| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20093544
Identifier: 20093544
GI number: 20093544
Start: 95989
End: 98838
Strand: Direct
Name: 20093544
Synonym: MK0104
Alternate gene names: NA
Gene position: 95989-98838 (Clockwise)
Preceding gene: 20093542
Following gene: 20093549
Centisome position: 5.66
GC content: 52.49
Gene sequence:
>2850_bases ATGGTGGTCTTAGCGTTCGTTTTGATCCTCCTCGCCCTAACTCCACTCCAGCCTGTTCAAGGCCAAGAGGTCGGGACGCT AGCGGAACACCTCAGGAAGGCGTATGGAGAGGACTGGCCCCACTACGCCCCCTGGGTGCACTCGGAGATTAAAGTAGCAG ATGACGTCAAAGCGTACAACCTCCGCGCGGTGGACCTGGGGTACGATCTAGTTCCTGGAGTACCTGCCCATGGCGTCCTC GTGGCGTACGCTTCCTCGAGCAAGGTAGGGCTAGCGTTCGTCAACAGGACCGGAGAGTTCTTCAAACTCTGTGAAGTACC CCTCGAAGCCCCTCCCAAGTACCGTGAAGGATTGGATCTCGACTACATGGAGGCGGAGGGAGACAGCACCAAAAAGACCG TGCTGATAGCCTGGGGGGCTGACAACAGACTGTACGCGCTGAGGGTGAAACTTGGGGTCTACCGACCGCACGAGAACGCG AACTTCCCGGCGGTTGCCGAAGTATCGAACCCTATCGAGATCGATTTGCCGCCGGGCTATACGGACGTCAAGCGGGTGAG AGTGCTCGCGCTGGGTGATAAGTTCGTCGTGTTCTTCACCGCTCGACGAGAGGATAAGCCCACTGAGGAGTACGGTTACG ACTTGTTCTACGCACTGATAGACCCCGACGGAACCGTAAAGTTGGGTCCGAAGGACTTTGGATTCCAAGATATAATGGTC TTCCAGGTCAAACCCCTGAACGGGCCCTCTCTGATAGGGCTCGCCTTTATGGGACGATGGCGCCAATACATTGCCGGAGT ATGGTGGGTTACAATGCGACTAGAAGGTAACTCGATAAAAGTTATTCAAACGACCCTGATCAGCGATTCAGATTTTGAGA TTCCCTGTGTAGAACGCGCATTACTCGACTTCAGTTTTTACCCAATAAACAGTGACGAATACTCCGTACTGGTAGTGTGG AACGATTGTAGGTGCCCAAAAGTACTTTTTGAACGAATCGCACAGCTTGTACCTGGAGCCGAATTTAGATACAGAAAAGA TAAAACATGGGTCGTCTATGGGCAGCGACTTAAGGTCGACAAAAATGGTTATACGAGTAAGTTAGGGAAGAATTTTCCTG TCATGTATTTAATGACAGTAACACAGACCACAACACAGACCATTTCAGGAGGAGCCGTCGAGAGTTGGGACATCACGTTC GGAGAAATTGACTCTGTTACCGTATATACAACTCATGGGTCGGAGGAGAAATATTTCGTTGTCGATGCCTCAATCAAAGT CTTCGATGTTGCCATATCGAAATGGTTGAACTACGCGCGCACTGGTGAGTTCGAGGAGAAGAATACATATGGCTTCGATA TCTTATCAGTTCCACTACCGGTAAATCCAGACAGCCCGGGAATAGTAGGTACTGAGGTGGATATGGCCGACGTGGAAGTT TCCCTGACGAATTTTGGAACCTCTCAAACCAAACAGAAGTGGGTGGCCTATCCTGTATTCAATAAAGGAGGTTGCGAAAT AATACCGAAAGACCAGCCAAGTCCGGAGTGCTTCATATACTTATACGGTACAATTCAGTTCAACGAAACGCACGCTACTG AAACTCCAATAGTGGCCGCAGACCAAACTGATGTAAAAGCAAGATTACTTCCAGACGGAGTTATTATTGAAGGATTCATT GAGAACATAAATAAGAAGCCATCCCTATTCGTAATGCCAGTAGTAGCGGTTGTAGGTCCTGTAAAGGACATATATTTAGA ATACGACACACCGGATGAATTACTACACAAGTACATATATCCGCTGGATCCGTTCACCGTACTGAAGTTCCGGCCAATCC GTACCGAAGATCATCCCGGCGCTCAAGTTGGACCTGTAACGTATGATCTAAGATCGCAACAGCCCGCCCTGCCGACCGTG TACCTGGAGGTATCGTACACCACGGATTTCAGTGATCGGGTGCCTGCCGGACCTGCGCTAGTCGAAATACTCGGACCGGC ACCGCCGGAAGAACCGACCCCAGGTACCCCACTATCGGGCTACGCGATCATAGGTGACCCAGAGGTCATGAGATCCGAAA ACGTCGAGATAGAGAGAATCGTGAACGAGGAGTTGGCAGAAACCCAAGTACACGTGAAGTTCTTACCCCCGGCCGTCGAG ACACTCGAACGCATAGCACAGGTAGTAGCGTCGGGAACCATCGATAGGGAAGCGGTACGAGAGGCCGCGAGTGACGCCCT GGACGAGCTAAGTAAGTACCTGAAACAGTACAACCTGCTACAATCCCCGAGCGGTATCCCCGCCGAAGTGGACAGCGCCC TACAAACGTTGGGAGAACTCCGTGATCGTGCTCAAGACATGAAGGACGAGGAACTAGTCATGAAACTAAACACCGTCATA AACAACCTTAAGCGACTCGTGGAGGGTACGTACCACGTCTTCGTTCTCTACCACCCAGTGGGCTCGGTTCAGGAGTACCC GAAATCCATCGAAAACCGTGAAGACCTGAAGCGTCTCGTCAACGAGCTCGCTTACACCGGGGTGACCTCGTGGATCCCCA TCGACGTGGACTGTGAGGTCCCGAACGTCGTGCCTCCGGAGACACGCACGGAAACGAGCGGTACCGCCCTAATCACGGAA GTACCGGTAGTGCTTCCGCCCACGGAGTCCCATTCATCCGCACCGAAAGCCGGAAGCCAGGGGCAAAGAGGGACGGAACC CGTCAAGCCACGGGGGTCGGCCGGAGGTACCTCCTCGAACCCTACTCCGTTACTGCCGATAGTCCCCTACAGGCGTGGAC TGTCCAGACCCAGACTCAGGAGACGATCCTGCACCCGCAGGGCTCGCTGA
Upstream 100 bases:
>100_bases CACCGACCGCACACGCGATACCGCACACGTTATCACCCCGTAACCCTTATTCCACGTAAATCCACGGTGGTAGTTCGGCG GGGGGTGGACTTTGGCTCCT
Downstream 100 bases:
>100_bases GTGCGTTCGGAGAGTTTCCTCCACTTCTTGTCCAACACGCCCCGCTTACCCTCCAATTCCCTCAGGTTCTTGTGCAGCAC TTTTGTCTGGAGCAGCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 949; Mature: 949
Protein sequence:
>949_residues MVVLAFVLILLALTPLQPVQGQEVGTLAEHLRKAYGEDWPHYAPWVHSEIKVADDVKAYNLRAVDLGYDLVPGVPAHGVL VAYASSSKVGLAFVNRTGEFFKLCEVPLEAPPKYREGLDLDYMEAEGDSTKKTVLIAWGADNRLYALRVKLGVYRPHENA NFPAVAEVSNPIEIDLPPGYTDVKRVRVLALGDKFVVFFTARREDKPTEEYGYDLFYALIDPDGTVKLGPKDFGFQDIMV FQVKPLNGPSLIGLAFMGRWRQYIAGVWWVTMRLEGNSIKVIQTTLISDSDFEIPCVERALLDFSFYPINSDEYSVLVVW NDCRCPKVLFERIAQLVPGAEFRYRKDKTWVVYGQRLKVDKNGYTSKLGKNFPVMYLMTVTQTTTQTISGGAVESWDITF GEIDSVTVYTTHGSEEKYFVVDASIKVFDVAISKWLNYARTGEFEEKNTYGFDILSVPLPVNPDSPGIVGTEVDMADVEV SLTNFGTSQTKQKWVAYPVFNKGGCEIIPKDQPSPECFIYLYGTIQFNETHATETPIVAADQTDVKARLLPDGVIIEGFI ENINKKPSLFVMPVVAVVGPVKDIYLEYDTPDELLHKYIYPLDPFTVLKFRPIRTEDHPGAQVGPVTYDLRSQQPALPTV YLEVSYTTDFSDRVPAGPALVEILGPAPPEEPTPGTPLSGYAIIGDPEVMRSENVEIERIVNEELAETQVHVKFLPPAVE TLERIAQVVASGTIDREAVREAASDALDELSKYLKQYNLLQSPSGIPAEVDSALQTLGELRDRAQDMKDEELVMKLNTVI NNLKRLVEGTYHVFVLYHPVGSVQEYPKSIENREDLKRLVNELAYTGVTSWIPIDVDCEVPNVVPPETRTETSGTALITE VPVVLPPTESHSSAPKAGSQGQRGTEPVKPRGSAGGTSSNPTPLLPIVPYRRGLSRPRLRRRSCTRRAR
Sequences:
>Translated_949_residues MVVLAFVLILLALTPLQPVQGQEVGTLAEHLRKAYGEDWPHYAPWVHSEIKVADDVKAYNLRAVDLGYDLVPGVPAHGVL VAYASSSKVGLAFVNRTGEFFKLCEVPLEAPPKYREGLDLDYMEAEGDSTKKTVLIAWGADNRLYALRVKLGVYRPHENA NFPAVAEVSNPIEIDLPPGYTDVKRVRVLALGDKFVVFFTARREDKPTEEYGYDLFYALIDPDGTVKLGPKDFGFQDIMV FQVKPLNGPSLIGLAFMGRWRQYIAGVWWVTMRLEGNSIKVIQTTLISDSDFEIPCVERALLDFSFYPINSDEYSVLVVW NDCRCPKVLFERIAQLVPGAEFRYRKDKTWVVYGQRLKVDKNGYTSKLGKNFPVMYLMTVTQTTTQTISGGAVESWDITF GEIDSVTVYTTHGSEEKYFVVDASIKVFDVAISKWLNYARTGEFEEKNTYGFDILSVPLPVNPDSPGIVGTEVDMADVEV SLTNFGTSQTKQKWVAYPVFNKGGCEIIPKDQPSPECFIYLYGTIQFNETHATETPIVAADQTDVKARLLPDGVIIEGFI ENINKKPSLFVMPVVAVVGPVKDIYLEYDTPDELLHKYIYPLDPFTVLKFRPIRTEDHPGAQVGPVTYDLRSQQPALPTV YLEVSYTTDFSDRVPAGPALVEILGPAPPEEPTPGTPLSGYAIIGDPEVMRSENVEIERIVNEELAETQVHVKFLPPAVE TLERIAQVVASGTIDREAVREAASDALDELSKYLKQYNLLQSPSGIPAEVDSALQTLGELRDRAQDMKDEELVMKLNTVI NNLKRLVEGTYHVFVLYHPVGSVQEYPKSIENREDLKRLVNELAYTGVTSWIPIDVDCEVPNVVPPETRTETSGTALITE VPVVLPPTESHSSAPKAGSQGQRGTEPVKPRGSAGGTSSNPTPLLPIVPYRRGLSRPRLRRRSCTRRAR >Mature_949_residues MVVLAFVLILLALTPLQPVQGQEVGTLAEHLRKAYGEDWPHYAPWVHSEIKVADDVKAYNLRAVDLGYDLVPGVPAHGVL VAYASSSKVGLAFVNRTGEFFKLCEVPLEAPPKYREGLDLDYMEAEGDSTKKTVLIAWGADNRLYALRVKLGVYRPHENA NFPAVAEVSNPIEIDLPPGYTDVKRVRVLALGDKFVVFFTARREDKPTEEYGYDLFYALIDPDGTVKLGPKDFGFQDIMV FQVKPLNGPSLIGLAFMGRWRQYIAGVWWVTMRLEGNSIKVIQTTLISDSDFEIPCVERALLDFSFYPINSDEYSVLVVW NDCRCPKVLFERIAQLVPGAEFRYRKDKTWVVYGQRLKVDKNGYTSKLGKNFPVMYLMTVTQTTTQTISGGAVESWDITF GEIDSVTVYTTHGSEEKYFVVDASIKVFDVAISKWLNYARTGEFEEKNTYGFDILSVPLPVNPDSPGIVGTEVDMADVEV SLTNFGTSQTKQKWVAYPVFNKGGCEIIPKDQPSPECFIYLYGTIQFNETHATETPIVAADQTDVKARLLPDGVIIEGFI ENINKKPSLFVMPVVAVVGPVKDIYLEYDTPDELLHKYIYPLDPFTVLKFRPIRTEDHPGAQVGPVTYDLRSQQPALPTV YLEVSYTTDFSDRVPAGPALVEILGPAPPEEPTPGTPLSGYAIIGDPEVMRSENVEIERIVNEELAETQVHVKFLPPAVE TLERIAQVVASGTIDREAVREAASDALDELSKYLKQYNLLQSPSGIPAEVDSALQTLGELRDRAQDMKDEELVMKLNTVI NNLKRLVEGTYHVFVLYHPVGSVQEYPKSIENREDLKRLVNELAYTGVTSWIPIDVDCEVPNVVPPETRTETSGTALITE VPVVLPPTESHSSAPKAGSQGQRGTEPVKPRGSAGGTSSNPTPLLPIVPYRRGLSRPRLRRRSCTRRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105697; Mature: 105697
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVLAFVLILLALTPLQPVQGQEVGTLAEHLRKAYGEDWPHYAPWVHSEIKVADDVKAYN CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEE LRAVDLGYDLVPGVPAHGVLVAYASSSKVGLAFVNRTGEFFKLCEVPLEAPPKYREGLDL EEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHCCCCCCCCCHHCCCCC DYMEAEGDSTKKTVLIAWGADNRLYALRVKLGVYRPHENANFPAVAEVSNPIEIDLPPGY EEEECCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCEEEECCCCEEEECCCCC TDVKRVRVLALGDKFVVFFTARREDKPTEEYGYDLFYALIDPDGTVKLGPKDFGFQDIMV CCHHEEEEEEECCEEEEEEEECCCCCCCHHCCCEEEEEEECCCCCEEECCCCCCCCEEEE FQVKPLNGPSLIGLAFMGRWRQYIAGVWWVTMRLEGNSIKVIQTTLISDSDFEIPCVERA EEEECCCCCCCHHHHHHHHHHHHHCEEEEEEEEEECCEEEEEEEEEECCCCCCCHHHHHH LLDFSFYPINSDEYSVLVVWNDCRCPKVLFERIAQLVPGAEFRYRKDKTWVVYGQRLKVD HHCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCEEEEEEEEEEEC KNGYTSKLGKNFPVMYLMTVTQTTTQTISGGAVESWDITFGEIDSVTVYTTHGSEEKYFV CCCCHHHHCCCCCEEEEEEEECHHHHHCCCCCEEEECCEECCCCEEEEEEECCCCCEEEE VDASIKVFDVAISKWLNYARTGEFEEKNTYGFDILSVPLPVNPDSPGIVGTEVDMADVEV EECCEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCEECCEEEE SLTNFGTSQTKQKWVAYPVFNKGGCEIIPKDQPSPECFIYLYGTIQFNETHATETPIVAA EEECCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEC DQTDVKARLLPDGVIIEGFIENINKKPSLFVMPVVAVVGPVKDIYLEYDTPDELLHKYIY CCCCCEEEECCCCEEEHHHHHCCCCCCCEEEEEHHHHHCCCEEEEEEECCHHHHHHHHCC PLDPFTVLKFRPIRTEDHPGAQVGPVTYDLRSQQPALPTVYLEVSYTTDFSDRVPAGPAL CCCCEEEEEEEECCCCCCCCCEECCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCHHH VEILGPAPPEEPTPGTPLSGYAIIGDPEVMRSENVEIERIVNEELAETQVHVKFLPPAVE HEEECCCCCCCCCCCCCCCCEEEECCHHHHHCCCCHHHHHHHHHHHCCEEEEEECCHHHH TLERIAQVVASGTIDREAVREAASDALDELSKYLKQYNLLQSPSGIPAEVDSALQTLGEL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RDRAQDMKDEELVMKLNTVINNLKRLVEGTYHVFVLYHPVGSVQEYPKSIENREDLKRLV HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHH NELAYTGVTSWIPIDVDCEVPNVVPPETRTETSGTALITEVPVVLPPTESHSSAPKAGSQ HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCC GQRGTEPVKPRGSAGGTSSNPTPLLPIVPYRRGLSRPRLRRRSCTRRAR CCCCCCCCCCCCCCCCCCCCCCCEEEECHHHCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MVVLAFVLILLALTPLQPVQGQEVGTLAEHLRKAYGEDWPHYAPWVHSEIKVADDVKAYN CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEE LRAVDLGYDLVPGVPAHGVLVAYASSSKVGLAFVNRTGEFFKLCEVPLEAPPKYREGLDL EEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHCCCCCCCCCHHCCCCC DYMEAEGDSTKKTVLIAWGADNRLYALRVKLGVYRPHENANFPAVAEVSNPIEIDLPPGY EEEECCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCCEEEECCCCEEEECCCCC TDVKRVRVLALGDKFVVFFTARREDKPTEEYGYDLFYALIDPDGTVKLGPKDFGFQDIMV CCHHEEEEEEECCEEEEEEEECCCCCCCHHCCCEEEEEEECCCCCEEECCCCCCCCEEEE FQVKPLNGPSLIGLAFMGRWRQYIAGVWWVTMRLEGNSIKVIQTTLISDSDFEIPCVERA EEEECCCCCCCHHHHHHHHHHHHHCEEEEEEEEEECCEEEEEEEEEECCCCCCCHHHHHH LLDFSFYPINSDEYSVLVVWNDCRCPKVLFERIAQLVPGAEFRYRKDKTWVVYGQRLKVD HHCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCEEEEEEEEEEEC KNGYTSKLGKNFPVMYLMTVTQTTTQTISGGAVESWDITFGEIDSVTVYTTHGSEEKYFV CCCCHHHHCCCCCEEEEEEEECHHHHHCCCCCEEEECCEECCCCEEEEEEECCCCCEEEE VDASIKVFDVAISKWLNYARTGEFEEKNTYGFDILSVPLPVNPDSPGIVGTEVDMADVEV EECCEEEHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCEECCEEEE SLTNFGTSQTKQKWVAYPVFNKGGCEIIPKDQPSPECFIYLYGTIQFNETHATETPIVAA EEECCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEC DQTDVKARLLPDGVIIEGFIENINKKPSLFVMPVVAVVGPVKDIYLEYDTPDELLHKYIY CCCCCEEEECCCCEEEHHHHHCCCCCCCEEEEEHHHHHCCCEEEEEEECCHHHHHHHHCC PLDPFTVLKFRPIRTEDHPGAQVGPVTYDLRSQQPALPTVYLEVSYTTDFSDRVPAGPAL CCCCEEEEEEEECCCCCCCCCEECCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCHHH VEILGPAPPEEPTPGTPLSGYAIIGDPEVMRSENVEIERIVNEELAETQVHVKFLPPAVE HEEECCCCCCCCCCCCCCCCEEEECCHHHHHCCCCHHHHHHHHHHHCCEEEEEECCHHHH TLERIAQVVASGTIDREAVREAASDALDELSKYLKQYNLLQSPSGIPAEVDSALQTLGEL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH RDRAQDMKDEELVMKLNTVINNLKRLVEGTYHVFVLYHPVGSVQEYPKSIENREDLKRLV HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCHHHHHHHH NELAYTGVTSWIPIDVDCEVPNVVPPETRTETSGTALITEVPVVLPPTESHSSAPKAGSQ HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCC GQRGTEPVKPRGSAGGTSSNPTPLLPIVPYRRGLSRPRLRRRSCTRRAR CCCCCCCCCCCCCCCCCCCCCCCEEEECHHHCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA