| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093677
Identifier: 20093677
GI number: 20093677
Start: 223440
End: 225296
Strand: Reverse
Name: 20093677
Synonym: MK0237
Alternate gene names: NA
Gene position: 225296-223440 (Counterclockwise)
Preceding gene: 20093680
Following gene: 20093676
Centisome position: 13.29
GC content: 63.11
Gene sequence:
>1857_bases TTGAGGGGTCCGTGGATCCCGGCGCTCGCGCTCTTAATTACCCTTATAGGTTCCACCTCCGCGGCGCCCACGGTGGTCCT CGACGAATCGCACCTCGTGGTGTTCAAGGTACCGGACGCCAACGGTCAAGTCGTGGAGAAAGGAGCCGGGGACAACCCCG GGTACCGCGTCCCGCCCGGGGACTCCGGCAACTACGGGGGGTACAAGTTCCCGGCATGCGCGTACTGGGTACCCTACTTC TCGCTCCTGTCCTACGAGGACGCCGACGGTAGAATCCACGTGTTCCCGGCGGTCACGCGTGGATCTCAGTTAGGCGTTAT GGGCATCGCCGACCACGTGATCAACGAGGTGCTGCCCTCCTCGCCGCGGATCGAGGTGGACCTGTCGTCCGGGACCCCGG ATCCACTGGAGCTGTTCACGGCCCTAGGTTACAGCCATCTCGTGCTGATAGTCTCCGAGTACGACTCACTCGCCATCTCG TCCGCCCTGGCGCTCAAATGGAAGGCTGTAGAGGACCTCCGTCGTCGGCTGCCCGAGGCTGCGGAGCACCCGGAGAAGGT CGGTGTGGTGATCGCGCTCATGGCGAGAGCCACGGTCATCTCCCCCACGGAGACCAAGGACGTACTGATACCCCTGGTTC CCGGCGCGCACGTGATTAACCCCGCCAGTCCCTTCACGTGGCAGGGCGTTGAGAACGATCCGTTCTATCGGCTGTGCGTG AACTCCGATCTCATCGTGGTCGTGTATAAGACCGAGGCGTTCAGGGAGGAGGCCAGGCTGGTCTTCGGCGACGACGCGAT TTACGTCCGGGCTTCGGCGGACATCACCGCCGGAGCTCCCGCCGTGATCTTCAACGTTCCACGGCGAGCGGAGTCGTGGA GGGTGGCTCAAACGTTCGAGCCCTGGCCCAGCTCGCTGTACTTGGGCGCCCTCTACGGGTTGCCGATCGCCTGGGCGGCC GAGGACCTGCGCCTGACGGGTTACAGCTGGGAGGGCGTCATCTTGGTCCCTTCACCGGCGGAAAGTGGGATGTACTGGGA TATAACATCGGAGTTCGACGAAGTGCTCCCCGAGATCCTGGGGGCGAACCCACACATCTTCCTGTCCTACATGACGCTGA CCGACCCCTGGAACAACTCGATCCAGGTGGGCACACCCAACTTCTACGCCGCGCTCCCGTGCCTGGGGCACTACCCCTGG GACCTGATCGGGGTGGATCTGACTACCAGCACCCTGCTGTTCGACCTCAAGGACTACCTCGTGGTGACGTACAACCGGAT CCCGGAGGGGAACGACCAGGAGCTGGGCTGGGGGTTGGTGGGGCCGTACGCGGTGGTGTTCGAGGGTCCTAAAGGTCGTC CCCTGATACTCACGTGGTATGCCCTGGCGTCCGGCTTCTGCGAGTGGGCTTGGAACAGATACTTGGAGTTCAATAGGATC CCGGACCAACTGTACGACGTGGAGGCGGTGGCCGTAGGGCTCGAGGGCGTCTTCGCGCTGGCCAAGGGCCTGATCCTGGG AGACATCAACAACGTGCTTTCCAACAGGGACTACAGGTTCACGGTGTTCTTCGGGTACCCGATACGCTCCTGGGAGACCG AGGCCAGGATTCAGTTCGACGCGGACGCTCCGAACCGCCATTACACCGTGATCATGGGTCGAGGGGACAGCCCGGTACCC GACGTCCCGTTCATGTTGGCGCAGTCGAGCGACGTCTACGCGATCCTGACCCTGGAACCGCTCCGTACGGACACAGGTCC CGACGTCAGTCCGAACAACGCTAAACGGTGGGTGGTGACCCCATGGGTCGCCTTGTCGATAGTACCGCTGTTACTGTCGC GGCGCTCCTCGCGCTGA
Upstream 100 bases:
>100_bases TTTCGAGATACTCATGGATCCGCTCCGACGGGTCGACGTGACCCGATTCGATGTCTTTTACCGCTTCCCTCAGCATCGTT CCTCCCCGCGGGGTGGGCGG
Downstream 100 bases:
>100_bases TCGTTCCAGTGAACGCCCACGTCTACGTCGTGGTGAACGTCCCGGATCAGGTACACACCAAATACCATTGGATGAGGGTC TTCGTCACGGCGGCGTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MRGPWIPALALLITLIGSTSAAPTVVLDESHLVVFKVPDANGQVVEKGAGDNPGYRVPPGDSGNYGGYKFPACAYWVPYF SLLSYEDADGRIHVFPAVTRGSQLGVMGIADHVINEVLPSSPRIEVDLSSGTPDPLELFTALGYSHLVLIVSEYDSLAIS SALALKWKAVEDLRRRLPEAAEHPEKVGVVIALMARATVISPTETKDVLIPLVPGAHVINPASPFTWQGVENDPFYRLCV NSDLIVVVYKTEAFREEARLVFGDDAIYVRASADITAGAPAVIFNVPRRAESWRVAQTFEPWPSSLYLGALYGLPIAWAA EDLRLTGYSWEGVILVPSPAESGMYWDITSEFDEVLPEILGANPHIFLSYMTLTDPWNNSIQVGTPNFYAALPCLGHYPW DLIGVDLTTSTLLFDLKDYLVVTYNRIPEGNDQELGWGLVGPYAVVFEGPKGRPLILTWYALASGFCEWAWNRYLEFNRI PDQLYDVEAVAVGLEGVFALAKGLILGDINNVLSNRDYRFTVFFGYPIRSWETEARIQFDADAPNRHYTVIMGRGDSPVP DVPFMLAQSSDVYAILTLEPLRTDTGPDVSPNNAKRWVVTPWVALSIVPLLLSRRSSR
Sequences:
>Translated_618_residues MRGPWIPALALLITLIGSTSAAPTVVLDESHLVVFKVPDANGQVVEKGAGDNPGYRVPPGDSGNYGGYKFPACAYWVPYF SLLSYEDADGRIHVFPAVTRGSQLGVMGIADHVINEVLPSSPRIEVDLSSGTPDPLELFTALGYSHLVLIVSEYDSLAIS SALALKWKAVEDLRRRLPEAAEHPEKVGVVIALMARATVISPTETKDVLIPLVPGAHVINPASPFTWQGVENDPFYRLCV NSDLIVVVYKTEAFREEARLVFGDDAIYVRASADITAGAPAVIFNVPRRAESWRVAQTFEPWPSSLYLGALYGLPIAWAA EDLRLTGYSWEGVILVPSPAESGMYWDITSEFDEVLPEILGANPHIFLSYMTLTDPWNNSIQVGTPNFYAALPCLGHYPW DLIGVDLTTSTLLFDLKDYLVVTYNRIPEGNDQELGWGLVGPYAVVFEGPKGRPLILTWYALASGFCEWAWNRYLEFNRI PDQLYDVEAVAVGLEGVFALAKGLILGDINNVLSNRDYRFTVFFGYPIRSWETEARIQFDADAPNRHYTVIMGRGDSPVP DVPFMLAQSSDVYAILTLEPLRTDTGPDVSPNNAKRWVVTPWVALSIVPLLLSRRSSR >Mature_618_residues MRGPWIPALALLITLIGSTSAAPTVVLDESHLVVFKVPDANGQVVEKGAGDNPGYRVPPGDSGNYGGYKFPACAYWVPYF SLLSYEDADGRIHVFPAVTRGSQLGVMGIADHVINEVLPSSPRIEVDLSSGTPDPLELFTALGYSHLVLIVSEYDSLAIS SALALKWKAVEDLRRRLPEAAEHPEKVGVVIALMARATVISPTETKDVLIPLVPGAHVINPASPFTWQGVENDPFYRLCV NSDLIVVVYKTEAFREEARLVFGDDAIYVRASADITAGAPAVIFNVPRRAESWRVAQTFEPWPSSLYLGALYGLPIAWAA EDLRLTGYSWEGVILVPSPAESGMYWDITSEFDEVLPEILGANPHIFLSYMTLTDPWNNSIQVGTPNFYAALPCLGHYPW DLIGVDLTTSTLLFDLKDYLVVTYNRIPEGNDQELGWGLVGPYAVVFEGPKGRPLILTWYALASGFCEWAWNRYLEFNRI PDQLYDVEAVAVGLEGVFALAKGLILGDINNVLSNRDYRFTVFFGYPIRSWETEARIQFDADAPNRHYTVIMGRGDSPVP DVPFMLAQSSDVYAILTLEPLRTDTGPDVSPNNAKRWVVTPWVALSIVPLLLSRRSSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68155; Mature: 68155
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGPWIPALALLITLIGSTSAAPTVVLDESHLVVFKVPDANGQVVEKGAGDNPGYRVPPG CCCCCHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCEEECCCCCCCCEECCCC DSGNYGGYKFPACAYWVPYFSLLSYEDADGRIHVFPAVTRGSQLGVMGIADHVINEVLPS CCCCCCCEECCHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCC SPRIEVDLSSGTPDPLELFTALGYSHLVLIVSEYDSLAISSALALKWKAVEDLRRRLPEA CCCEEEEECCCCCCHHHHHHHCCCEEEEEEEECCCCHHHHHHHHEEHHHHHHHHHHCCHH AEHPEKVGVVIALMARATVISPTETKDVLIPLVPGAHVINPASPFTWQGVENDPFYRLCV HCCHHHHHHHEEEEHHHEEECCCCCCCEEEEECCCCEEECCCCCCEECCCCCCCEEEEEE NSDLIVVVYKTEAFREEARLVFGDDAIYVRASADITAGAPAVIFNVPRRAESWRVAQTFE CCCEEEEEEECHHHHCCCCEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCEEEECCC PWPSSLYLGALYGLPIAWAAEDLRLTGYSWEGVILVPSPAESGMYWDITSEFDEVLPEIL CCCCCEEHHHHHCCCEEEECCCEEEECCCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHH GANPHIFLSYMTLTDPWNNSIQVGTPNFYAALPCLGHYPWDLIGVDLTTSTLLFDLKDYL CCCCEEEEEEEEEECCCCCCEEECCCCCEEECCCCCCCCCEEEEEEEEHHHHHHCCCCEE VVTYNRIPEGNDQELGWGLVGPYAVVFEGPKGRPLILTWYALASGFCEWAWNRYLEFNRI EEEEECCCCCCCCCCCCCEECCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCEEECCC PDQLYDVEAVAVGLEGVFALAKGLILGDINNVLSNRDYRFTVFFGYPIRSWETEARIQFD CHHHHCHHHEEECHHHHHHHHCCEEEECHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEC ADAPNRHYTVIMGRGDSPVPDVPFMLAQSSDVYAILTLEPLRTDTGPDVSPNNAKRWVVT CCCCCCEEEEEEECCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEE PWVALSIVPLLLSRRSSR CHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRGPWIPALALLITLIGSTSAAPTVVLDESHLVVFKVPDANGQVVEKGAGDNPGYRVPPG CCCCCHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCEEECCCCCCCCEECCCC DSGNYGGYKFPACAYWVPYFSLLSYEDADGRIHVFPAVTRGSQLGVMGIADHVINEVLPS CCCCCCCEECCHHHHHHHHHHHHEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCC SPRIEVDLSSGTPDPLELFTALGYSHLVLIVSEYDSLAISSALALKWKAVEDLRRRLPEA CCCEEEEECCCCCCHHHHHHHCCCEEEEEEEECCCCHHHHHHHHEEHHHHHHHHHHCCHH AEHPEKVGVVIALMARATVISPTETKDVLIPLVPGAHVINPASPFTWQGVENDPFYRLCV HCCHHHHHHHEEEEHHHEEECCCCCCCEEEEECCCCEEECCCCCCEECCCCCCCEEEEEE NSDLIVVVYKTEAFREEARLVFGDDAIYVRASADITAGAPAVIFNVPRRAESWRVAQTFE CCCEEEEEEECHHHHCCCCEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCEEEECCC PWPSSLYLGALYGLPIAWAAEDLRLTGYSWEGVILVPSPAESGMYWDITSEFDEVLPEIL CCCCCEEHHHHHCCCEEEECCCEEEECCCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHH GANPHIFLSYMTLTDPWNNSIQVGTPNFYAALPCLGHYPWDLIGVDLTTSTLLFDLKDYL CCCCEEEEEEEEEECCCCCCEEECCCCCEEECCCCCCCCCEEEEEEEEHHHHHHCCCCEE VVTYNRIPEGNDQELGWGLVGPYAVVFEGPKGRPLILTWYALASGFCEWAWNRYLEFNRI EEEEECCCCCCCCCCCCCEECCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCEEECCC PDQLYDVEAVAVGLEGVFALAKGLILGDINNVLSNRDYRFTVFFGYPIRSWETEARIQFD CHHHHCHHHEEECHHHHHHHHCCEEEECHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEC ADAPNRHYTVIMGRGDSPVPDVPFMLAQSSDVYAILTLEPLRTDTGPDVSPNNAKRWVVT CCCCCCEEEEEEECCCCCCCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEE PWVALSIVPLLLSRRSSR CHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA