKMWSSDDVTVLLTVAGPAVA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHH GGLGELFERLIREGLVDAVITSGANVVHDALDALGGIHVCLGERNVDGYGRVHDTHIPTE CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEECCCCCHH AFEKFEHFMREVLSDLSGRVSCRELLWEMGKRLESGFLRAAADEGVPIYSPGILDSMVGL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH HVWIHSQDHDFHLDLVDDMHHLADLVFEAEELGAIILGGSVPKHFAMGAAMLRGGLDYAV EEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCEEE QITMDRPETGSLSGAPLEEGKSWEKVREDAEVATIVGDYLIIFPLLASGVMQRLGIV EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRETFRYRGDMDLDGFLREMERVGALGAGRLGRAARILEKMWSSDDVTVLLTVAGPAVA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHH GGLGELFERLIREGLVDAVITSGANVVHDALDALGGIHVCLGERNVDGYGRVHDTHIPTE CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEECCCCCHH AFEKFEHFMREVLSDLSGRVSCRELLWEMGKRLESGFLRAAADEGVPIYSPGILDSMVGL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH HVWIHSQDHDFHLDLVDDMHHLADLVFEAEELGAIILGGSVPKHFAMGAAMLRGGLDYAV EEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHCCCCEEE QITMDRPETGSLSGAPLEEGKSWEKVREDAEVATIVGDYLIIFPLLASGVMQRLGIV EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014