| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is EhaP [C]
Identifier: 20093898
GI number: 20093898
Start: 427268
End: 427711
Strand: Reverse
Name: EhaP [C]
Synonym: MK0460
Alternate gene names: 20093898
Gene position: 427711-427268 (Counterclockwise)
Preceding gene: 20093899
Following gene: 20093897
Centisome position: 25.23
GC content: 55.18
Gene sequence:
>444_bases GTGGACGTGATAGTCGAGGTCCGTGAAGTTGTTGTGATACACGAGCTATGCCGCGCCTGTGGTCTTTGTGAGAAAGAGTG TCCCACAGGCGCGATTGAGGTGGAGGATTCCGCTAAGATCGACGAAAAAGACTGTGTGCGGTGCGGCTTGTGTGTGGAAG TATGTCCTTTCGATGCCATACTCCTCGGCCGTGCCACATGTGAGCTTCCCAAAGGAAGTTACCGAATCGAGGTCCTGACA AAACGTCCCGAAGTGAGCGTGCGGATATCCGAGTCCAAATGTGTCGGTTGTCAAGCGTGCTCTTCTTCCTGCCCGGTTGA AGCGCTCTTCGGAGCGAAAGGGTCTCCCCCTAAGTTAGACGTTGATCGGTGTGTAGGATGTCTCGAGTGCGTTCGAATCT GTCCGTCCCGTGCTATCGAACCCGTGGGGGGATTCCGGGGATGA
Upstream 100 bases:
>100_bases TCCGAACTTTTAGAACGCAAGATGTCTGAGGAAATGATACGCCGTGTCATCGAGTTCGAAGTGAAGAACGTGATAGAGGA GCTCATGGCTGAGGTGGTGA
Downstream 100 bases:
>100_bases AAACGCTTGAAATTTCGATCGATAAGGTAGTTGAAATGGTGTTAGATCGTGTGGAAGACGCTGATGAAGATACAGTGTTG GAAGTACTTTCTGAGACACC
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MDVIVEVREVVVIHELCRACGLCEKECPTGAIEVEDSAKIDEKDCVRCGLCVEVCPFDAILLGRATCELPKGSYRIEVLT KRPEVSVRISESKCVGCQACSSSCPVEALFGAKGSPPKLDVDRCVGCLECVRICPSRAIEPVGGFRG
Sequences:
>Translated_147_residues MDVIVEVREVVVIHELCRACGLCEKECPTGAIEVEDSAKIDEKDCVRCGLCVEVCPFDAILLGRATCELPKGSYRIEVLT KRPEVSVRISESKCVGCQACSSSCPVEALFGAKGSPPKLDVDRCVGCLECVRICPSRAIEPVGGFRG >Mature_147_residues MDVIVEVREVVVIHELCRACGLCEKECPTGAIEVEDSAKIDEKDCVRCGLCVEVCPFDAILLGRATCELPKGSYRIEVLT KRPEVSVRISESKCVGCQACSSSCPVEALFGAKGSPPKLDVDRCVGCLECVRICPSRAIEPVGGFRG
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: NA
Molecular weight: Translated: 15794; Mature: 15794
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 12.2 %Cys+Met (Translated Protein) 11.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 12.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVIVEVREVVVIHELCRACGLCEKECPTGAIEVEDSAKIDEKDCVRCGLCVEVCPFDAI CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCHHHCCCHHH LLGRATCELPKGSYRIEVLTKRPEVSVRISESKCVGCQACSSSCPVEALFGAKGSPPKLD HHCCCEECCCCCCEEEEEEECCCCEEEEECCCCCCCHHHCCCCCCCCEECCCCCCCCCCC VDRCVGCLECVRICPSRAIEPVGGFRG HHHHHHHHHHHHHCHHHCCCCCCCCCC >Mature Secondary Structure MDVIVEVREVVVIHELCRACGLCEKECPTGAIEVEDSAKIDEKDCVRCGLCVEVCPFDAI CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCHHHCCCHHH LLGRATCELPKGSYRIEVLTKRPEVSVRISESKCVGCQACSSSCPVEALFGAKGSPPKLD HHCCCEECCCCCCEEEEEEECCCCEEEEECCCCCCCHHHCCCCCCCCEECCCCCCCCCCC VDRCVGCLECVRICPSRAIEPVGGFRG HHHHHHHHHHHHHCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]