| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is SerB [C]
Identifier: 20093561
GI number: 20093561
Start: 115299
End: 115952
Strand: Reverse
Name: SerB [C]
Synonym: MK0121
Alternate gene names: 20093561
Gene position: 115952-115299 (Counterclockwise)
Preceding gene: 20093562
Following gene: 20093560
Centisome position: 6.84
GC content: 61.77
Gene sequence:
>654_bases ATGGCCCAGGCTCGCCGACTGGTAGTGTTAGACTTCGATGGAACGCTGGTCGATGGGGAGACCATCGATCTAATCGCGGA GGCGGCCGGAGTCGACGATGAAGTCGAAGAGATCACGAGACGGGCGATGCGCGGTGAGCTCGAGTTCGGAGAGGCCCTCC GGGAACGGGTCCGGTTACTGGCCGGTACACCCGCCTCCGTTCTCGACGAGGTCGTGACCGAGCTGCGCCTGAACCCCGGC GTCCGGGAATTCGTAGCGGCCGTACGATCCGTGGGAGCCGCCGTAGCGGTGATCAGCGGAGGGTTCACCGAAGTGGTCTC CCATTTCTGTAGAGAACTAGGGTTGGACGCGTACGTGGCCAACGAACTCGAGGTACGGAACGGTTTCCTCACGGGCAGAG TTTACGGCCCCGTCATGAGCTCTTCCGCGAAGGGAAGGGTTCTGATGGAGCTATGCCGCCGGTTCGGCACCCGTCCTGAG GACACCGTGGCGGTCGGAGACGGCGCGAACGACGCATCAATGTTAAAGCGTGTCGGTCTGCCTTTAGGGTTCCGCCCTAA AAAGCCGCTGTACGAGATCATCGAGATGGCGTTCGACGACTTTCGTCGTGCCGTTCCCGTCGTACTGCGCTTCTGGGGTG TTCCCGTCGAATGA
Upstream 100 bases:
>100_bases GTCGCAGGGAGCCGTCCGAGGTCCGGAAGGACGTCGAGGAACTCCGGCGTGAGTTCCAGGAGGTCAAGTACGGGTTCGGG TCGGGAGTGGGTGCCCACGA
Downstream 100 bases:
>100_bases TGCTCTCCGAGGACAAGCTGCAGAAAATCAAGGAGCTCGAAAATCAGCTAGTTAAGACCCGTGAGGAACTCGATGACCTT GAAGAAAAGCGGCAGGAAAT
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MAQARRLVVLDFDGTLVDGETIDLIAEAAGVDDEVEEITRRAMRGELEFGEALRERVRLLAGTPASVLDEVVTELRLNPG VREFVAAVRSVGAAVAVISGGFTEVVSHFCRELGLDAYVANELEVRNGFLTGRVYGPVMSSSAKGRVLMELCRRFGTRPE DTVAVGDGANDASMLKRVGLPLGFRPKKPLYEIIEMAFDDFRRAVPVVLRFWGVPVE
Sequences:
>Translated_217_residues MAQARRLVVLDFDGTLVDGETIDLIAEAAGVDDEVEEITRRAMRGELEFGEALRERVRLLAGTPASVLDEVVTELRLNPG VREFVAAVRSVGAAVAVISGGFTEVVSHFCRELGLDAYVANELEVRNGFLTGRVYGPVMSSSAKGRVLMELCRRFGTRPE DTVAVGDGANDASMLKRVGLPLGFRPKKPLYEIIEMAFDDFRRAVPVVLRFWGVPVE >Mature_216_residues AQARRLVVLDFDGTLVDGETIDLIAEAAGVDDEVEEITRRAMRGELEFGEALRERVRLLAGTPASVLDEVVTELRLNPGV REFVAAVRSVGAAVAVISGGFTEVVSHFCRELGLDAYVANELEVRNGFLTGRVYGPVMSSSAKGRVLMELCRRFGTRPED TVAVGDGANDASMLKRVGLPLGFRPKKPLYEIIEMAFDDFRRAVPVVLRFWGVPVE
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=185, Percent_Identity=32.972972972973, Blast_Score=85, Evalue=6e-17, Organism=Escherichia coli, GI1790849, Length=192, Percent_Identity=40.625, Blast_Score=139, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6321647, Length=187, Percent_Identity=40.6417112299465, Blast_Score=139, Evalue=3e-34, Organism=Drosophila melanogaster, GI24661601, Length=187, Percent_Identity=28.3422459893048, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 23726; Mature: 23594
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQARRLVVLDFDGTLVDGETIDLIAEAAGVDDEVEEITRRAMRGELEFGEALRERVRLL CCCCCEEEEEECCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH AGTPASVLDEVVTELRLNPGVREFVAAVRSVGAAVAVISGGFTEVVSHFCRELGLDAYVA CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH NELEVRNGFLTGRVYGPVMSSSAKGRVLMELCRRFGTRPEDTVAVGDGANDASMLKRVGL HHHHHHCCEEECEEHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCC PLGFRPKKPLYEIIEMAFDDFRRAVPVVLRFWGVPVE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AQARRLVVLDFDGTLVDGETIDLIAEAAGVDDEVEEITRRAMRGELEFGEALRERVRLL CCCCEEEEEECCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH AGTPASVLDEVVTELRLNPGVREFVAAVRSVGAAVAVISGGFTEVVSHFCRELGLDAYVA CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH NELEVRNGFLTGRVYGPVMSSSAKGRVLMELCRRFGTRPEDTVAVGDGANDASMLKRVGL HHHHHHCCEEECEEHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCC PLGFRPKKPLYEIIEMAFDDFRRAVPVVLRFWGVPVE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]