| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093676
Identifier: 20093676
GI number: 20093676
Start: 221605
End: 223494
Strand: Reverse
Name: 20093676
Synonym: MK0236
Alternate gene names: NA
Gene position: 223494-221605 (Counterclockwise)
Preceding gene: 20093677
Following gene: 20093675
Centisome position: 13.19
GC content: 61.38
Gene sequence:
>1890_bases ATGGGTCGCCTTGTCGATAGTACCGCTGTTACTGTCGCGGCGCTCCTCGCGCTGATCGTTCCAGTGAACGCCCACGTCTA CGTCGTGGTGAACGTCCCGGATCAGGTACACACCAAATACCATTGGATGAGGGTCTTCGTCACGGCGGCGTCGCTGGATC GGGAGTGGGCCGGCGGTAACGCCGCCTCGGTCATCCCGATAGCGGTCCAGGGTAAGCTTGACAAACTCACGCAGAACCTC ATGTCCGAAGTCGGGCCGTCCAGCGTCGTGCTCACGTACAAGTATCCCGCCACCCACCCGGGCTGGGAGCGGCTTCCGGA CGACCTTGAGGCGGCCTGCGTCCGGCTCGTGGAAGTGGCGATGAACTCCGGGGTCCCAGTGAAGTTCCTCCTCTGTTTAG ACTCCGATGCGGGCTTCATCCCCGGGCTGGAGCTGGCGCCCATAGTGGCGAAGCAGCAGGGCGCCGTCGTCTGGGGTAAC CCCCTGACGTACATGACACATTTCGACGTCCCGGTGCTCACGCTGGACGAGTACCTCCGGAACCCGGAGTACGACTTCAG CGACTTGTCGATCAGGGCCCTCGCCGTCGTCCAACCGCTCGCGAAACCGGAAGGTCCCTACAAGTCCCAACCGTTCGACC CGATCACCCTGGCCGCCGTACAGTTCGCCTGCATGAGACCGGCGTTGGTAGCGTTCGTCACGGTGGGTGGATCACTGAAC GTCGACACGCTGAAACAGGACGTGCGGGATAGGTTTCTCTCCGCGTACGGTAAGGAGCTGAAAGGTCTCGACGACGTCGA GTACGTGGTGTCCTTCGGATCGGTGCTACTAGGTAGTCCGAAGTTCGACGTAGGTGTAGCATGTTTCCCGTTCCACGGTC TCCCGGGGTTCTTGGCGGCCAACAGGATGCTGGTCTCGATGCATCTCCACGGTGAGGCATCTCCGTTGGTAGTCTTCGAT CCCACCGGGTCATTATCGGCTTACTACGGTGACATCCAGCACTCGGTAACCGTCAAGTGGCTGTCAGTTCCTGATGTTAA TTCCCTCAACCTGAAGAACCAGAAGTTCGCGGCCGGGATCGTCGTGTTCAAAGAAGCGCTGGGACAGAACTTCCTCCAGT CACTCAACTCAGAGTGCAATTCCTTCCTGTTCATCTGCGCCGATCCCAACTCGATCGCGCAGAGAGTAGACGTGTACGCG ACCCCTAACGGTTTTCCCAAGTTCCGCGCGGTCATCGCCTTCCGGGATCCGGCGGGCGCCATCATGGCGTACCTCTTCGC GGCCTCCGGCGTCGAACTGGGGCGGGCCGTGGTATGGGCGTGCTGGGAGCTGGAGCAGCTCCGAGGCTACGTCGACGTTA GTCCGGGTTACTTACTCGTGGGCGACCCGTTCTATCGGTTCGAGGGACCGTTCGAGTACCCGCTCCCGAACCTCCCGGAG GGGAAGGACCTGAACGTTAAGCTGCCCCGCGCGTTCCTGGTACCCGCAGATAAGTACAGGCTCGTTCCGCTGATCTTTCC GGCGTTCGTGACCGGACTGACGAAGATACCGAAGGACCCCTACTCGACGGTGCTCGCCGATGGGCTCAACTTCGTGGCCA AGCGCCTGGGTCCGAACCGGTACTCAGTCAGCGGGATCCTGATACACCCGTCCGGGATCAGGAACGCGTACGTACTACCA TTGAACGAATCCGATAAGTACCATGTCACGGTCACGCTGGAGCTCGTCACGCCACAGCCCTCTCCGCCGGCCTCCTGGCG GAAGGTTCCGGGGGTATCGGTTTGCGGGATCGCGGTCACGTTAGCGTCGTTGCTGGTGGTCAGTGGGGCGACGAGGGCAA GGGCAAGATCGTGGCGTACCTCGCGGTCCAGGACGAGCCGGAGGTCATAG
Upstream 100 bases:
>100_bases AGTCGAGCGACGTCTACGCGATCCTGACCCTGGAACCGCTCCGTACGGACACAGGTCCCGACGTCAGTCCGAACAACGCT AAACGGTGGGTGGTGACCCC
Downstream 100 bases:
>100_bases CGCGGGCCGGTGTCGGTCCCAACGCCGGCCACACCGTGCGCGTGAATGGGGAGGATTACGGCCTCCGGCAGATCCCGTGC GGCTTCCCACACGAGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 629; Mature: 628
Protein sequence:
>629_residues MGRLVDSTAVTVAALLALIVPVNAHVYVVVNVPDQVHTKYHWMRVFVTAASLDREWAGGNAASVIPIAVQGKLDKLTQNL MSEVGPSSVVLTYKYPATHPGWERLPDDLEAACVRLVEVAMNSGVPVKFLLCLDSDAGFIPGLELAPIVAKQQGAVVWGN PLTYMTHFDVPVLTLDEYLRNPEYDFSDLSIRALAVVQPLAKPEGPYKSQPFDPITLAAVQFACMRPALVAFVTVGGSLN VDTLKQDVRDRFLSAYGKELKGLDDVEYVVSFGSVLLGSPKFDVGVACFPFHGLPGFLAANRMLVSMHLHGEASPLVVFD PTGSLSAYYGDIQHSVTVKWLSVPDVNSLNLKNQKFAAGIVVFKEALGQNFLQSLNSECNSFLFICADPNSIAQRVDVYA TPNGFPKFRAVIAFRDPAGAIMAYLFAASGVELGRAVVWACWELEQLRGYVDVSPGYLLVGDPFYRFEGPFEYPLPNLPE GKDLNVKLPRAFLVPADKYRLVPLIFPAFVTGLTKIPKDPYSTVLADGLNFVAKRLGPNRYSVSGILIHPSGIRNAYVLP LNESDKYHVTVTLELVTPQPSPPASWRKVPGVSVCGIAVTLASLLVVSGATRARARSWRTSRSRTSRRS
Sequences:
>Translated_629_residues MGRLVDSTAVTVAALLALIVPVNAHVYVVVNVPDQVHTKYHWMRVFVTAASLDREWAGGNAASVIPIAVQGKLDKLTQNL MSEVGPSSVVLTYKYPATHPGWERLPDDLEAACVRLVEVAMNSGVPVKFLLCLDSDAGFIPGLELAPIVAKQQGAVVWGN PLTYMTHFDVPVLTLDEYLRNPEYDFSDLSIRALAVVQPLAKPEGPYKSQPFDPITLAAVQFACMRPALVAFVTVGGSLN VDTLKQDVRDRFLSAYGKELKGLDDVEYVVSFGSVLLGSPKFDVGVACFPFHGLPGFLAANRMLVSMHLHGEASPLVVFD PTGSLSAYYGDIQHSVTVKWLSVPDVNSLNLKNQKFAAGIVVFKEALGQNFLQSLNSECNSFLFICADPNSIAQRVDVYA TPNGFPKFRAVIAFRDPAGAIMAYLFAASGVELGRAVVWACWELEQLRGYVDVSPGYLLVGDPFYRFEGPFEYPLPNLPE GKDLNVKLPRAFLVPADKYRLVPLIFPAFVTGLTKIPKDPYSTVLADGLNFVAKRLGPNRYSVSGILIHPSGIRNAYVLP LNESDKYHVTVTLELVTPQPSPPASWRKVPGVSVCGIAVTLASLLVVSGATRARARSWRTSRSRTSRRS >Mature_628_residues GRLVDSTAVTVAALLALIVPVNAHVYVVVNVPDQVHTKYHWMRVFVTAASLDREWAGGNAASVIPIAVQGKLDKLTQNLM SEVGPSSVVLTYKYPATHPGWERLPDDLEAACVRLVEVAMNSGVPVKFLLCLDSDAGFIPGLELAPIVAKQQGAVVWGNP LTYMTHFDVPVLTLDEYLRNPEYDFSDLSIRALAVVQPLAKPEGPYKSQPFDPITLAAVQFACMRPALVAFVTVGGSLNV DTLKQDVRDRFLSAYGKELKGLDDVEYVVSFGSVLLGSPKFDVGVACFPFHGLPGFLAANRMLVSMHLHGEASPLVVFDP TGSLSAYYGDIQHSVTVKWLSVPDVNSLNLKNQKFAAGIVVFKEALGQNFLQSLNSECNSFLFICADPNSIAQRVDVYAT PNGFPKFRAVIAFRDPAGAIMAYLFAASGVELGRAVVWACWELEQLRGYVDVSPGYLLVGDPFYRFEGPFEYPLPNLPEG KDLNVKLPRAFLVPADKYRLVPLIFPAFVTGLTKIPKDPYSTVLADGLNFVAKRLGPNRYSVSGILIHPSGIRNAYVLPL NESDKYHVTVTLELVTPQPSPPASWRKVPGVSVCGIAVTLASLLVVSGATRARARSWRTSRSRTSRRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68523; Mature: 68392
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLVDSTAVTVAALLALIVPVNAHVYVVVNVPDQVHTKYHWMRVFVTAASLDREWAGGN CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHEEEEEEEEHHHCCCCCCCCC AASVIPIAVQGKLDKLTQNLMSEVGPSSVVLTYKYPATHPGWERLPDDLEAACVRLVEVA CCEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHH MNSGVPVKFLLCLDSDAGFIPGLELAPIVAKQQGAVVWGNPLTYMTHFDVPVLTLDEYLR HCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCEEECCCEEEEEECCCCEEEHHHHHC NPEYDFSDLSIRALAVVQPLAKPEGPYKSQPFDPITLAAVQFACMRPALVAFVTVGGSLN CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCC VDTLKQDVRDRFLSAYGKELKGLDDVEYVVSFGSVLLGSPKFDVGVACFPFHGLPGFLAA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHH NRMLVSMHLHGEASPLVVFDPTGSLSAYYGDIQHSVTVKWLSVPDVNSLNLKNQKFAAGI CEEEEEEEECCCCCCEEEECCCCCCCCEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHH VVFKEALGQNFLQSLNSECNSFLFICADPNSIAQRVDVYATPNGFPKFRAVIAFRDPAGA HHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHEEEEECCCCCCCEEEEEEEECCHHH IMAYLFAASGVELGRAVVWACWELEQLRGYVDVSPGYLLVGDPFYRFEGPFEYPLPNLPE HHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEECCCCEEEECCCCEECCCCCCCCCCCCCC GKDLNVKLPRAFLVPADKYRLVPLIFPAFVTGLTKIPKDPYSTVLADGLNFVAKRLGPNR CCCCEEECCEEEECCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC YSVSGILIHPSGIRNAYVLPLNESDKYHVTVTLELVTPQPSPPASWRKVPGVSVCGIAVT EEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCCCCCHHCCCCCCHHHHHHH LASLLVVSGATRARARSWRTSRSRTSRRS HHHHHHHCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GRLVDSTAVTVAALLALIVPVNAHVYVVVNVPDQVHTKYHWMRVFVTAASLDREWAGGN CCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHEEEEEEEEHHHCCCCCCCCC AASVIPIAVQGKLDKLTQNLMSEVGPSSVVLTYKYPATHPGWERLPDDLEAACVRLVEVA CCEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHH MNSGVPVKFLLCLDSDAGFIPGLELAPIVAKQQGAVVWGNPLTYMTHFDVPVLTLDEYLR HCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCEEECCCEEEEEECCCCEEEHHHHHC NPEYDFSDLSIRALAVVQPLAKPEGPYKSQPFDPITLAAVQFACMRPALVAFVTVGGSLN CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCC VDTLKQDVRDRFLSAYGKELKGLDDVEYVVSFGSVLLGSPKFDVGVACFPFHGLPGFLAA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHH NRMLVSMHLHGEASPLVVFDPTGSLSAYYGDIQHSVTVKWLSVPDVNSLNLKNQKFAAGI CEEEEEEEECCCCCCEEEECCCCCCCCEECCCCEEEEEEEEECCCCCCCCCCCCHHHHHH VVFKEALGQNFLQSLNSECNSFLFICADPNSIAQRVDVYATPNGFPKFRAVIAFRDPAGA HHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHEEEEECCCCCCCEEEEEEEECCHHH IMAYLFAASGVELGRAVVWACWELEQLRGYVDVSPGYLLVGDPFYRFEGPFEYPLPNLPE HHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEECCCCEEEECCCCEECCCCCCCCCCCCCC GKDLNVKLPRAFLVPADKYRLVPLIFPAFVTGLTKIPKDPYSTVLADGLNFVAKRLGPNR CCCCEEECCEEEECCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC YSVSGILIHPSGIRNAYVLPLNESDKYHVTVTLELVTPQPSPPASWRKVPGVSVCGIAVT EEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCCCCCHHCCCCCCHHHHHHH LASLLVVSGATRARARSWRTSRSRTSRRS HHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA