| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20093712
Identifier: 20093712
GI number: 20093712
Start: 261597
End: 262133
Strand: Reverse
Name: 20093712
Synonym: MK0272
Alternate gene names: NA
Gene position: 262133-261597 (Counterclockwise)
Preceding gene: 20093715
Following gene: 20093710
Centisome position: 15.47
GC content: 61.82
Gene sequence:
>537_bases GTGTTCTCAGGGATCCGGGAGGGTGCAGTGCAGGTTCCCAAGTGGATCCTGGACGTGCTAACGGGGAAAAAGTTGAGGGT TCATGAGCTACGGGCTCCCGTGTGGGTGGGTCATCGTGAGCTGATGTTACTGTCTATGGACGTACGGGACGACGAGAACC CTCTGTCGCTGACTGCAGGGGTCCTGGGACTTTTCTCGGCGGCTCTGGCGGACGTGTTCACGTGGTCACGCGGTTCGGAA CTCTCGTACCCGCTGACATCCGCGAACGGTGACGCGTGGCGAGTGTGCGTTGACGCGGCCGTCTTGGCGGTAATCGACGC CTTCTCGTCCGAGCTTGAGGTGTCGGTGGAGGCGTTCGTCTCCGAGGCGGGTATCCCGTGGTTAGCGACCCTCGCGAACA ACGGGTTCAGGCCCGAGTCCGTGATCCGGGGTACCGACGAGGTATTCGTGGCCACGCTGCTTAACCTGCTGAAGTACGAG GTTAAGCACAGGTGTGGGGATCGCTGGAGGGACGTGTGGAGACGCCTGGACCGCTGA
Upstream 100 bases:
>100_bases AAGGATGTGGGAAGTGTGCACGGGCCTCAGCCCGAGTGCCGGTCTTCACAGATCCGACGATGCGTACCGGGGTCTCATCA TCTCCGGGGGTCTGGGCGGC
Downstream 100 bases:
>100_bases TCAGCGCCGTGCCCTGGCGGTGGGTAGCTCCAGGAGCGTCTTGAGGTCGCTCATGTACAGATCTCGTATGTCGTCTATTC CCAACTTCAGCATCGCCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MFSGIREGAVQVPKWILDVLTGKKLRVHELRAPVWVGHRELMLLSMDVRDDENPLSLTAGVLGLFSAALADVFTWSRGSE LSYPLTSANGDAWRVCVDAAVLAVIDAFSSELEVSVEAFVSEAGIPWLATLANNGFRPESVIRGTDEVFVATLLNLLKYE VKHRCGDRWRDVWRRLDR
Sequences:
>Translated_178_residues MFSGIREGAVQVPKWILDVLTGKKLRVHELRAPVWVGHRELMLLSMDVRDDENPLSLTAGVLGLFSAALADVFTWSRGSE LSYPLTSANGDAWRVCVDAAVLAVIDAFSSELEVSVEAFVSEAGIPWLATLANNGFRPESVIRGTDEVFVATLLNLLKYE VKHRCGDRWRDVWRRLDR >Mature_178_residues MFSGIREGAVQVPKWILDVLTGKKLRVHELRAPVWVGHRELMLLSMDVRDDENPLSLTAGVLGLFSAALADVFTWSRGSE LSYPLTSANGDAWRVCVDAAVLAVIDAFSSELEVSVEAFVSEAGIPWLATLANNGFRPESVIRGTDEVFVATLLNLLKYE VKHRCGDRWRDVWRRLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19868; Mature: 19868
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSGIREGAVQVPKWILDVLTGKKLRVHELRAPVWVGHRELMLLSMDVRDDENPLSLTAG CCCCHHHHHHHHHHHHHHHHCCCCEEHHHHCCCEEECCCEEEEEEECCCCCCCCHHHHHH VLGLFSAALADVFTWSRGSELSYPLTSANGDAWRVCVDAAVLAVIDAFSSELEVSVEAFV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEAGIPWLATLANNGFRPESVIRGTDEVFVATLLNLLKYEVKHRCGDRWRDVWRRLDR HHCCCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure MFSGIREGAVQVPKWILDVLTGKKLRVHELRAPVWVGHRELMLLSMDVRDDENPLSLTAG CCCCHHHHHHHHHHHHHHHHCCCCEEHHHHCCCEEECCCEEEEEEECCCCCCCCHHHHHH VLGLFSAALADVFTWSRGSELSYPLTSANGDAWRVCVDAAVLAVIDAFSSELEVSVEAFV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEAGIPWLATLANNGFRPESVIRGTDEVFVATLLNLLKYEVKHRCGDRWRDVWRRLDR HHCCCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA