Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093475

Identifier: 20093475

GI number: 20093475

Start: 29245

End: 30336

Strand: Reverse

Name: 20093475

Synonym: MK0035

Alternate gene names: NA

Gene position: 30336-29245 (Counterclockwise)

Preceding gene: 20093476

Following gene: 20093474

Centisome position: 1.79

GC content: 61.36

Gene sequence:

>1092_bases
TTGACGGTGCTACGTTCGATCGATGAGCTTGCCGAGCTCAACCCGTTCGCCGTGGTAGGTGCCGGGGGCGGCGGGGAAAA
GTTCGCGACACTTCCCACGGTCGAAGTCGTTGGGATTATGGACGACGACCCGAGTAAGGTGGGAATGGAGATCGCCGGAG
TGAAAGTTACGAACGACTTCGATGAGGCCGTCGAAGGGGCGTCCTCCGTGGCGATTATGCTTCCGAAGGGTGCGGAACAC
AGAGCCCTGGAGCTGGCCGTGGAATCCATCCGCCGCGGCCTCAATGTAGTTACGTCCTTCAGGTCACTTCCGCTCGAAGA
CTATCCTGCGCTAGTGAAGCTGGCCGAGTCGAAAGGCGTCAAGATCCTCGAACTGAGCCCCAGGCTGGACGTCGTTCGTG
AGGTAGCCGGGGACGCCCCAGAACGCTGCACTGAGGTGGTACCCAAGAAGGACAGGCCTGAGACGGAAATACCGCGCGTG
TTCGTGGGTGGGACCTCTCAAGAGTGTGGTAAACGTACTACGACCCTCAAGTTAGCGGAAGGACTCGAGGCGTCAGGCTA
TACCCCCGCGACGGTGGCCACGGGAGAGTTCGCAGCGCTCGAAGCGGACGTGGGGTTCCGGGCGGGTTCTCTCTCCGTCA
TGGACGTAGCCTCCGCAGTAGCCCACGCCGTCGACTACGTCGCTGAGGAGAAAGACGCCGACGTGATCATTGTAGAGGGA
CAGTCTTCACTCACCGAGCGTCGTAACCCGCATCCACGGCCCCTCTACTTAGGGATATTACTCGGGTGTGCTCCGGATGC
GGTGGTGGTATGTCACCGTCCGAACCACCCGTTCCGGTACCCTCGTGGGGTTTTGGCCGAAGTCAATGCCCTCCGGGTTA
TAGTCCCCGACGCGGACCTCGCGGCGGTGTGCGTGAACCCGAGAAACTTGGAGGAACCCTTCGAGACGTACGCTCGTAGA
CTCCGTGCTAAGATATGGCGGGCTACGGGAGAGCAAGTTCCAGTGAGGAACCCCGTCGAGGAATCCGAGAAGCTGGCACG
GGACGTGCTCCGCACTATCGAGGGGGCCGGTCGGGGCGGGGCACGATGTTAG

Upstream 100 bases:

>100_bases
TTCGTGAGAAGCGACGAACGCTACGGGCCGCTCCGGGGTACCGGTAATACTATCAGCACTGGCCGGCGCGGATCGCGGTG
AAGCCGGGGGGCGGCTACAG

Downstream 100 bases:

>100_bases
GGTTCTTGAAAAAGATCTTTGGCGAGGGGGAGAACTCGAAAGGCCCCATGCTTGAGGACTTCCTGGAGGAGGAAGAGGAA
GAGAGAACTCAGCACCCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MTVLRSIDELAELNPFAVVGAGGGGEKFATLPTVEVVGIMDDDPSKVGMEIAGVKVTNDFDEAVEGASSVAIMLPKGAEH
RALELAVESIRRGLNVVTSFRSLPLEDYPALVKLAESKGVKILELSPRLDVVREVAGDAPERCTEVVPKKDRPETEIPRV
FVGGTSQECGKRTTTLKLAEGLEASGYTPATVATGEFAALEADVGFRAGSLSVMDVASAVAHAVDYVAEEKDADVIIVEG
QSSLTERRNPHPRPLYLGILLGCAPDAVVVCHRPNHPFRYPRGVLAEVNALRVIVPDADLAAVCVNPRNLEEPFETYARR
LRAKIWRATGEQVPVRNPVEESEKLARDVLRTIEGAGRGGARC

Sequences:

>Translated_363_residues
MTVLRSIDELAELNPFAVVGAGGGGEKFATLPTVEVVGIMDDDPSKVGMEIAGVKVTNDFDEAVEGASSVAIMLPKGAEH
RALELAVESIRRGLNVVTSFRSLPLEDYPALVKLAESKGVKILELSPRLDVVREVAGDAPERCTEVVPKKDRPETEIPRV
FVGGTSQECGKRTTTLKLAEGLEASGYTPATVATGEFAALEADVGFRAGSLSVMDVASAVAHAVDYVAEEKDADVIIVEG
QSSLTERRNPHPRPLYLGILLGCAPDAVVVCHRPNHPFRYPRGVLAEVNALRVIVPDADLAAVCVNPRNLEEPFETYARR
LRAKIWRATGEQVPVRNPVEESEKLARDVLRTIEGAGRGGARC
>Mature_362_residues
TVLRSIDELAELNPFAVVGAGGGGEKFATLPTVEVVGIMDDDPSKVGMEIAGVKVTNDFDEAVEGASSVAIMLPKGAEHR
ALELAVESIRRGLNVVTSFRSLPLEDYPALVKLAESKGVKILELSPRLDVVREVAGDAPERCTEVVPKKDRPETEIPRVF
VGGTSQECGKRTTTLKLAEGLEASGYTPATVATGEFAALEADVGFRAGSLSVMDVASAVAHAVDYVAEEKDADVIIVEGQ
SSLTERRNPHPRPLYLGILLGCAPDAVVVCHRPNHPFRYPRGVLAEVNALRVIVPDADLAAVCVNPRNLEEPFETYARRL
RAKIWRATGEQVPVRNPVEESEKLARDVLRTIEGAGRGGARC

Specific function: Unknown

COG id: COG3367

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38920; Mature: 38789

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLRSIDELAELNPFAVVGAGGGGEKFATLPTVEVVGIMDDDPSKVGMEIAGVKVTNDF
CCHHHHHHHHHCCCCEEEEECCCCCCCEEECCCEEEEEEECCCCHHCCEEEEEEEEECCH
DEAVEGASSVAIMLPKGAEHRALELAVESIRRGLNVVTSFRSLPLEDYPALVKLAESKGV
HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
KILELSPRLDVVREVAGDAPERCTEVVPKKDRPETEIPRVFVGGTSQECGKRTTTLKLAE
EEEEECCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEECCCCHHHCCCCCEEEHHC
GLEASGYTPATVATGEFAALEADVGFRAGSLSVMDVASAVAHAVDYVAEEKDADVIIVEG
CCCCCCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECC
QSSLTERRNPHPRPLYLGILLGCAPDAVVVCHRPNHPFRYPRGVLAEVNALRVIVPDADL
CHHHHHCCCCCCCCEEEEEHHCCCCCEEEEEECCCCCCCCCCHHHHCCCEEEEEECCCCE
AAVCVNPRNLEEPFETYARRLRAKIWRATGEQVPVRNPVEESEKLARDVLRTIEGAGRGG
EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
ARC
CCC
>Mature Secondary Structure 
TVLRSIDELAELNPFAVVGAGGGGEKFATLPTVEVVGIMDDDPSKVGMEIAGVKVTNDF
CHHHHHHHHHCCCCEEEEECCCCCCCEEECCCEEEEEEECCCCHHCCEEEEEEEEECCH
DEAVEGASSVAIMLPKGAEHRALELAVESIRRGLNVVTSFRSLPLEDYPALVKLAESKGV
HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
KILELSPRLDVVREVAGDAPERCTEVVPKKDRPETEIPRVFVGGTSQECGKRTTTLKLAE
EEEEECCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEECCCCHHHCCCCCEEEHHC
GLEASGYTPATVATGEFAALEADVGFRAGSLSVMDVASAVAHAVDYVAEEKDADVIIVEG
CCCCCCCCCCEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECC
QSSLTERRNPHPRPLYLGILLGCAPDAVVVCHRPNHPFRYPRGVLAEVNALRVIVPDADL
CHHHHHCCCCCCCCEEEEEHHCCCCCEEEEEECCCCCCCCCCHHHHCCCEEEEEECCCCE
AAVCVNPRNLEEPFETYARRLRAKIWRATGEQVPVRNPVEESEKLARDVLRTIEGAGRGG
EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
ARC
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA