| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093693
Identifier: 20093693
GI number: 20093693
Start: 244787
End: 245512
Strand: Direct
Name: 20093693
Synonym: MK0253
Alternate gene names: NA
Gene position: 244787-245512 (Clockwise)
Preceding gene: 20093692
Following gene: 20093698
Centisome position: 14.44
GC content: 59.78
Gene sequence:
>726_bases GTGTCCCTCCTGAAACATCTTTCCGAGCTGGGATTGTCCGAACGAGAGGCGCGGGTGTACCTGTACCTGGTCCGCGCCGG TGAGGCCAACGCACGGGAGGTGAGCGAGGGAGTCGAGATCCCGTACTCGAAGGTTTACTCCGTCCTACGATCGCTGGAAG ACAAGGGATGGGTGGAAGCCGACCGGAGCGCCAGACCTACCACCTACCGACCGGTATCCCCGGACGTCGCGGTGAAGCGA GCCCTGGAGCAAGAGCTGAACAGGATCCGACGTGAGCTGGAGGAACACGCCAAGGTCGCCGTGAGGAAACTTTCCGAGAT ATACAGAGCGGAACGCGAGACCGTGGCCCGCACGTATCACGGTAAGTCCGCCAGGGAAACGCTCGCAGAAGTGCTAAGAT CGTCGGAAGACATAGCCTGCATCGTCCACTTAGGCCGCAATCTGCCACGCTGGCTCCTGGAGTCGCTTCGGCGGATGGAA GGTTTGATGATCCTTAGGGCTAAGGAAGGGTCCGAGGTCGCCGACGAACTGGAACCCGATGTGAAGGCACCCATCGATAT CGAACCCCGAAACACCTTAATAGTGCTCTCAGCGGACCGCCGCGAGTTTTTCTTGGGTAAGTTCGGTGAGGGCGACTACC TGCTCTCACTCGAGGAGCCGATACTGGCCCAAGGGATTCACGATGCGGTCACGAGAGCGTGTAAATCGCGCTCACGGCAC GCTTGA
Upstream 100 bases:
>100_bases GCATCTCGGCGAACATCGACGCGGTGCCCCAGATCCGGCGGATCGTAGCCCGGGTAGAGCGGAAGATACTGCTGGATAAG ATGAGGGAGTTCTAACGCCC
Downstream 100 bases:
>100_bases GTACCGGGTCAGGTAAGACCCTAAAGCCTAGGAAGGACAGCACCGACTCCAACTTGTCCGAAGTCCACACGCACCAGTCC AGCGGAGTCCTGGGCGGCGG
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSLLKHLSELGLSEREARVYLYLVRAGEANAREVSEGVEIPYSKVYSVLRSLEDKGWVEADRSARPTTYRPVSPDVAVKR ALEQELNRIRRELEEHAKVAVRKLSEIYRAERETVARTYHGKSARETLAEVLRSSEDIACIVHLGRNLPRWLLESLRRME GLMILRAKEGSEVADELEPDVKAPIDIEPRNTLIVLSADRREFFLGKFGEGDYLLSLEEPILAQGIHDAVTRACKSRSRH A
Sequences:
>Translated_241_residues MSLLKHLSELGLSEREARVYLYLVRAGEANAREVSEGVEIPYSKVYSVLRSLEDKGWVEADRSARPTTYRPVSPDVAVKR ALEQELNRIRRELEEHAKVAVRKLSEIYRAERETVARTYHGKSARETLAEVLRSSEDIACIVHLGRNLPRWLLESLRRME GLMILRAKEGSEVADELEPDVKAPIDIEPRNTLIVLSADRREFFLGKFGEGDYLLSLEEPILAQGIHDAVTRACKSRSRH A >Mature_240_residues SLLKHLSELGLSEREARVYLYLVRAGEANAREVSEGVEIPYSKVYSVLRSLEDKGWVEADRSARPTTYRPVSPDVAVKRA LEQELNRIRRELEEHAKVAVRKLSEIYRAERETVARTYHGKSARETLAEVLRSSEDIACIVHLGRNLPRWLLESLRRMEG LMILRAKEGSEVADELEPDVKAPIDIEPRNTLIVLSADRREFFLGKFGEGDYLLSLEEPILAQGIHDAVTRACKSRSRHA
Specific function: Unknown
COG id: COG1378
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27445; Mature: 27313
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLKHLSELGLSEREARVYLYLVRAGEANAREVSEGVEIPYSKVYSVLRSLEDKGWVEA CHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC DRSARPTTYRPVSPDVAVKRALEQELNRIRRELEEHAKVAVRKLSEIYRAERETVARTYH CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKSARETLAEVLRSSEDIACIVHLGRNLPRWLLESLRRMEGLMILRAKEGSEVADELEPD CCHHHHHHHHHHHCCCCEEHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHCCCC VKAPIDIEPRNTLIVLSADRREFFLGKFGEGDYLLSLEEPILAQGIHDAVTRACKSRSRH CCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCC A C >Mature Secondary Structure SLLKHLSELGLSEREARVYLYLVRAGEANAREVSEGVEIPYSKVYSVLRSLEDKGWVEA HHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC DRSARPTTYRPVSPDVAVKRALEQELNRIRRELEEHAKVAVRKLSEIYRAERETVARTYH CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKSARETLAEVLRSSEDIACIVHLGRNLPRWLLESLRRMEGLMILRAKEGSEVADELEPD CCHHHHHHHHHHHCCCCEEHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHCCCC VKAPIDIEPRNTLIVLSADRREFFLGKFGEGDYLLSLEEPILAQGIHDAVTRACKSRSRH CCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA