| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093652
Identifier: 20093652
GI number: 20093652
Start: 203539
End: 204414
Strand: Reverse
Name: 20093652
Synonym: MK0212
Alternate gene names: NA
Gene position: 204414-203539 (Counterclockwise)
Preceding gene: 20093653
Following gene: 20093651
Centisome position: 12.06
GC content: 58.9
Gene sequence:
>876_bases TTGGTGCTCGAGCGGATCGGACGGTTCGTGTGGAAGTTCACCGCCGCCGTCGGTTACGTGACCGTGAACTTGCCTTGGAT AGTAGTGAAGCTGCTTAAAGAGGGCCCGAAACGCTCCGCTAAATTCACCTCGCAGCTCATCAGGACGGCCGAGGAGTCCG CGTCCAAGTTCCAGACGGTTATGGAAATGGTGAGAGAGGGTCAGGTACTGCTACCGGAGCTGCCCCAAGTACCCTTCAAA GATATAGAGATACGCGGTAAGCGGATCGCGGCGGCTCCTAGAATGCCGTGGGACGTGCCCGTCTTAGTGCTGCAGTTTTC CCTCCTCGCGACCGTAGTGTTCGTAATCTTGGAGGAAATCGTAGCACCGCCCGTAATGTTATGGGAAGCTTTGGCCGTGA TCTCGGCGTTCGTTACGGCCTTCAGTCTCGGATGGCTCCGCCGCGTCTCACCTTCAGAGGACATCCACTGGCTACCGTAC TGGCATTCCACACTCATTATCTTGGGGTCCGTCGTACTGTCCGCAATACTGACGAACGTACCTCCGGTGGTAGCGCTCGT CCTGCCGCTTGAGGGAGTCTTACCCGGGTTTATAGTGTTCGGGTTACCGGCCCTAGGAGTAGCGGCGGCTACGGTTTGGG TGAGGAGGAAGTTCCATCGGACCTGGACCTTCGGGGTCGTGCTCAGGGAGGTCCAGGAAGGAGGCAGCGTTGAGGTAGTG GTCGGTCACGACATCGCCGCGAACACGCTTCCTGGAGAGTATATAGTCGAGGGGAGTGGCTCCGAGGGCACTCCGGTGCT CGTAGAGGTGGAGCACAGCGGCTTCTCACTCACAGGGGCGAGACCGGTGCGCATCCTGAAGGAGGGGTGGTGGTGA
Upstream 100 bases:
>100_bases TACGAGGAATCGGACAACGTGGCCTCTGCCGCCGAAGTACTAGGGAAGGAGGAGCGCCTGCTCGAAGCCTACCGCGATGA GCTCAGCGGGGAGGAATGAC
Downstream 100 bases:
>100_bases CCCTCGGCCAGCCATCCTCTCCCCATAATAGCGTTCGGCTAACAGCTCACTCGTCATCGGGGGGTCCACGTTGACACGCG TTGAGAGGCTCGAAGAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MVLERIGRFVWKFTAAVGYVTVNLPWIVVKLLKEGPKRSAKFTSQLIRTAEESASKFQTVMEMVREGQVLLPELPQVPFK DIEIRGKRIAAAPRMPWDVPVLVLQFSLLATVVFVILEEIVAPPVMLWEALAVISAFVTAFSLGWLRRVSPSEDIHWLPY WHSTLIILGSVVLSAILTNVPPVVALVLPLEGVLPGFIVFGLPALGVAAATVWVRRKFHRTWTFGVVLREVQEGGSVEVV VGHDIAANTLPGEYIVEGSGSEGTPVLVEVEHSGFSLTGARPVRILKEGWW
Sequences:
>Translated_291_residues MVLERIGRFVWKFTAAVGYVTVNLPWIVVKLLKEGPKRSAKFTSQLIRTAEESASKFQTVMEMVREGQVLLPELPQVPFK DIEIRGKRIAAAPRMPWDVPVLVLQFSLLATVVFVILEEIVAPPVMLWEALAVISAFVTAFSLGWLRRVSPSEDIHWLPY WHSTLIILGSVVLSAILTNVPPVVALVLPLEGVLPGFIVFGLPALGVAAATVWVRRKFHRTWTFGVVLREVQEGGSVEVV VGHDIAANTLPGEYIVEGSGSEGTPVLVEVEHSGFSLTGARPVRILKEGWW >Mature_291_residues MVLERIGRFVWKFTAAVGYVTVNLPWIVVKLLKEGPKRSAKFTSQLIRTAEESASKFQTVMEMVREGQVLLPELPQVPFK DIEIRGKRIAAAPRMPWDVPVLVLQFSLLATVVFVILEEIVAPPVMLWEALAVISAFVTAFSLGWLRRVSPSEDIHWLPY WHSTLIILGSVVLSAILTNVPPVVALVLPLEGVLPGFIVFGLPALGVAAATVWVRRKFHRTWTFGVVLREVQEGGSVEVV VGHDIAANTLPGEYIVEGSGSEGTPVLVEVEHSGFSLTGARPVRILKEGWW
Specific function: Unknown
COG id: COG4025
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32099; Mature: 32099
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLERIGRFVWKFTAAVGYVTVNLPWIVVKLLKEGPKRSAKFTSQLIRTAEESASKFQTV CHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH MEMVREGQVLLPELPQVPFKDIEIRGKRIAAAPRMPWDVPVLVLQFSLLATVVFVILEEI HHHHHCCCEECCCCCCCCCCCCEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAPPVMLWEALAVISAFVTAFSLGWLRRVSPSEDIHWLPYWHSTLIILGSVVLSAILTNV HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCC PPVVALVLPLEGVLPGFIVFGLPALGVAAATVWVRRKFHRTWTFGVVLREVQEGGSVEVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE VGHDIAANTLPGEYIVEGSGSEGTPVLVEVEHSGFSLTGARPVRILKEGWW ECCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCEEECCCCHHHHHHCCCC >Mature Secondary Structure MVLERIGRFVWKFTAAVGYVTVNLPWIVVKLLKEGPKRSAKFTSQLIRTAEESASKFQTV CHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH MEMVREGQVLLPELPQVPFKDIEIRGKRIAAAPRMPWDVPVLVLQFSLLATVVFVILEEI HHHHHCCCEECCCCCCCCCCCCEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAPPVMLWEALAVISAFVTAFSLGWLRRVSPSEDIHWLPYWHSTLIILGSVVLSAILTNV HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCC PPVVALVLPLEGVLPGFIVFGLPALGVAAATVWVRRKFHRTWTFGVVLREVQEGGSVEVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE VGHDIAANTLPGEYIVEGSGSEGTPVLVEVEHSGFSLTGARPVRILKEGWW ECCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCEEECCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA