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The map label for this gene is EhbK [C]

Identifier: 20093899

GI number: 20093899

Start: 427686

End: 428825

Strand: Reverse

Name: EhbK [C]

Synonym: MK0461

Alternate gene names: 20093899

Gene position: 428825-427686 (Counterclockwise)

Preceding gene: 20093900

Following gene: 20093898

Centisome position: 25.3

GC content: 52.72

Gene sequence:

>1140_bases
GTGGTGGTCGATCTTCACTTCTCCTTCGAGGATCGTCTTCGTAACGTGACCATCAACATCGTGGAAGTCGAACGGCCCGA
CGAGTGCGCGGGATGTGGCCTCTGTGCCGAAGTCTGCCCTACCGGAGCGATCGAGGTGGACGAGCGGGTGCGGCTCGATG
AGGATCGGTGTGTTGCATGTTCTTTCTGTGTACAGGCGTGCCCTCGGGATGTATTCAGGTTTTATGAGGTATCATTCACG
GAATTAAAGCCGAAACGTAGACCCGTTCGTGTCCCTAAGGCAGATATTGAAGTGAGGTTCATTGGTGTTGATCTCCGTAC
ATGTGATCGTTGTGAAAATAGGCCCTGCATCGAGGTATGTCCCACCGGAGTTATGCGTGAGATCATTGAAGAACACAGAA
TAGACCTGGACGCATGTCATGGGTGTTTAGAATGTGTAAAAGTTTGTCCTTATGGTAGTGTCACGGTAGAGTTGGAGGTA
CCTCAGCTCAAACGTCGAAGCAATCCACGACTGAATAGGGAACTGTGTGTTGAGTGTAACCGTTGTCACGAGGTGTGTCC
AACAGGTGCCGCTGATAACGTGCCAGATGGAGATCCGGACCCTGAACGGTGCCTAGGATGTTATAATTGTGTGGCATACT
GTCCCACGGAAGCACTGAAACGACCCGATCATCGTCCACGACCTAAGTGTACTGACGAAGTGTTTTACATACAACCTGAC
ATGTGCATAGGATGTCGTATATGCTACGATGTCTGCCCGGTGGATGCGATACGCATCGAGGAGATAACTCGGATGCCTGT
GATCATGCCCGACCTGTGCGTGCGATGCGGCCTATGCGCGGACGCCTGTCCGACATCGGCCGTGGACCGCGTACCTACGG
AGGAGGCCGAGCGTGAAGTGCTGCGGTCTCGGATCTCCGATGCGTTCCTCGGCATCTTAACCCGAGAAATGCTGGAAGCG
GCTGAAGAATTCGGCTCAACTACGAGGACTGAAAGAGACGTCGAGGAGAAGCTTTCCGAACTTTTAGAACGCAAGATGTC
TGAGGAAATGATACGCCGTGTCATCGAGTTCGAAGTGAAGAACGTGATAGAGGAGCTCATGGCTGAGGTGGTGAGTGGAC
GTGATAGTCGAGGTCCGTGA

Upstream 100 bases:

>100_bases
CTGCCCAGTTGCGGGTGCCATCAAGCTGGTTCCTACAGACACCGACGAGCTAGTGAAGCGGTGGAAGGAGTACCTCGAAG
CTTCGCTCCGGGGGTGACCG

Downstream 100 bases:

>100_bases
AGTTGTTGTGATACACGAGCTATGCCGCGCCTGTGGTCTTTGTGAGAAAGAGTGTCCCACAGGCGCGATTGAGGTGGAGG
ATTCCGCTAAGATCGACGAA

Product: ferredoxin

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MVVDLHFSFEDRLRNVTINIVEVERPDECAGCGLCAEVCPTGAIEVDERVRLDEDRCVACSFCVQACPRDVFRFYEVSFT
ELKPKRRPVRVPKADIEVRFIGVDLRTCDRCENRPCIEVCPTGVMREIIEEHRIDLDACHGCLECVKVCPYGSVTVELEV
PQLKRRSNPRLNRELCVECNRCHEVCPTGAADNVPDGDPDPERCLGCYNCVAYCPTEALKRPDHRPRPKCTDEVFYIQPD
MCIGCRICYDVCPVDAIRIEEITRMPVIMPDLCVRCGLCADACPTSAVDRVPTEEAEREVLRSRISDAFLGILTREMLEA
AEEFGSTTRTERDVEEKLSELLERKMSEEMIRRVIEFEVKNVIEELMAEVVSGRDSRGP

Sequences:

>Translated_379_residues
MVVDLHFSFEDRLRNVTINIVEVERPDECAGCGLCAEVCPTGAIEVDERVRLDEDRCVACSFCVQACPRDVFRFYEVSFT
ELKPKRRPVRVPKADIEVRFIGVDLRTCDRCENRPCIEVCPTGVMREIIEEHRIDLDACHGCLECVKVCPYGSVTVELEV
PQLKRRSNPRLNRELCVECNRCHEVCPTGAADNVPDGDPDPERCLGCYNCVAYCPTEALKRPDHRPRPKCTDEVFYIQPD
MCIGCRICYDVCPVDAIRIEEITRMPVIMPDLCVRCGLCADACPTSAVDRVPTEEAEREVLRSRISDAFLGILTREMLEA
AEEFGSTTRTERDVEEKLSELLERKMSEEMIRRVIEFEVKNVIEELMAEVVSGRDSRGP
>Mature_379_residues
MVVDLHFSFEDRLRNVTINIVEVERPDECAGCGLCAEVCPTGAIEVDERVRLDEDRCVACSFCVQACPRDVFRFYEVSFT
ELKPKRRPVRVPKADIEVRFIGVDLRTCDRCENRPCIEVCPTGVMREIIEEHRIDLDACHGCLECVKVCPYGSVTVELEV
PQLKRRSNPRLNRELCVECNRCHEVCPTGAADNVPDGDPDPERCLGCYNCVAYCPTEALKRPDHRPRPKCTDEVFYIQPD
MCIGCRICYDVCPVDAIRIEEITRMPVIMPDLCVRCGLCADACPTSAVDRVPTEEAEREVLRSRISDAFLGILTREMLEA
AEEFGSTTRTERDVEEKLSELLERKMSEEMIRRVIEFEVKNVIEELMAEVVSGRDSRGP

Specific function: Probably Involved In The Transfer Of Electrons From The Quinone Pool To The Type-C Cytochromes. [C]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 8 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 43081; Mature: 43081

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
11.1 %Cys+Met (Translated Protein)
8.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
11.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVDLHFSFEDRLRNVTINIVEVERPDECAGCGLCAEVCPTGAIEVDERVRLDEDRCVAC
CEEEEECCHHHHHCCEEEEEEEECCCCCHHCCCHHHHHCCCCCEECCCHHCCCCCHHHHH
SFCVQACPRDVFRFYEVSFTELKPKRRPVRVPKADIEVRFIGVDLRTCDRCENRPCIEVC
HHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHCCCCHHHHC
PTGVMREIIEEHRIDLDACHGCLECVKVCPYGSVTVELEVPQLKRRSNPRLNRELCVECN
CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCCCCHHHHHHHH
RCHEVCPTGAADNVPDGDPDPERCLGCYNCVAYCPTEALKRPDHRPRPKCTDEVFYIQPD
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEECCC
MCIGCRICYDVCPVDAIRIEEITRMPVIMPDLCVRCGLCADACPTSAVDRVPTEEAEREV
HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHH
LRSRISDAFLGILTREMLEAAEEFGSTTRTERDVEEKLSELLERKMSEEMIRRVIEFEVK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVIEELMAEVVSGRDSRGP
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVVDLHFSFEDRLRNVTINIVEVERPDECAGCGLCAEVCPTGAIEVDERVRLDEDRCVAC
CEEEEECCHHHHHCCEEEEEEEECCCCCHHCCCHHHHHCCCCCEECCCHHCCCCCHHHHH
SFCVQACPRDVFRFYEVSFTELKPKRRPVRVPKADIEVRFIGVDLRTCDRCENRPCIEVC
HHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHCCCCHHHHC
PTGVMREIIEEHRIDLDACHGCLECVKVCPYGSVTVELEVPQLKRRSNPRLNRELCVECN
CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCCCCHHHHHHHH
RCHEVCPTGAADNVPDGDPDPERCLGCYNCVAYCPTEALKRPDHRPRPKCTDEVFYIQPD
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEECCC
MCIGCRICYDVCPVDAIRIEEITRMPVIMPDLCVRCGLCADACPTSAVDRVPTEEAEREV
HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHH
LRSRISDAFLGILTREMLEAAEEFGSTTRTERDVEEKLSELLERKMSEEMIRRVIEFEVK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVIEELMAEVVSGRDSRGP
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]