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The map label for this gene is 20094142

Identifier: 20094142

GI number: 20094142

Start: 668048

End: 669025

Strand: Reverse

Name: 20094142

Synonym: MK0705

Alternate gene names: NA

Gene position: 669025-668048 (Counterclockwise)

Preceding gene: 20094143

Following gene: 20094141

Centisome position: 39.47

GC content: 50.72

Gene sequence:

>978_bases
ATGTTGAGGAATATAGGACCTGTGATACGTCTAATTGTACTCATATTGTATCCACTCGCACTACCGCTAGCCCGAATTTT
AGTCATTCGCATGTCTCCTGAATACCTTAGAAGAATGGATTATCTCCTCCAAGTAAGCAATATCGACGTACCCTATGAGA
TATATCTATCCGCATCACTCATTTACGTACTTATAGGAATGTCGATCTCAGGACCATTAATTCCAAAACTAGGATCGACC
GCGTTCTTACTCGCAGTAATGCCGTTATACTTATTAATACACCCCCGTATAGTTCAGAGTTTGAGAATTAAAGATATTGA
AGAAAACCTGCCAGATGCTCTACGACAAATGGTAGAGGAGCTCCGCGCGGGTCTTTCTATATTCGAAACCATTCGGAACG
TAGCCGAGTCGGACTACGGGGAACTATCACGAGAGTTCCGGATAGTCGTCCGGGATATGGATACGGGCAAAACGTTCGAG
GAAGCCATCTTGGACATGGCCGAGCGCGTGAATTCGGAGCTCCTAACACGTGCAGTCCGTCTGACGGTCAGGATCTCTAT
GTCCGGTGGAGCGCTGGCCGACGTGCTTGAAGCCGTCGAAAACGATATCCGAGAGGTGCGTAGGATAGAACTGGAACGGA
AAGCCATCACGACCATGCCCTGCCTCGCACTGGCGCTGGGAGGGCTTATTTCAGGACTCCCAGTCGGAGTATCGATCGGA
GCCGTGATAGGAGTGGCGATGATGGAGAGGATGGGCCCCACCTACGCCATGCTCCCGATGTACCTTCAAGCGAAGGATCC
TCTGGCTTCGTATCCGCTTGTGTTGGGGTTGTTGTCGGGAATGGCAATAGGAATCATCAGGTACGGAAACATGAAAAGGG
GGTTGGTATTCGGGCTACCGTTGGGTGCTGCCGCCGCCGGTGTGTACTTGGCGATAGTGTCGGTGATGCCATCGTTCCTC
GCAGCAGGGGGAATGTAA

Upstream 100 bases:

>100_bases
AGCAGGAATGGTCGGCGTGATGGCGGGGATATTCCTGTTCATATTCAAATCGGCGGAGCCTAAGGTTTAGGGGGCCATTA
TCGTGCTCCCACTGCTACCG

Downstream 100 bases:

>100_bases
TTGAGGAGCTCCGGCCAAGGCGGTATAGAGTACCTTATTTTAATCGCCGCTCTCGCGGGTCTTGGGATAATGATCGCGTA
TTACTATTGGACCTCCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Type II Secretion System F Domain Protein; Bacterial Type II Secretion System Protein F Domain; Type II Secretion System; Type II Secretion System Protein F GspF; Type II Secretion System Protein GspF; Flp Pilus Assembly Protein TadC; Type II Secretion Protein F; Bacterial Type II Secretion System Protein F Domain Protein

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MLRNIGPVIRLIVLILYPLALPLARILVIRMSPEYLRRMDYLLQVSNIDVPYEIYLSASLIYVLIGMSISGPLIPKLGST
AFLLAVMPLYLLIHPRIVQSLRIKDIEENLPDALRQMVEELRAGLSIFETIRNVAESDYGELSREFRIVVRDMDTGKTFE
EAILDMAERVNSELLTRAVRLTVRISMSGGALADVLEAVENDIREVRRIELERKAITTMPCLALALGGLISGLPVGVSIG
AVIGVAMMERMGPTYAMLPMYLQAKDPLASYPLVLGLLSGMAIGIIRYGNMKRGLVFGLPLGAAAAGVYLAIVSVMPSFL
AAGGM

Sequences:

>Translated_325_residues
MLRNIGPVIRLIVLILYPLALPLARILVIRMSPEYLRRMDYLLQVSNIDVPYEIYLSASLIYVLIGMSISGPLIPKLGST
AFLLAVMPLYLLIHPRIVQSLRIKDIEENLPDALRQMVEELRAGLSIFETIRNVAESDYGELSREFRIVVRDMDTGKTFE
EAILDMAERVNSELLTRAVRLTVRISMSGGALADVLEAVENDIREVRRIELERKAITTMPCLALALGGLISGLPVGVSIG
AVIGVAMMERMGPTYAMLPMYLQAKDPLASYPLVLGLLSGMAIGIIRYGNMKRGLVFGLPLGAAAAGVYLAIVSVMPSFL
AAGGM
>Mature_325_residues
MLRNIGPVIRLIVLILYPLALPLARILVIRMSPEYLRRMDYLLQVSNIDVPYEIYLSASLIYVLIGMSISGPLIPKLGST
AFLLAVMPLYLLIHPRIVQSLRIKDIEENLPDALRQMVEELRAGLSIFETIRNVAESDYGELSREFRIVVRDMDTGKTFE
EAILDMAERVNSELLTRAVRLTVRISMSGGALADVLEAVENDIREVRRIELERKAITTMPCLALALGGLISGLPVGVSIG
AVIGVAMMERMGPTYAMLPMYLQAKDPLASYPLVLGLLSGMAIGIIRYGNMKRGLVFGLPLGAAAAGVYLAIVSVMPSFL
AAGGM

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35560; Mature: 35560

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRNIGPVIRLIVLILYPLALPLARILVIRMSPEYLRRMDYLLQVSNIDVPYEIYLSASL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IYVLIGMSISGPLIPKLGSTAFLLAVMPLYLLIHPRIVQSLRIKDIEENLPDALRQMVEE
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRAGLSIFETIRNVAESDYGELSREFRIVVRDMDTGKTFEEAILDMAERVNSELLTRAVR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
LTVRISMSGGALADVLEAVENDIREVRRIELERKAITTMPCLALALGGLISGLPVGVSIG
HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AVIGVAMMERMGPTYAMLPMYLQAKDPLASYPLVLGLLSGMAIGIIRYGNMKRGLVFGLP
HHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEECC
LGAAAAGVYLAIVSVMPSFLAAGGM
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRNIGPVIRLIVLILYPLALPLARILVIRMSPEYLRRMDYLLQVSNIDVPYEIYLSASL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
IYVLIGMSISGPLIPKLGSTAFLLAVMPLYLLIHPRIVQSLRIKDIEENLPDALRQMVEE
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRAGLSIFETIRNVAESDYGELSREFRIVVRDMDTGKTFEEAILDMAERVNSELLTRAVR
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
LTVRISMSGGALADVLEAVENDIREVRRIELERKAITTMPCLALALGGLISGLPVGVSIG
HHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AVIGVAMMERMGPTYAMLPMYLQAKDPLASYPLVLGLLSGMAIGIIRYGNMKRGLVFGLP
HHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEEECC
LGAAAAGVYLAIVSVMPSFLAAGGM
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA