| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20093577
Identifier: 20093577
GI number: 20093577
Start: 137551
End: 138318
Strand: Reverse
Name: 20093577
Synonym: MK0137
Alternate gene names: NA
Gene position: 138318-137551 (Counterclockwise)
Preceding gene: 20093581
Following gene: 20093576
Centisome position: 8.16
GC content: 57.03
Gene sequence:
>768_bases GTGGTGGCGGTCGCGTTCCCGTGGAGTCTCTTCTCTGAGGAGACCGACCCCAAGATCTACGCTTATCGGGTGGGGACCCT GGCGCGCGCCCTGGCCATATACCGAGTGGAGGAGGTTTACCTATACGGTGACGGCGTCGGAACCCGTAGGAACGCGGAAC GGCTACGGAAGCTCTTAGAGTATCAGGAGTGTCCCCAGTACCTTAGGAAGAGGGTGTTCAGACTGGACCGTGACCTCAGG TACGCCGGAGTCATGCCGCCGTTGAGGGCTCCCCACCATAAGGTCCACTCGCCGAAGGAAGGTGAGGTACGGGAGGGTTA CGTCGTTAGGAGAAGTCGGAACGGAGCGCTCGTAGACGTAGGTGCCGACCGCCTCGCGCGCACCAGATGGCGCTTTAAAC CACACGAACGGGTGACTGTGCGGATCGTCTCCGAGGACCCGCTGGAGGTGGAACCGGCCGAGCCCGAGGAGTACTGGGGG TATCGAGTGAGGATTGTAAATGAGCTTAATGAGGTGTTAAGGGAGTTTAAGGAGGGTATCATTGTGACTTCAAGATACGG TGAAGACGTTCGAGAAGTCGAGTTTAAGAGTCCGGTGAAGTGCCTGGTATTCGGGTCTAGCGAGGTGAGTGTCCTGGACG TAGATCCGGGGGTTCGAGACGAGTATCCGGTGATTAACTTCGTGCCAAATCAAGGGGTGCAGGTAGTGAGAACTGAGGAG GCCGTTCACACCACCCTTGCCGTACTTAACTACTTGGGATTAATATAA
Upstream 100 bases:
>100_bases CCCGCAGCGCGTCCACGACCACTCCTATCTCGTACCCTTCCTGCGGTTCGAGGCCCGACGCCACCCGCAACTCGATCTCC CCCGAAGGGGGCGTTACGTC
Downstream 100 bases:
>100_bases AGACCTCCGCCGGCTCTCCGTCATCACACCGGCCGTCGGCCGGGGATTACCTCGTCATCGGTCCACATGTAAGTCAGTCC GGTAACCGCACGGCGATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MVAVAFPWSLFSEETDPKIYAYRVGTLARALAIYRVEEVYLYGDGVGTRRNAERLRKLLEYQECPQYLRKRVFRLDRDLR YAGVMPPLRAPHHKVHSPKEGEVREGYVVRRSRNGALVDVGADRLARTRWRFKPHERVTVRIVSEDPLEVEPAEPEEYWG YRVRIVNELNEVLREFKEGIIVTSRYGEDVREVEFKSPVKCLVFGSSEVSVLDVDPGVRDEYPVINFVPNQGVQVVRTEE AVHTTLAVLNYLGLI
Sequences:
>Translated_255_residues MVAVAFPWSLFSEETDPKIYAYRVGTLARALAIYRVEEVYLYGDGVGTRRNAERLRKLLEYQECPQYLRKRVFRLDRDLR YAGVMPPLRAPHHKVHSPKEGEVREGYVVRRSRNGALVDVGADRLARTRWRFKPHERVTVRIVSEDPLEVEPAEPEEYWG YRVRIVNELNEVLREFKEGIIVTSRYGEDVREVEFKSPVKCLVFGSSEVSVLDVDPGVRDEYPVINFVPNQGVQVVRTEE AVHTTLAVLNYLGLI >Mature_255_residues MVAVAFPWSLFSEETDPKIYAYRVGTLARALAIYRVEEVYLYGDGVGTRRNAERLRKLLEYQECPQYLRKRVFRLDRDLR YAGVMPPLRAPHHKVHSPKEGEVREGYVVRRSRNGALVDVGADRLARTRWRFKPHERVTVRIVSEDPLEVEPAEPEEYWG YRVRIVNELNEVLREFKEGIIVTSRYGEDVREVEFKSPVKCLVFGSSEVSVLDVDPGVRDEYPVINFVPNQGVQVVRTEE AVHTTLAVLNYLGLI
Specific function: Unknown
COG id: COG2106
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI38679912, Length=297, Percent_Identity=32.996632996633, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17551846, Length=264, Percent_Identity=29.1666666666667, Blast_Score=90, Evalue=9e-19, Organism=Drosophila melanogaster, GI20129839, Length=290, Percent_Identity=30, Blast_Score=104, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003750 [H]
Pfam domain/function: PF02598 DUF171 [H]
EC number: NA
Molecular weight: Translated: 29504; Mature: 29504
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAVAFPWSLFSEETDPKIYAYRVGTLARALAIYRVEEVYLYGDGVGTRRNAERLRKLLE CEEEEECHHHHCCCCCCEEEEEEHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHH YQECPQYLRKRVFRLDRDLRYAGVMPPLRAPHHKVHSPKEGEVREGYVVRRSRNGALVDV HHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEC GADRLARTRWRFKPHERVTVRIVSEDPLEVEPAEPEEYWGYRVRIVNELNEVLREFKEGI CHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCEEHHHHHHHHHHHHHCCE IVTSRYGEDVREVEFKSPVKCLVFGSSEVSVLDVDPGVRDEYPVINFVPNQGVQVVRTEE EEEECCCCHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCEEEEEHHH AVHTTLAVLNYLGLI HHHHHHHHHHHHCCC >Mature Secondary Structure MVAVAFPWSLFSEETDPKIYAYRVGTLARALAIYRVEEVYLYGDGVGTRRNAERLRKLLE CEEEEECHHHHCCCCCCEEEEEEHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHH YQECPQYLRKRVFRLDRDLRYAGVMPPLRAPHHKVHSPKEGEVREGYVVRRSRNGALVDV HHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEC GADRLARTRWRFKPHERVTVRIVSEDPLEVEPAEPEEYWGYRVRIVNELNEVLREFKEGI CHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCEEHHHHHHHHHHHHHCCE IVTSRYGEDVREVEFKSPVKCLVFGSSEVSVLDVDPGVRDEYPVINFVPNQGVQVVRTEE EEEECCCCHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCEEEEEHHH AVHTTLAVLNYLGLI HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2406244 [H]