| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is HisD
Identifier: 20094148
GI number: 20094148
Start: 676444
End: 677739
Strand: Reverse
Name: HisD
Synonym: MK0711
Alternate gene names: 20094148
Gene position: 677739-676444 (Counterclockwise)
Preceding gene: 20094149
Following gene: 20094147
Centisome position: 39.99
GC content: 67.28
Gene sequence:
>1296_bases ATGAGGCTGCTGGTGCGACCTGAAGAGGAAGAGCTGGAACGCGTCCTACGCAGGTCGGAGATGGACGTGACGGAGGTCCT ACCCGACGTCGAGCGGATCTTCGAGGACGTAGTCGAACGCGGTGACGAGGCGCTACTGGAGTACACCGAACGGTTCGACG GGGTGAAGCTGGAAGCCGAGGACCTCCGGGTATCCGAGGACGATTTCGAGGTCGCCCGCGAGCTCGTGGACGAGCGTACC GTGGAGGCCCTCGAGGAGGCGGCCCACCGCATCGAGGAGTTCCACAGGAAGACCCTACCCCGCGTGGACAGGATCACCTT CGACGTGGAGGGGACGGAGTGCGGTCTCACGCTCCGACCCATCCCGAGGGTAGGGTGCTACGTGCCCGGTGGGCGCGCGG CCTACCCGTCAACGGCCCTCATGACCGTGATACCGGCACGCGTCGCGGGATGTCGCGAGGTGGTCGTGTGTACACCTCCC GCGGATAACGACGTGCGGGCCTCGCCGGAGGTGCTGGTGGCGGTCGAGATAGCCGGCGCGGATGCCGTTTATCGTGTCGG CGGCGCGCAGGCCATCGCGGCGCTGGCCGCGGGAACCGAGACCGTGCTCCGGGTCGATAAGATCGTGGGTCCCGGGAACG TCTACGTGACCGCGGCTAAGCTCCTGGCATACTCCAGAGGGCTAACCGACGTGGACATGCCGGCGGGTCCCTCCGAGGTG TTCGTGATCGCGGACGACTCGGCCAACCCGGACTGGCTGGCGCGGGACCTCATCGCCCAAGCGGAACACGATCCCCACGC CGCGGCGGTACTGGCCACCGACTCGGAGGAGATAGCCCGTGCGGTGAAGGAGCGTGTCGAGGAGCTGCTGGACGCGGGAA TAGAGCGGGAGGAGATCGTCCTGAAGGCGCTCGACAGGAACGGATGGATAGTCGTGCTCGACTCGCTGGAGGAGTGCGTC CGACTGGCCAATCGGTACGCCCCGGAACACCTACAGCTGTGCGTGGAGAACCCGGAAGAGCTGTTACAGGACGTGGAGAA CGCGGGCGCCGTCTTCGTGGGCCACCTGACCGCGGTACCCTTCGGGGACTACGCCACGGGCCCCAACCACGTGCTGCCGA CCGGCGGGTTCGCACGGGCCAGGGGGGCCCTAGGTACGTGGGACTTCGTGAAGATCATCCCGATCCAGCGGTTACGGGAG GGGGACGTGGAGCGTCTGGCTCCGATCGTCGAGGAGCTGGCCGAGCGTGAGGGCCTACCGAACCACGCGGAGGCGGTGAG GGCGCGCAGGTCCTGA
Upstream 100 bases:
>100_bases GACCCGGATCGTGCGAAGGGTGTGCTCCGGGAGTACGATAACGGGCGCGTGCTGGCCCGGGTTCTGGACCACATCCGAGA GCGGCTGCGGGTGTTGGCCG
Downstream 100 bases:
>100_bases GGGTTCTTAAGGGCAGCCACGTGCGCGGACGGGGGTGTGGAAGGTGCTCAAGGACGCGTACACGGCCGACGTCACTCCCG AGCGGGACGGAGAGGAGGTG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MRLLVRPEEEELERVLRRSEMDVTEVLPDVERIFEDVVERGDEALLEYTERFDGVKLEAEDLRVSEDDFEVARELVDERT VEALEEAAHRIEEFHRKTLPRVDRITFDVEGTECGLTLRPIPRVGCYVPGGRAAYPSTALMTVIPARVAGCREVVVCTPP ADNDVRASPEVLVAVEIAGADAVYRVGGAQAIAALAAGTETVLRVDKIVGPGNVYVTAAKLLAYSRGLTDVDMPAGPSEV FVIADDSANPDWLARDLIAQAEHDPHAAAVLATDSEEIARAVKERVEELLDAGIEREEIVLKALDRNGWIVVLDSLEECV RLANRYAPEHLQLCVENPEELLQDVENAGAVFVGHLTAVPFGDYATGPNHVLPTGGFARARGALGTWDFVKIIPIQRLRE GDVERLAPIVEELAEREGLPNHAEAVRARRS
Sequences:
>Translated_431_residues MRLLVRPEEEELERVLRRSEMDVTEVLPDVERIFEDVVERGDEALLEYTERFDGVKLEAEDLRVSEDDFEVARELVDERT VEALEEAAHRIEEFHRKTLPRVDRITFDVEGTECGLTLRPIPRVGCYVPGGRAAYPSTALMTVIPARVAGCREVVVCTPP ADNDVRASPEVLVAVEIAGADAVYRVGGAQAIAALAAGTETVLRVDKIVGPGNVYVTAAKLLAYSRGLTDVDMPAGPSEV FVIADDSANPDWLARDLIAQAEHDPHAAAVLATDSEEIARAVKERVEELLDAGIEREEIVLKALDRNGWIVVLDSLEECV RLANRYAPEHLQLCVENPEELLQDVENAGAVFVGHLTAVPFGDYATGPNHVLPTGGFARARGALGTWDFVKIIPIQRLRE GDVERLAPIVEELAEREGLPNHAEAVRARRS >Mature_431_residues MRLLVRPEEEELERVLRRSEMDVTEVLPDVERIFEDVVERGDEALLEYTERFDGVKLEAEDLRVSEDDFEVARELVDERT VEALEEAAHRIEEFHRKTLPRVDRITFDVEGTECGLTLRPIPRVGCYVPGGRAAYPSTALMTVIPARVAGCREVVVCTPP ADNDVRASPEVLVAVEIAGADAVYRVGGAQAIAALAAGTETVLRVDKIVGPGNVYVTAAKLLAYSRGLTDVDMPAGPSEV FVIADDSANPDWLARDLIAQAEHDPHAAAVLATDSEEIARAVKERVEELLDAGIEREEIVLKALDRNGWIVVLDSLEECV RLANRYAPEHLQLCVENPEELLQDVENAGAVFVGHLTAVPFGDYATGPNHVLPTGGFARARGALGTWDFVKIIPIQRLRE GDVERLAPIVEELAEREGLPNHAEAVRARRS
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=423, Percent_Identity=42.789598108747, Blast_Score=303, Evalue=1e-83, Organism=Saccharomyces cerevisiae, GI6319819, Length=433, Percent_Identity=41.3394919168591, Blast_Score=306, Evalue=5e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_METKA (Q8TXG3)
Other databases:
- EMBL: AE009439 - RefSeq: NP_613995.1 - ProteinModelPortal: Q8TXG3 - SMR: Q8TXG3 - GeneID: 1476812 - GenomeReviews: AE009439_GR - KEGG: mka:MK0711 - NMPDR: fig|190192.1.peg.708 - HOGENOM: HBG329596 - OMA: IEAFHRQ - BioCyc: MKAN190192:MK0711-MONOMER - BRENDA: 1.1.1.23 - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 47335; Mature: 47335
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 329-329 ACT_SITE 330-330 BINDING 127-127 BINDING 190-190 BINDING 213-213 BINDING 238-238 BINDING 260-260 BINDING 263-263 BINDING 330-330 BINDING 363-363 BINDING 417-417 BINDING 422-422
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLVRPEEEELERVLRRSEMDVTEVLPDVERIFEDVVERGDEALLEYTERFDGVKLEAE CCEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEHH DLRVSEDDFEVARELVDERTVEALEEAAHRIEEFHRKTLPRVDRITFDVEGTECGLTLRP HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCEEECC IPRVGCYVPGGRAAYPSTALMTVIPARVAGCREVVVCTPPADNDVRASPEVLVAVEIAGA CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEECC DAVYRVGGAQAIAALAAGTETVLRVDKIVGPGNVYVTAAKLLAYSRGLTDVDMPAGPSEV CHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEE FVIADDSANPDWLARDLIAQAEHDPHAAAVLATDSEEIARAVKERVEELLDAGIEREEIV EEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHH LKALDRNGWIVVLDSLEECVRLANRYAPEHLQLCVENPEELLQDVENAGAVFVGHLTAVP HHHCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECC FGDYATGPNHVLPTGGFARARGALGTWDFVKIIPIQRLREGDVERLAPIVEELAEREGLP CCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC NHAEAVRARRS CHHHHHHHCCC >Mature Secondary Structure MRLLVRPEEEELERVLRRSEMDVTEVLPDVERIFEDVVERGDEALLEYTERFDGVKLEAE CCEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEHH DLRVSEDDFEVARELVDERTVEALEEAAHRIEEFHRKTLPRVDRITFDVEGTECGLTLRP HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCEEECC IPRVGCYVPGGRAAYPSTALMTVIPARVAGCREVVVCTPPADNDVRASPEVLVAVEIAGA CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEEECC DAVYRVGGAQAIAALAAGTETVLRVDKIVGPGNVYVTAAKLLAYSRGLTDVDMPAGPSEV CHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEE FVIADDSANPDWLARDLIAQAEHDPHAAAVLATDSEEIARAVKERVEELLDAGIEREEIV EEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHH LKALDRNGWIVVLDSLEECVRLANRYAPEHLQLCVENPEELLQDVENAGAVFVGHLTAVP HHHCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECC FGDYATGPNHVLPTGGFARARGALGTWDFVKIIPIQRLREGDVERLAPIVEELAEREGLP CCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC NHAEAVRARRS CHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014