| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093516
Identifier: 20093516
GI number: 20093516
Start: 70930
End: 71757
Strand: Direct
Name: 20093516
Synonym: MK0076
Alternate gene names: NA
Gene position: 70930-71757 (Clockwise)
Preceding gene: 20093515
Following gene: 20093517
Centisome position: 4.18
GC content: 60.39
Gene sequence:
>828_bases TTGATCGACATTTCGTCCCTGTCATGGGCCGTAGCGCTCGGAGTAGTTCGAGGTCTCTACGTGTTCGCGGGATCGTTCAT CGCGGCGGCCGTCTACCGGTACGTGGCGGAGGAGAGGATCCGAATGACGACCTCCGCCTTCATGGGTCTTTTAACCGCCG GGTTCGCGGCCGGCCCCAAAGAACTCACGGCACTCACGTACCAAAATCCGAACGTGGAGATGATCGCGTGGGCTATCGCC ACCTTGTTCGCGATACCCGCCAGGACCTACGGGGACGCTATCGGTGAGAGGATTCTCCGGGCGAGGATACGAGCATCGAT GAACCCCAGAACTAAGGTTTACAGGCTCCCCGAGAACCCCAACGAGATCAAGGATATCCCCGGAGAACCACCCGCGCCCA TGGAGGTCAAAGAACGGATCGCGGGACGCGAGTACGAGTTCCCTCGAGGCACTCCTAAGGAGGAAGTTGAGCGAGTGATC AAGCGAGATTTGGAGAGCGAGACCGGGATAGGTCGCGCCGTAGTCCGCGTGCGAAACGGCGACGTCGAGGTACTCGTAGC GGGTGCGAAGCCCCCGGTCTCGCACACGCTCCCTCCGGACAAGGTCGCCGTTTCCGTGGAACCACTAGGCGGCGCCATCC ACATCGGAGAGGGAGATCGTGTACGTGTGTTCGTGGACGGTCGCGAGCTGGGTGAAGCGGAGGTATGGCGGCGGGTAGAT GATCGGGTAGTATTGGTGATGGAAGAACGCACTGCCGAAGAGCTGCTGAAGGAGATCACTCAAGGCAAGCAGGTGTCCCT TATGGCGGTGAGAGGGGAGGGAAGTTGA
Upstream 100 bases:
>100_bases AGATCAAGATAGGTGACGTAACGCTGGTCCGCGAGGGAGGTAAGTTCCGGGTCGTAGAGCCTGGAACGGTTCGGCTCGGA GATGAGGTGGTGGAAGTAGG
Downstream 100 bases:
>100_bases AGCGTGAGCGCGTTCGGATCGAGGGAGGCTCGATCAGGGTAGACGGACCGTCCCGGGCGCGAGTAATTCGAGGTGAAGCG ACCACGAACAAAGGTACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MIDISSLSWAVALGVVRGLYVFAGSFIAAAVYRYVAEERIRMTTSAFMGLLTAGFAAGPKELTALTYQNPNVEMIAWAIA TLFAIPARTYGDAIGERILRARIRASMNPRTKVYRLPENPNEIKDIPGEPPAPMEVKERIAGREYEFPRGTPKEEVERVI KRDLESETGIGRAVVRVRNGDVEVLVAGAKPPVSHTLPPDKVAVSVEPLGGAIHIGEGDRVRVFVDGRELGEAEVWRRVD DRVVLVMEERTAEELLKEITQGKQVSLMAVRGEGS
Sequences:
>Translated_275_residues MIDISSLSWAVALGVVRGLYVFAGSFIAAAVYRYVAEERIRMTTSAFMGLLTAGFAAGPKELTALTYQNPNVEMIAWAIA TLFAIPARTYGDAIGERILRARIRASMNPRTKVYRLPENPNEIKDIPGEPPAPMEVKERIAGREYEFPRGTPKEEVERVI KRDLESETGIGRAVVRVRNGDVEVLVAGAKPPVSHTLPPDKVAVSVEPLGGAIHIGEGDRVRVFVDGRELGEAEVWRRVD DRVVLVMEERTAEELLKEITQGKQVSLMAVRGEGS >Mature_275_residues MIDISSLSWAVALGVVRGLYVFAGSFIAAAVYRYVAEERIRMTTSAFMGLLTAGFAAGPKELTALTYQNPNVEMIAWAIA TLFAIPARTYGDAIGERILRARIRASMNPRTKVYRLPENPNEIKDIPGEPPAPMEVKERIAGREYEFPRGTPKEEVERVI KRDLESETGIGRAVVRVRNGDVEVLVAGAKPPVSHTLPPDKVAVSVEPLGGAIHIGEGDRVRVFVDGRELGEAEVWRRVD DRVVLVMEERTAEELLKEITQGKQVSLMAVRGEGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30221; Mature: 30221
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDISSLSWAVALGVVRGLYVFAGSFIAAAVYRYVAEERIRMTTSAFMGLLTAGFAAGPK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ELTALTYQNPNVEMIAWAIATLFAIPARTYGDAIGERILRARIRASMNPRTKVYRLPENP HHEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC NEIKDIPGEPPAPMEVKERIAGREYEFPRGTPKEEVERVIKRDLESETGIGRAVVRVRNG CHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECC DVEVLVAGAKPPVSHTLPPDKVAVSVEPLGGAIHIGEGDRVRVFVDGRELGEAEVWRRVD CEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEEECCCCCCHHHHHHHCC DRVVLVMEERTAEELLKEITQGKQVSLMAVRGEGS CEEEEEECHHHHHHHHHHHHCCCEEEEEEEECCCC >Mature Secondary Structure MIDISSLSWAVALGVVRGLYVFAGSFIAAAVYRYVAEERIRMTTSAFMGLLTAGFAAGPK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ELTALTYQNPNVEMIAWAIATLFAIPARTYGDAIGERILRARIRASMNPRTKVYRLPENP HHEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC NEIKDIPGEPPAPMEVKERIAGREYEFPRGTPKEEVERVIKRDLESETGIGRAVVRVRNG CHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECC DVEVLVAGAKPPVSHTLPPDKVAVSVEPLGGAIHIGEGDRVRVFVDGRELGEAEVWRRVD CEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEEECCCCCCHHHHHHHCC DRVVLVMEERTAEELLKEITQGKQVSLMAVRGEGS CEEEEEECHHHHHHHHHHHHCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA