| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093766
Identifier: 20093766
GI number: 20093766
Start: 319527
End: 320099
Strand: Direct
Name: 20093766
Synonym: MK0328
Alternate gene names: NA
Gene position: 319527-320099 (Clockwise)
Preceding gene: 20093765
Following gene: 20093767
Centisome position: 18.85
GC content: 61.78
Gene sequence:
>573_bases TTGTCGGACGACAAGCGCTCCTACGCCAGACCGCTCGGTAGGACCGCGATGTTCGTGGTCGCGTCCGGAGGGTACTACCA GCTCTACTGGTTCTACCGCAACTGGAAGGACTTCAAGGAGTACCTAGGCCGCGACGTCAACGTGGTGCTCAGAACGATCG GGCTGTTCGTACCGTTCGTCAACCTCTACCTGGTGTGGAAGCAGTTCGTGGAGATCAACGAGTTACTCGAGGAGGCCGGA CTCGACCCGTGTCCGACCAAGATCCTGTACCCGGTGTGGTTCGGGTTCTTCTTCGCCGGCAACAGGGGGATTTTCCACGC CGAGACGCGGGTGGACGCGCTCGGCGCGATCGTGGCGTTGATGGTGTCCTGCGTACCGCTTCTGGTGGTGCAGAAGAAGC TCAACGAGTACTGGAGGGAGGTACAGGGGGGACTTACCCCCACGTGGAGTGTCCAAGGGCGAGCTGACGGTGGTGGCGGT GTCGTGCCTGCTGATATGGGGAGGGTTGCTGATCTGGGAGTGAACGCCCGATCCCGTCGCACCGACTCGGGTGAACCGCG GGCGGAGACGTAA
Upstream 100 bases:
>100_bases GCTCTCACGCCATCTCCTGCGCAACCGTTGAATTAACTTCAAAGAGCTTGTACCAAGGGTACGACCGCCTGTGTGTGCGG CTGAAGATGGGGGTACACGT
Downstream 100 bases:
>100_bases CCCGCGCGGAAAGGCCGGGGTCGGGTTCCACCGGTCGTACCCGGGAGCGCCGTCGGGATGAAGAGGTTATCCCACGCGGT GCCCGTCTGCCGCGCGGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSDDKRSYARPLGRTAMFVVASGGYYQLYWFYRNWKDFKEYLGRDVNVVLRTIGLFVPFVNLYLVWKQFVEINELLEEAG LDPCPTKILYPVWFGFFFAGNRGIFHAETRVDALGAIVALMVSCVPLLVVQKKLNEYWREVQGGLTPTWSVQGRADGGGG VVPADMGRVADLGVNARSRRTDSGEPRAET
Sequences:
>Translated_190_residues MSDDKRSYARPLGRTAMFVVASGGYYQLYWFYRNWKDFKEYLGRDVNVVLRTIGLFVPFVNLYLVWKQFVEINELLEEAG LDPCPTKILYPVWFGFFFAGNRGIFHAETRVDALGAIVALMVSCVPLLVVQKKLNEYWREVQGGLTPTWSVQGRADGGGG VVPADMGRVADLGVNARSRRTDSGEPRAET >Mature_189_residues SDDKRSYARPLGRTAMFVVASGGYYQLYWFYRNWKDFKEYLGRDVNVVLRTIGLFVPFVNLYLVWKQFVEINELLEEAGL DPCPTKILYPVWFGFFFAGNRGIFHAETRVDALGAIVALMVSCVPLLVVQKKLNEYWREVQGGLTPTWSVQGRADGGGGV VPADMGRVADLGVNARSRRTDSGEPRAET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21425; Mature: 21294
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDKRSYARPLGRTAMFVVASGGYYQLYWFYRNWKDFKEYLGRDVNVVLRTIGLFVPFV CCCCHHHHHHHCCCEEEEEEECCCEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHH NLYLVWKQFVEINELLEEAGLDPCPTKILYPVWFGFFFAGNRGIFHAETRVDALGAIVAL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH MVSCVPLLVVQKKLNEYWREVQGGLTPTWSVQGRADGGGGVVPADMGRVADLGVNARSRR HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCC TDSGEPRAET CCCCCCCCCC >Mature Secondary Structure SDDKRSYARPLGRTAMFVVASGGYYQLYWFYRNWKDFKEYLGRDVNVVLRTIGLFVPFV CCCHHHHHHHCCCEEEEEEECCCEEEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHH NLYLVWKQFVEINELLEEAGLDPCPTKILYPVWFGFFFAGNRGIFHAETRVDALGAIVAL HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH MVSCVPLLVVQKKLNEYWREVQGGLTPTWSVQGRADGGGGVVPADMGRVADLGVNARSRR HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCC TDSGEPRAET CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA