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The map label for this gene is 20093895

Identifier: 20093895

GI number: 20093895

Start: 425367

End: 425804

Strand: Reverse

Name: 20093895

Synonym: MK0457

Alternate gene names: NA

Gene position: 425804-425367 (Counterclockwise)

Preceding gene: 20093896

Following gene: 20093892

Centisome position: 25.12

GC content: 56.16

Gene sequence:

>438_bases
GTGGCGCGTGACGACGAGATCGCCGTACTCACGCAGTCCAGGCTGGAGCGCGTCGCGAGGAGTCGTCCCAGAGGCGATCT
GTGGGAGTTCTTGAAGCGAGCGTACGAGAAAGGCGTGAAGATAGACGCAGGTCACCTCATCATTCTGTCCGTGTTGGAGG
AGGCGAACAGGCTGCTAGATCAGCTCTCAAAAACCGTGGGCGAAAAGCGTGCGAAACAGATACTGAAAGAGGCCGGTATC
TACACCAAAACCGGCAACTACGTGAGCGGCGAGCTGCTTAAGGAGTACATCAATCGAGAGAGCCGCGTAGCCGTCCACAA
TAGGGTGAAGGACCTCCGTAAGATGGGTTTCAAGATCGACGGAAAGCCCGGTCCCGACGGGGGTTATTCACTGATCCAAG
TTCCGGAATGGTACCGGAAGAGTTCGCGTGAGGATTAA

Upstream 100 bases:

>100_bases
AAGCGCAGACGCGAGCTCAGGGGTATGTAACGCCCTACGGCGGCGTGGAAAGTTAAAATCCTCGAAACGTTATAGGGGAC
GGAACGGGGGTGATCCCGAC

Downstream 100 bases:

>100_bases
TCCAATACCTCCACTTTACCGAACCCCTTCACGGTTCCTCTCACGGTTCCCAGGGCCTTCTCACTGACCTCGAGGAACAC
CTCAACACCGTCGTTCGACC

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MARDDEIAVLTQSRLERVARSRPRGDLWEFLKRAYEKGVKIDAGHLIILSVLEEANRLLDQLSKTVGEKRAKQILKEAGI
YTKTGNYVSGELLKEYINRESRVAVHNRVKDLRKMGFKIDGKPGPDGGYSLIQVPEWYRKSSRED

Sequences:

>Translated_145_residues
MARDDEIAVLTQSRLERVARSRPRGDLWEFLKRAYEKGVKIDAGHLIILSVLEEANRLLDQLSKTVGEKRAKQILKEAGI
YTKTGNYVSGELLKEYINRESRVAVHNRVKDLRKMGFKIDGKPGPDGGYSLIQVPEWYRKSSRED
>Mature_144_residues
ARDDEIAVLTQSRLERVARSRPRGDLWEFLKRAYEKGVKIDAGHLIILSVLEEANRLLDQLSKTVGEKRAKQILKEAGIY
TKTGNYVSGELLKEYINRESRVAVHNRVKDLRKMGFKIDGKPGPDGGYSLIQVPEWYRKSSRED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 16629; Mature: 16498

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDDEIAVLTQSRLERVARSRPRGDLWEFLKRAYEKGVKIDAGHLIILSVLEEANRLLD
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
QLSKTVGEKRAKQILKEAGIYTKTGNYVSGELLKEYINRESRVAVHNRVKDLRKMGFKID
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEC
GKPGPDGGYSLIQVPEWYRKSSRED
CCCCCCCCCHHEECCHHHHHCCCCC
>Mature Secondary Structure 
ARDDEIAVLTQSRLERVARSRPRGDLWEFLKRAYEKGVKIDAGHLIILSVLEEANRLLD
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
QLSKTVGEKRAKQILKEAGIYTKTGNYVSGELLKEYINRESRVAVHNRVKDLRKMGFKID
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEC
GKPGPDGGYSLIQVPEWYRKSSRED
CCCCCCCCCHHEECCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]