| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094013
Identifier: 20094013
GI number: 20094013
Start: 536146
End: 536853
Strand: Reverse
Name: 20094013
Synonym: MK0575
Alternate gene names: NA
Gene position: 536853-536146 (Counterclockwise)
Preceding gene: 20094016
Following gene: 20094011
Centisome position: 31.67
GC content: 60.17
Gene sequence:
>708_bases ATGCCCATCTGCGTCGAGGAACCCGAGAGGATCCGCGAGGCCGCCGAATCACTCATGGAGACCCTAGACCTCGACTTGTA TCCCGTGGCAATGAAGCTGTATCTCAGCGAGGGAGACGTTCCTGACGACTACGAGCGGGTGGGGGAGGAGTGCCGTCATT GCGAGTTCGTGATGACGGTGGCTCGTGGTGAGATGGACAATATCTACGCGACCCCGGAGGAGCAGGCGTGCAAGGGCGGG TCTGCCGCCATAGGACTCGACGACATCCCGGATCCCGTGCGGACGGGTAAGTTCTACTACGAGGGACTCGGGCAGCACGC TACACTCTCGGCTTCCAAACGCACGGTCGAGCTGGTACCGAAGGCCTTCGACGGGGAGGGCGTGTTCGAGGCGATCACCT ACGAGAAGGCCACCGGCGTCGAAGTGGTACCGGACGTCATCCTAGTGGTATGCAAACCGAAGGAGGCTATGAAAATAGCC CAGGCGTACCTGTACCCGGAAGGTGGTAGGGTGTACTCCGATTTCTCCGGCATCCAGTCCCTGTGCGGGGATGGAGTGGG CAAGATCATGAAGGAAGGCGGCATTAACTTCACGCTCGGATGCAACGGTTCGCGTGCTTACGCGAAGGTCCCGGATGAGT GCCTGATAGTGGCGATGTCTACGAAGGCGTTCGTCGTGGTGGGTCACTCAGTGACCGAGATCCCGTAG
Upstream 100 bases:
>100_bases GTCCACCCCCATTTACCAGTGAATTATGATTCGTAACTTTTAATACGTGTAAGTGCTCGATAGTCGAACGACCGAGAACA AACGATCTGGGGGCGGACTC
Downstream 100 bases:
>100_bases TGTCCGCGTTATTCCCACGGTGACGGCCCTTTTCGGTACCCCACATAGTATCCTATCGCTATCGCTACTATGAGACCTAT GGGGAACCAAGGTAGCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MPICVEEPERIREAAESLMETLDLDLYPVAMKLYLSEGDVPDDYERVGEECRHCEFVMTVARGEMDNIYATPEEQACKGG SAAIGLDDIPDPVRTGKFYYEGLGQHATLSASKRTVELVPKAFDGEGVFEAITYEKATGVEVVPDVILVVCKPKEAMKIA QAYLYPEGGRVYSDFSGIQSLCGDGVGKIMKEGGINFTLGCNGSRAYAKVPDECLIVAMSTKAFVVVGHSVTEIP
Sequences:
>Translated_235_residues MPICVEEPERIREAAESLMETLDLDLYPVAMKLYLSEGDVPDDYERVGEECRHCEFVMTVARGEMDNIYATPEEQACKGG SAAIGLDDIPDPVRTGKFYYEGLGQHATLSASKRTVELVPKAFDGEGVFEAITYEKATGVEVVPDVILVVCKPKEAMKIA QAYLYPEGGRVYSDFSGIQSLCGDGVGKIMKEGGINFTLGCNGSRAYAKVPDECLIVAMSTKAFVVVGHSVTEIP >Mature_234_residues PICVEEPERIREAAESLMETLDLDLYPVAMKLYLSEGDVPDDYERVGEECRHCEFVMTVARGEMDNIYATPEEQACKGGS AAIGLDDIPDPVRTGKFYYEGLGQHATLSASKRTVELVPKAFDGEGVFEAITYEKATGVEVVPDVILVVCKPKEAMKIAQ AYLYPEGGRVYSDFSGIQSLCGDGVGKIMKEGGINFTLGCNGSRAYAKVPDECLIVAMSTKAFVVVGHSVTEIP
Specific function: Unknown
COG id: COG2043
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003748 [H]
Pfam domain/function: PF02596 DUF169 [H]
EC number: NA
Molecular weight: Translated: 25509; Mature: 25378
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPICVEEPERIREAAESLMETLDLDLYPVAMKLYLSEGDVPDDYERVGEECRHCEFVMTV CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH ARGEMDNIYATPEEQACKGGSAAIGLDDIPDPVRTGKFYYEGLGQHATLSASKRTVELVP HCCCCCCEEECCHHHHCCCCCEEECCCCCCCHHHCCCHHHHCCCCCEEECCCCCEEEECC KAFDGEGVFEAITYEKATGVEVVPDVILVVCKPKEAMKIAQAYLYPEGGRVYSDFSGIQS CCCCCCCHHHHHHHCCCCCCEECCCEEEEEECCHHHHHHHHHHCCCCCCEEHHHHHHHHH LCGDGVGKIMKEGGINFTLGCNGSRAYAKVPDECLIVAMSTKAFVVVGHSVTEIP HHCCCHHHHHHHCCCEEEEECCCCCCEEECCCEEEEEEECCCEEEEECCCCCCCC >Mature Secondary Structure PICVEEPERIREAAESLMETLDLDLYPVAMKLYLSEGDVPDDYERVGEECRHCEFVMTV CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH ARGEMDNIYATPEEQACKGGSAAIGLDDIPDPVRTGKFYYEGLGQHATLSASKRTVELVP HCCCCCCEEECCHHHHCCCCCEEECCCCCCCHHHCCCHHHHCCCCCEEECCCCCEEEECC KAFDGEGVFEAITYEKATGVEVVPDVILVVCKPKEAMKIAQAYLYPEGGRVYSDFSGIQS CCCCCCCHHHHHHHCCCCCCEECCCEEEEEECCHHHHHHHHHHCCCCCCEEHHHHHHHHH LCGDGVGKIMKEGGINFTLGCNGSRAYAKVPDECLIVAMSTKAFVVVGHSVTEIP HHCCCHHHHHHHCCCEEEEECCCCCCEEECCCEEEEEEECCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]