| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20093651
Identifier: 20093651
GI number: 20093651
Start: 202797
End: 203468
Strand: Reverse
Name: 20093651
Synonym: MK0211
Alternate gene names: NA
Gene position: 203468-202797 (Counterclockwise)
Preceding gene: 20093652
Following gene: 20093650
Centisome position: 12.0
GC content: 61.31
Gene sequence:
>672_bases TTGACACGCGTTGAGAGGCTCGAAGAACTCCTCAGTCACGCTGTCTCCCAGCGGTCAGGACGTATAAGGGTTGTCACGGA CGTCGACGAGCTTCGGCTGGACGAAGAGGTCGTCCGGAGGATCGTTCACCGAGCCGCGGAGCTGGACCACGCACTGGTCG AGTCCGCTCCGGAACACGTGCTACGCGGCGAGCGGGCTCAGGAGGTAGCCAGAGCGTTGGACGATATTTTACGATCAGTT CTAGAGCTCGTCGGCGTCGAGGAGGAGACGGAGCGCGACCTAGACGACTTGTTCAAGGACTCCGTGCTGGTGGTGGTAAG GGGGCGAGAGCGTAAAGCCCTGAGGGAGCTCGTAGACGCTCCGATCGTGCAGACCGGAGGGCCGCTAGTGCCGGAGGACT ATCGGAAGGTGAACCCTAACTTGCCTGAAAAACTACCCGAGGGGCTCGTGAAATCCGTCGAGCGGGCCCGAAGGGAGCTC GAAGAATACATCCGGAAGTCCGGCGCCAAACGCATCGTCCTAGTGCGCGAAGAGGACGACCGCGTCGGCGAAGTCCTCGA GGAGGAGTTACCCGAAGTGGCCGAGGAACTCGGGGTCGACCACGAGGTGATCGTCGTCCCGGACTTCACAGAATTATCGC CGTCCGACTTGCTGTCGGGGAGGACGAAATGA
Upstream 100 bases:
>100_bases GTGCGCATCCTGAAGGAGGGGTGGTGGTGACCCTCGGCCAGCCATCCTCTCCCCATAATAGCGTTCGGCTAACAGCTCAC TCGTCATCGGGGGGTCCACG
Downstream 100 bases:
>100_bases GCGATACCGAAACTATCGAGACGCCTTCGGGCGAGCGGCCACTGCTACCACCGAAGGCTCGCTTGACGTTCTCGCGTACG ATGCCCGCCGCGCTGCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTRVERLEELLSHAVSQRSGRIRVVTDVDELRLDEEVVRRIVHRAAELDHALVESAPEHVLRGERAQEVARALDDILRSV LELVGVEEETERDLDDLFKDSVLVVVRGRERKALRELVDAPIVQTGGPLVPEDYRKVNPNLPEKLPEGLVKSVERARREL EEYIRKSGAKRIVLVREEDDRVGEVLEEELPEVAEELGVDHEVIVVPDFTELSPSDLLSGRTK
Sequences:
>Translated_223_residues MTRVERLEELLSHAVSQRSGRIRVVTDVDELRLDEEVVRRIVHRAAELDHALVESAPEHVLRGERAQEVARALDDILRSV LELVGVEEETERDLDDLFKDSVLVVVRGRERKALRELVDAPIVQTGGPLVPEDYRKVNPNLPEKLPEGLVKSVERARREL EEYIRKSGAKRIVLVREEDDRVGEVLEEELPEVAEELGVDHEVIVVPDFTELSPSDLLSGRTK >Mature_222_residues TRVERLEELLSHAVSQRSGRIRVVTDVDELRLDEEVVRRIVHRAAELDHALVESAPEHVLRGERAQEVARALDDILRSVL ELVGVEEETERDLDDLFKDSVLVVVRGRERKALRELVDAPIVQTGGPLVPEDYRKVNPNLPEKLPEGLVKSVERARRELE EYIRKSGAKRIVLVREEDDRVGEVLEEELPEVAEELGVDHEVIVVPDFTELSPSDLLSGRTK
Specific function: Unknown
COG id: COG4024
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25348; Mature: 25217
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVERLEELLSHAVSQRSGRIRVVTDVDELRLDEEVVRRIVHRAAELDHALVESAPEHV CCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LRGERAQEVARALDDILRSVLELVGVEEETERDLDDLFKDSVLVVVRGRERKALRELVDA HCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHC PIVQTGGPLVPEDYRKVNPNLPEKLPEGLVKSVERARRELEEYIRKSGAKRIVLVREEDD CCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCH RVGEVLEEELPEVAEELGVDHEVIVVPDFTELSPSDLLSGRTK HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCHHHHHCCCCC >Mature Secondary Structure TRVERLEELLSHAVSQRSGRIRVVTDVDELRLDEEVVRRIVHRAAELDHALVESAPEHV CHHHHHHHHHHHHHHHCCCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LRGERAQEVARALDDILRSVLELVGVEEETERDLDDLFKDSVLVVVRGRERKALRELVDA HCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHC PIVQTGGPLVPEDYRKVNPNLPEKLPEGLVKSVERARRELEEYIRKSGAKRIVLVREEDD CCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCH RVGEVLEEELPEVAEELGVDHEVIVVPDFTELSPSDLLSGRTK HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA