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The map label for this gene is ygfT [C]

Identifier: 20093524

GI number: 20093524

Start: 77794

End: 78321

Strand: Direct

Name: ygfT [C]

Synonym: MK0084

Alternate gene names: 20093524

Gene position: 77794-78321 (Clockwise)

Preceding gene: 20093523

Following gene: 20093525

Centisome position: 4.59

GC content: 62.31

Gene sequence:

>528_bases
GTGGAAGGAGCTCGAAGGGAAGGAGTAAAGGCTTGGGTCGGTCTACCCGGCTGTATAGGTTGCGTTCTGTGCGCGGAGGC
GTGTCCGATCGGCGCCATAGAGATCGTCGACGGCCGGCCGCAGAAGTGTATACACTGTGACCCGGAGCGGGCGATGTGCG
CGCGGGCTTGCCCCCATCACGCGATCGTTCAGGTGTGCGAAACGCTCGTGGTGGACCGAGACCGATGTAATGGGTGCGGA
AAGTGTGCCGAGGCCTGCCCAGTAGGCGGGATATTCATCCGCGAGGACGTCGCCGTGAAGTGTGACAACTGCTTGGACCG
AGACTACCCCGCGTGTGTGGAAGTATGTCCAGTGGCCGGCGCGGACGTGGCTCCCGTGAACGAGCGAGTTTTATGGAGAC
GATCCCGAGCTGCCCGCACACTCCGAAACTTGCCGGGGAGTGGGGGTCATGCCCGACGACTCGGATCGAGAGCTGCTCGA
AAGCATAGCCGAAGCCACAGTCGAAGCGTTGCGCGTGGCCGAAACTAA

Upstream 100 bases:

>100_bases
AGGAGCGCAAGCCGGTGAAGGAGTACCTCAAGCGTCAGAAGCGGTTCCAACACCTGAGCGAGGACGACATAGAGAAGATC
CAAAGGATGGTGGACGAGCA

Downstream 100 bases:

>100_bases
GCTTCCGGATGACGTGCTGGAGAGGGTCGAACGGGCCCTGGAGGAGGAAGAAGACGACCATGCCCGGATGATGCTGGAGG
CGATCCTTGAGAACGTCCGC

Product: Fe-S-cluster-containing hydrogenase component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MEGARREGVKAWVGLPGCIGCVLCAEACPIGAIEIVDGRPQKCIHCDPERAMCARACPHHAIVQVCETLVVDRDRCNGCG
KCAEACPVGGIFIREDVAVKCDNCLDRDYPACVEVCPVAGADVAPVNERVLWRRSRAARTLRNLPGSGGHARRLGSRAAR
KHSRSHSRSVARGRN

Sequences:

>Translated_175_residues
MEGARREGVKAWVGLPGCIGCVLCAEACPIGAIEIVDGRPQKCIHCDPERAMCARACPHHAIVQVCETLVVDRDRCNGCG
KCAEACPVGGIFIREDVAVKCDNCLDRDYPACVEVCPVAGADVAPVNERVLWRRSRAARTLRNLPGSGGHARRLGSRAAR
KHSRSHSRSVARGRN
>Mature_175_residues
MEGARREGVKAWVGLPGCIGCVLCAEACPIGAIEIVDGRPQKCIHCDPERAMCARACPHHAIVQVCETLVVDRDRCNGCG
KCAEACPVGGIFIREDVAVKCDNCLDRDYPACVEVCPVAGADVAPVNERVLWRRSRAARTLRNLPGSGGHARRLGSRAAR
KHSRSHSRSVARGRN

Specific function: Unknown

COG id: COG1142

COG function: function code C; Fe-S-cluster-containing hydrogenase components 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 18838; Mature: 18838

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
10.9 %Cys+Met (Translated Protein)
9.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
10.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGARREGVKAWVGLPGCIGCVLCAEACPIGAIEIVDGRPQKCIHCDPERAMCARACPHH
CCCCHHCCCHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCHHHHHHHHHCCHH
AIVQVCETLVVDRDRCNGCGKCAEACPVGGIFIREDVAVKCDNCLDRDYPACVEVCPVAG
HHHHHHHHHHHCCHHCCCHHHHHHHCCCCCEEECCCCHHHCHHHCCCCCHHHHHHCCCCC
ADVAPVNERVLWRRSRAARTLRNLPGSGGHARRLGSRAARKHSRSHSRSVARGRN
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEGARREGVKAWVGLPGCIGCVLCAEACPIGAIEIVDGRPQKCIHCDPERAMCARACPHH
CCCCHHCCCHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEECCHHHHHHHHHCCHH
AIVQVCETLVVDRDRCNGCGKCAEACPVGGIFIREDVAVKCDNCLDRDYPACVEVCPVAG
HHHHHHHHHHHCCHHCCCHHHHHHHCCCCCEEECCCCHHHCHHHCCCCCHHHHHHCCCCC
ADVAPVNERVLWRRSRAARTLRNLPGSGGHARRLGSRAARKHSRSHSRSVARGRN
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]