| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093755
Identifier: 20093755
GI number: 20093755
Start: 309026
End: 309403
Strand: Reverse
Name: 20093755
Synonym: MK0317
Alternate gene names: NA
Gene position: 309403-309026 (Counterclockwise)
Preceding gene: 20093756
Following gene: 20093751
Centisome position: 18.25
GC content: 69.84
Gene sequence:
>378_bases CTGAAGCGGAGTCCGGTGGCGGAGCTCTTCCCCGAGGCCTTCCTGAGCGAGCTCACTCCGAAGGAGGGTGAGGTGGTCGC GAACCCGGCCCGGCAGGAGGAGCCGGTTCTGGAGTTCGAGGAGGGGCTCCGGAAGTCGTTCGAGGCGATGAGGGAGTGCC TGCCGAAGGACGGCCGGCTCACGGTCATGTTCACGCACCGGGAGCTGCGGGCTTGGGACACGCTCGTGCGGGCCCTCCGG GACGCGGGCTTCCGGGTGAACGCAGCCTGGCCCGTGCACACGGAGGCGCAGTGGTCGCTGTACCAGCGGGATAAGGCCGC GGCCCGGTACACGTTGATCCTGGCGTGCGATCCGTGGGAGGGCGACGGGGAGGTCTAG
Upstream 100 bases:
>100_bases TGCCCACACTCCTCGAGGAGAAGCCGGACACGATCGTCGTGGACCCACCCTACTACACAACGTCCAGTACTCCGAGCTCA CCGACTTCTTCTACGTGTAG
Downstream 100 bases:
>100_bases TGGTCGGAGGTCCGGGACGAGGTGCGGGATCGAGTCGAGAAGGCGGTGAATCGGGCGGAGGAGCTGGGGATCGAGGGAGT GGACAAGCTGGTGGTCGCCT
Product: DNA methylase containing a Zn-ribbon
Products: NA
Alternate protein names: DNA Methylase Containing A Zn-Ribbon Module; Adenine-Specific DNA Methylase; DNA Methylase Containing A Zn-Ribbon
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MKRSPVAELFPEAFLSELTPKEGEVVANPARQEEPVLEFEEGLRKSFEAMRECLPKDGRLTVMFTHRELRAWDTLVRALR DAGFRVNAAWPVHTEAQWSLYQRDKAAARYTLILACDPWEGDGEV
Sequences:
>Translated_125_residues MKRSPVAELFPEAFLSELTPKEGEVVANPARQEEPVLEFEEGLRKSFEAMRECLPKDGRLTVMFTHRELRAWDTLVRALR DAGFRVNAAWPVHTEAQWSLYQRDKAAARYTLILACDPWEGDGEV >Mature_125_residues MKRSPVAELFPEAFLSELTPKEGEVVANPARQEEPVLEFEEGLRKSFEAMRECLPKDGRLTVMFTHRELRAWDTLVRALR DAGFRVNAAWPVHTEAQWSLYQRDKAAARYTLILACDPWEGDGEV
Specific function: Unknown
COG id: COG1743
COG function: function code L; Adenine-specific DNA methylase containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14347; Mature: 14347
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSPVAELFPEAFLSELTPKEGEVVANPARQEEPVLEFEEGLRKSFEAMRECLPKDGRL CCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE TVMFTHRELRAWDTLVRALRDAGFRVNAAWPVHTEAQWSLYQRDKAAARYTLILACDPWE EEEEECHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCC GDGEV CCCCC >Mature Secondary Structure MKRSPVAELFPEAFLSELTPKEGEVVANPARQEEPVLEFEEGLRKSFEAMRECLPKDGRL CCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE TVMFTHRELRAWDTLVRALRDAGFRVNAAWPVHTEAQWSLYQRDKAAARYTLILACDPWE EEEEECHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCC GDGEV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA