Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is yjhP [C]

Identifier: 20093891

GI number: 20093891

Start: 422752

End: 423300

Strand: Reverse

Name: yjhP [C]

Synonym: MK0453

Alternate gene names: 20093891

Gene position: 423300-422752 (Counterclockwise)

Preceding gene: 20093892

Following gene: 20093890

Centisome position: 24.97

GC content: 53.73

Gene sequence:

>549_bases
ATGATAGGGAAAAGGAAGGTAGAGAGACTGCTCGATGAGTTCCCGAACGAGGTGGAGTATCACCGGAGCGACGACCACGT
GGTGACGTGTCCAACGGAGCTATACCTCGTACCGACACCCATCGAGATCGTGGTTGAGATCCTTCGAAAGCTGGAGTTAA
CTCCTAAAAATAGAGTGGTGGATCTGGGCTGCGGAGACGGTCGCTTCGTGATCTCGGCCGCCTACCTGTATGGGTGTGAA
GGGATGGGGGTGGACGTACGGGAGGATGTGCTCGAGTTAGCCCGCGCAAAATCCGAAACACTTAGAGTAGACGATAAAAC
CATCTTTATACATTCTGACGTCCGGGACATCGACCTGCGGGAGTTAAATCCGGACGTCGTATTCGTGTATTTAATGCCGT
CTCTCCTCGAGGAAATATCAGAGGAGCTGGTATCGTGCGGAGCTACCGTCGTGAGCTATACCTTCGAGGTTCCGGGGTTA
GGCGTACCGGAGGTGCTGCGACTGGACGATTTACGACGCGCTTACGTGTACAGGGGAGTCTCACATTGA

Upstream 100 bases:

>100_bases
ATAACCCCAAGGCACGGTGACGTGTACAGGGGAATAGCCCGCAGGTTCGGAAAGCTCGAGGAGCTTCGCGGATACCACTC
GCCTAAGCGGAGGATCGAAG

Downstream 100 bases:

>100_bases
ACCTCGTAGCTGAGGCCGTCAGAAGGTTCAAGTCGGTTGATCTAATACGTTCTCAAATCCTCGGCCTTAAGGGGTTACTG
CCGCGGAAGGATCGGGCGGT

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MIGKRKVERLLDEFPNEVEYHRSDDHVVTCPTELYLVPTPIEIVVEILRKLELTPKNRVVDLGCGDGRFVISAAYLYGCE
GMGVDVREDVLELARAKSETLRVDDKTIFIHSDVRDIDLRELNPDVVFVYLMPSLLEEISEELVSCGATVVSYTFEVPGL
GVPEVLRLDDLRRAYVYRGVSH

Sequences:

>Translated_182_residues
MIGKRKVERLLDEFPNEVEYHRSDDHVVTCPTELYLVPTPIEIVVEILRKLELTPKNRVVDLGCGDGRFVISAAYLYGCE
GMGVDVREDVLELARAKSETLRVDDKTIFIHSDVRDIDLRELNPDVVFVYLMPSLLEEISEELVSCGATVVSYTFEVPGL
GVPEVLRLDDLRRAYVYRGVSH
>Mature_182_residues
MIGKRKVERLLDEFPNEVEYHRSDDHVVTCPTELYLVPTPIEIVVEILRKLELTPKNRVVDLGCGDGRFVISAAYLYGCE
GMGVDVREDVLELARAKSETLRVDDKTIFIHSDVRDIDLRELNPDVVFVYLMPSLLEEISEELVSCGATVVSYTFEVPGL
GVPEVLRLDDLRRAYVYRGVSH

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20654; Mature: 20654

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGKRKVERLLDEFPNEVEYHRSDDHVVTCPTELYLVPTPIEIVVEILRKLELTPKNRVV
CCCHHHHHHHHHHCCCHHCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCEE
DLGCGDGRFVISAAYLYGCEGMGVDVREDVLELARAKSETLRVDDKTIFIHSDVRDIDLR
EECCCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCHHH
ELNPDVVFVYLMPSLLEEISEELVSCGATVVSYTFEVPGLGVPEVLRLDDLRRAYVYRGV
HCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCC
SH
CC
>Mature Secondary Structure
MIGKRKVERLLDEFPNEVEYHRSDDHVVTCPTELYLVPTPIEIVVEILRKLELTPKNRVV
CCCHHHHHHHHHHCCCHHCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCEE
DLGCGDGRFVISAAYLYGCEGMGVDVREDVLELARAKSETLRVDDKTIFIHSDVRDIDLR
EECCCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCHHH
ELNPDVVFVYLMPSLLEEISEELVSCGATVVSYTFEVPGLGVPEVLRLDDLRRAYVYRGV
HCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCC
SH
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA