Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is yheS [C]

Identifier: 20093531

GI number: 20093531

Start: 83902

End: 85701

Strand: Direct

Name: yheS [C]

Synonym: MK0091

Alternate gene names: 20093531

Gene position: 83902-85701 (Clockwise)

Preceding gene: 20093530

Following gene: 20093537

Centisome position: 4.95

GC content: 60.72

Gene sequence:

>1800_bases
GTGGTATCGATCGGCAGGAGGGTAGCAGTCGTGGACAGGGAGCGGTGCAAAGGAGGATCCAAATGCGACTACGTCTGCCA
ACGTTTCTGCCCTGGGGTCAGGACAGGGCGTGAGACCATCACGATCGACGAGGACACCAACAAGCCCGTGATCTCCGAGG
AACTGTGCTCCGGCTGCGGTATCTGCGCCCAGAAGTGTCCCTTCGATGCGATCAAAGTTGTACGCCTCCCCGAGGAGCTA
GAGGAAGAATGCGTACACAAGTACGAGGAGGGAGGGTTCCGACTCTACAGGCTCCCCGTTCCCAAACCCGGGAAGGTCAC
CGGCGTGATCGGACGCAACGCGATCGGTAAGACCACCGCCGCTAAGATACTCACAGGAGAGCTCAAACCCAACCTAGGGG
ATCCTGAAGCGGACCCCGACTGGGACGAGGTGATCCGAGCATTTTCGGGCACGGAGCTCCAGGAACACTTCCGACGTATC
GCGGACGGTGATCTCCGACCCGTCATGAAGCCGCAGTACGTCGAGGCCCTGCCCAAGGTCGTTAAGGGCCGGGTGAAGGA
CGTCCTCGAGGACGTAGACGAGCTCGGGGTTGTCGACGAGCTCATCGAGCGCCTCGGACTGACCGAGGTGACCGACCGAC
GGATCTCCGACCTCAGCGGTGGAGAGCTGCAGCGTGTCGCTATCGCCGCGGCACTCTCTCGAGACGCGGACTTCCTGGTT
TTCGACGAACCGTGTAGCTACCTCGACGTCGAACAACGACTCTCGCTGGCCCGGTCACTCCGTGAGATCGTCGAGGATCG
AGGTATTCCGATGCTCGTCATCGAGCACGACTTAGCCACACTGGACTACGTCGCCGACGTGGTGCACGTCCTCTATGGAA
AGCGTGGTGCGTACGGTGTGGTGTCCAAGCCGATGGGTGTAGGCAAGGGGATCAACGCGTACCTGAAGGGTTACTTGGAG
GCCGAGAACGTCCGCTTCCGGGACGAGGAAGTGGTGCTCCCGGAGAAACCGGCGGAGGCCGAGGCGGGTGAGCGAGACAC
CCTCGTGGAGTACGGCGAGCTCGTCAAGGAATACGACGGCGACTTCAGGCTCGAAGTGGAGCCGGGCGAAATTCGTGTCG
GGGAGATCATCGGAGCCCTCGGGCCTAACGCCATCGGTAAGACGACCTTCGTTAAGCTCCTGGCCGGAGTACTCGAGCCT
ACCGGAGGAGGAGTCGATGTCGACGTTAAGGTCTCGTACAAGCCGCAGTACCTGGAGGTGGATTCGGATGAACCCGTCGA
GCAAGTGCTACGAAGGACCGCCGGTTCGGAGTGGGGATCGAGCTGGTACCGGAGCAACATCGTGGAGCCACTGGACTTAG
AGTACCTGTTCGATAGACCCTTGTGTGAGCTGAGCGGCGGTGAGCTGCAGCGCGTAGCCGTGGCGGCCGCCCTATCCCGG
GAAGCCGATCTGTACCTTCTAGACGAGCCTAGCGCGTATTTGGACGTTGAAGAGAGGATCAACACCGCCCGCGTCATCAG
ACGGGTGATCGAAGCACGGGATGCTGCCGCCATCGTAGTCGACCACGACTTACTCCTGCTAGACTACATCAGTGACAGGA
TGATGGTGTTCGAAGGCGAGCCAGGAAAGCACGGACGTGCGAATCCGCCGGAGAGTAAACGGGAAGCCATGAACAGGTTT
CTGTCGAACTTAGGCGTGACGTTCAGGCGGGACCCGGAGACACGGAGGCCGAGAGCCAACAAGCCCGGCAGTCACCGTGA
CCGTGAACAGAAGCGTCGTGGTGAGTACTTCTACGCGTAG

Upstream 100 bases:

>100_bases
GCGTATCGGCGGCGCCAAGGGCTGGTTAGCGTACGGTCTAGGGGCGTACCTCTCGGCGTGGATACTAGTTTGGACGTACT
TCATTAACCGGTAATCGGGG

Downstream 100 bases:

>100_bases
GGGACCTCCCACGGCACTAGCCGACGAAAACGCGTCGGTCTCGAGCTCCACCGATTCTCGGACAGCAACATACCCCGACA
ACGTCCCGGAGGCCCTTTAT

Product: putative ATPase RIL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MVSIGRRVAVVDRERCKGGSKCDYVCQRFCPGVRTGRETITIDEDTNKPVISEELCSGCGICAQKCPFDAIKVVRLPEEL
EEECVHKYEEGGFRLYRLPVPKPGKVTGVIGRNAIGKTTAAKILTGELKPNLGDPEADPDWDEVIRAFSGTELQEHFRRI
ADGDLRPVMKPQYVEALPKVVKGRVKDVLEDVDELGVVDELIERLGLTEVTDRRISDLSGGELQRVAIAAALSRDADFLV
FDEPCSYLDVEQRLSLARSLREIVEDRGIPMLVIEHDLATLDYVADVVHVLYGKRGAYGVVSKPMGVGKGINAYLKGYLE
AENVRFRDEEVVLPEKPAEAEAGERDTLVEYGELVKEYDGDFRLEVEPGEIRVGEIIGALGPNAIGKTTFVKLLAGVLEP
TGGGVDVDVKVSYKPQYLEVDSDEPVEQVLRRTAGSEWGSSWYRSNIVEPLDLEYLFDRPLCELSGGELQRVAVAAALSR
EADLYLLDEPSAYLDVEERINTARVIRRVIEARDAAAIVVDHDLLLLDYISDRMMVFEGEPGKHGRANPPESKREAMNRF
LSNLGVTFRRDPETRRPRANKPGSHRDREQKRRGEYFYA

Sequences:

>Translated_599_residues
MVSIGRRVAVVDRERCKGGSKCDYVCQRFCPGVRTGRETITIDEDTNKPVISEELCSGCGICAQKCPFDAIKVVRLPEEL
EEECVHKYEEGGFRLYRLPVPKPGKVTGVIGRNAIGKTTAAKILTGELKPNLGDPEADPDWDEVIRAFSGTELQEHFRRI
ADGDLRPVMKPQYVEALPKVVKGRVKDVLEDVDELGVVDELIERLGLTEVTDRRISDLSGGELQRVAIAAALSRDADFLV
FDEPCSYLDVEQRLSLARSLREIVEDRGIPMLVIEHDLATLDYVADVVHVLYGKRGAYGVVSKPMGVGKGINAYLKGYLE
AENVRFRDEEVVLPEKPAEAEAGERDTLVEYGELVKEYDGDFRLEVEPGEIRVGEIIGALGPNAIGKTTFVKLLAGVLEP
TGGGVDVDVKVSYKPQYLEVDSDEPVEQVLRRTAGSEWGSSWYRSNIVEPLDLEYLFDRPLCELSGGELQRVAVAAALSR
EADLYLLDEPSAYLDVEERINTARVIRRVIEARDAAAIVVDHDLLLLDYISDRMMVFEGEPGKHGRANPPESKREAMNRF
LSNLGVTFRRDPETRRPRANKPGSHRDREQKRRGEYFYA
>Mature_599_residues
MVSIGRRVAVVDRERCKGGSKCDYVCQRFCPGVRTGRETITIDEDTNKPVISEELCSGCGICAQKCPFDAIKVVRLPEEL
EEECVHKYEEGGFRLYRLPVPKPGKVTGVIGRNAIGKTTAAKILTGELKPNLGDPEADPDWDEVIRAFSGTELQEHFRRI
ADGDLRPVMKPQYVEALPKVVKGRVKDVLEDVDELGVVDELIERLGLTEVTDRRISDLSGGELQRVAIAAALSRDADFLV
FDEPCSYLDVEQRLSLARSLREIVEDRGIPMLVIEHDLATLDYVADVVHVLYGKRGAYGVVSKPMGVGKGINAYLKGYLE
AENVRFRDEEVVLPEKPAEAEAGERDTLVEYGELVKEYDGDFRLEVEPGEIRVGEIIGALGPNAIGKTTFVKLLAGVLEP
TGGGVDVDVKVSYKPQYLEVDSDEPVEQVLRRTAGSEWGSSWYRSNIVEPLDLEYLFDRPLCELSGGELQRVAVAAALSR
EADLYLLDEPSAYLDVEERINTARVIRRVIEARDAAAIVVDHDLLLLDYISDRMMVFEGEPGKHGRANPPESKREAMNRF
LSNLGVTFRRDPETRRPRANKPGSHRDREQKRRGEYFYA

Specific function: Unknown

COG id: COG1245

COG function: function code R; Predicted ATPase, RNase L inhibitor (RLI) homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI108773784, Length=594, Percent_Identity=44.9494949494949, Blast_Score=534, Evalue=1e-152,
Organism=Homo sapiens, GI108773782, Length=594, Percent_Identity=44.9494949494949, Blast_Score=534, Evalue=1e-152,
Organism=Escherichia coli, GI1789751, Length=556, Percent_Identity=24.1007194244604, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI2367384, Length=519, Percent_Identity=26.2042389210019, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1788165, Length=197, Percent_Identity=29.9492385786802, Blast_Score=83, Evalue=7e-17,
Organism=Escherichia coli, GI1787758, Length=190, Percent_Identity=28.9473684210526, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1788761, Length=237, Percent_Identity=29.535864978903, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI1789962, Length=198, Percent_Identity=28.7878787878788, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1787182, Length=503, Percent_Identity=24.4532803180915, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081791, Length=196, Percent_Identity=29.0816326530612, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1789891, Length=193, Percent_Identity=26.4248704663212, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1786803, Length=205, Percent_Identity=25.8536585365854, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI87081782, Length=231, Percent_Identity=29.004329004329, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI145693107, Length=216, Percent_Identity=29.1666666666667, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1787029, Length=193, Percent_Identity=31.6062176165803, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1787500, Length=214, Percent_Identity=26.1682242990654, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1790739, Length=207, Percent_Identity=25.6038647342995, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI87081709, Length=202, Percent_Identity=30.1980198019802, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1786398, Length=200, Percent_Identity=32, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1787712, Length=201, Percent_Identity=26.3681592039801, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17555800, Length=593, Percent_Identity=44.3507588532884, Blast_Score=525, Evalue=1e-149,
Organism=Saccharomyces cerevisiae, GI6320296, Length=607, Percent_Identity=43.163097199341, Blast_Score=506, Evalue=1e-144,
Organism=Saccharomyces cerevisiae, GI6324314, Length=327, Percent_Identity=26.2996941896024, Blast_Score=68, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6323278, Length=234, Percent_Identity=28.6324786324786, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24661270, Length=593, Percent_Identity=43.5075885328836, Blast_Score=523, Evalue=1e-148,
Organism=Drosophila melanogaster, GI21355589, Length=593, Percent_Identity=43.5075885328836, Blast_Score=523, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013283
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR007209 [H]

Pfam domain/function: PF00005 ABC_tran; PF04068 RLI [H]

EC number: NA

Molecular weight: Translated: 66849; Mature: 66849

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSIGRRVAVVDRERCKGGSKCDYVCQRFCPGVRTGRETITIDEDTNKPVISEELCSGCG
CCCCCCEEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHCCCC
ICAQKCPFDAIKVVRLPEELEEECVHKYEEGGFRLYRLPVPKPGKVTGVIGRNAIGKTTA
CHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCCHHH
AKILTGELKPNLGDPEADPDWDEVIRAFSGTELQEHFRRIADGDLRPVMKPQYVEALPKV
HHHEECCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
VKGRVKDVLEDVDELGVVDELIERLGLTEVTDRRISDLSGGELQRVAIAAALSRDADFLV
HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEE
FDEPCSYLDVEQRLSLARSLREIVEDRGIPMLVIEHDLATLDYVADVVHVLYGKRGAYGV
ECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCC
VSKPMGVGKGINAYLKGYLEAENVRFRDEEVVLPEKPAEAEAGERDTLVEYGELVKEYDG
CCCCCCCCCCHHHHHHHHHHHCCCEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCC
DFRLEVEPGEIRVGEIIGALGPNAIGKTTFVKLLAGVLEPTGGGVDVDVKVSYKPQYLEV
CEEEEECCCCEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEC
DSDEPVEQVLRRTAGSEWGSSWYRSNIVEPLDLEYLFDRPLCELSGGELQRVAVAAALSR
CCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCHHCCCCHHHHHHHHHHHCC
EADLYLLDEPSAYLDVEERINTARVIRRVIEARDAAAIVVDHDLLLLDYISDRMMVFEGE
CCCEEEEECCCHHEEHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCEEEEECC
PGKHGRANPPESKREAMNRFLSNLGVTFRRDPETRRPRANKPGSHRDREQKRRGEYFYA
CCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MVSIGRRVAVVDRERCKGGSKCDYVCQRFCPGVRTGRETITIDEDTNKPVISEELCSGCG
CCCCCCEEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHCCCC
ICAQKCPFDAIKVVRLPEELEEECVHKYEEGGFRLYRLPVPKPGKVTGVIGRNAIGKTTA
CHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCCHHH
AKILTGELKPNLGDPEADPDWDEVIRAFSGTELQEHFRRIADGDLRPVMKPQYVEALPKV
HHHEECCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
VKGRVKDVLEDVDELGVVDELIERLGLTEVTDRRISDLSGGELQRVAIAAALSRDADFLV
HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEE
FDEPCSYLDVEQRLSLARSLREIVEDRGIPMLVIEHDLATLDYVADVVHVLYGKRGAYGV
ECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCC
VSKPMGVGKGINAYLKGYLEAENVRFRDEEVVLPEKPAEAEAGERDTLVEYGELVKEYDG
CCCCCCCCCCHHHHHHHHHHHCCCEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCC
DFRLEVEPGEIRVGEIIGALGPNAIGKTTFVKLLAGVLEPTGGGVDVDVKVSYKPQYLEV
CEEEEECCCCEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEC
DSDEPVEQVLRRTAGSEWGSSWYRSNIVEPLDLEYLFDRPLCELSGGELQRVAVAAALSR
CCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCHHCCCCHHHHHHHHHHHCC
EADLYLLDEPSAYLDVEERINTARVIRRVIEARDAAAIVVDHDLLLLDYISDRMMVFEGE
CCCEEEEECCCHHEEHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCEEEEECC
PGKHGRANPPESKREAMNRFLSNLGVTFRRDPETRRPRANKPGSHRDREQKRRGEYFYA
CCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]