| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093671
Identifier: 20093671
GI number: 20093671
Start: 217222
End: 217764
Strand: Reverse
Name: 20093671
Synonym: MK0231
Alternate gene names: NA
Gene position: 217764-217222 (Counterclockwise)
Preceding gene: 20093675
Following gene: 20093667
Centisome position: 12.85
GC content: 60.77
Gene sequence:
>543_bases ATGGCAGAGAGCGTGAAGGAGGTAATCGACCTCACGGAGATCCCGTTCCAGCCCATGGATCGGCAGGAGATCCACCAGCT GGAGACGGTGCTGCTGGTGGCCACGCTCTTCCGTCCGAAGGTGCTGGAGATGATCCACGAGCAGAAGTTCCTGACTTGGG TCGACTCGCTAGCGGTGGCCGCGTCGGCCCTCGCGAGACAGAAGGCGGGGTACACGATATCGGAGATCGCCGAGGAGCTG GGACGTACCGAGGCCACGATCAGGAAGCACCTACAGGGGGAGACTAAGGCGGGAGAGCTCGTCCTGGAGACCTACGAGAT GCTCAAGAGCGGGGAGCTTCAGATAGTCACCGGCGTTGAGGACATCAAGGAGAAACTCAGGGTGGAGGAGGAGAAGGTGG AGCGACTGAAGTCCGAGATGGAGGAAGTTTCCACCACCATCTCTCGAGTCGTGGAGGGCCTGAGGGAGTGCTGCACTAAG ATGGAGGACGCCCTCGAAGAGCTGGAGGGCCTCGCGGAGAAGCTCGAGGAACTCAAGGAGTAG
Upstream 100 bases:
>100_bases GCGAATCGAACTTGACGAACAAGGCTCCGTCGCCCCTTGAGGTTCTGTTTCTTAGAGTTTAAATAGCCGGATCCCTCCTT ATATTGAGGGTGCATCAAGT
Downstream 100 bases:
>100_bases AGCGTAACCCCAGAAGTCTCTTCCGGAGTCCCTCCAGGTAACGTTCGACTTTCTCCTCACTCACCGGCTTCTTCCAAGAG CCCGCCAGCATGCACTTGGG
Product: transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MAESVKEVIDLTEIPFQPMDRQEIHQLETVLLVATLFRPKVLEMIHEQKFLTWVDSLAVAASALARQKAGYTISEIAEEL GRTEATIRKHLQGETKAGELVLETYEMLKSGELQIVTGVEDIKEKLRVEEEKVERLKSEMEEVSTTISRVVEGLRECCTK MEDALEELEGLAEKLEELKE
Sequences:
>Translated_180_residues MAESVKEVIDLTEIPFQPMDRQEIHQLETVLLVATLFRPKVLEMIHEQKFLTWVDSLAVAASALARQKAGYTISEIAEEL GRTEATIRKHLQGETKAGELVLETYEMLKSGELQIVTGVEDIKEKLRVEEEKVERLKSEMEEVSTTISRVVEGLRECCTK MEDALEELEGLAEKLEELKE >Mature_179_residues AESVKEVIDLTEIPFQPMDRQEIHQLETVLLVATLFRPKVLEMIHEQKFLTWVDSLAVAASALARQKAGYTISEIAEELG RTEATIRKHLQGETKAGELVLETYEMLKSGELQIVTGVEDIKEKLRVEEEKVERLKSEMEEVSTTISRVVEGLRECCTKM EDALEELEGLAEKLEELKE
Specific function: Unknown
COG id: COG1318
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022285 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20473; Mature: 20342
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESVKEVIDLTEIPFQPMDRQEIHQLETVLLVATLFRPKVLEMIHEQKFLTWVDSLAVA CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASALARQKAGYTISEIAEELGRTEATIRKHLQGETKAGELVLETYEMLKSGELQIVTGVE HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECHH DIKEKLRVEEEKVERLKSEMEEVSTTISRVVEGLRECCTKMEDALEELEGLAEKLEELKE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AESVKEVIDLTEIPFQPMDRQEIHQLETVLLVATLFRPKVLEMIHEQKFLTWVDSLAVA CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASALARQKAGYTISEIAEELGRTEATIRKHLQGETKAGELVLETYEMLKSGELQIVTGVE HHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECHH DIKEKLRVEEEKVERLKSEMEEVSTTISRVVEGLRECCTKMEDALEELEGLAEKLEELKE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]