| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093464
Identifier: 20093464
GI number: 20093464
Start: 21809
End: 22345
Strand: Reverse
Name: 20093464
Synonym: MK0024
Alternate gene names: NA
Gene position: 22345-21809 (Counterclockwise)
Preceding gene: 20093465
Following gene: 20093463
Centisome position: 1.32
GC content: 56.05
Gene sequence:
>537_bases GTGCACGGACTCACTGAAGGCCTTGCGCGGCACTTTTACCCACTCGTCGACCCGTTTATCCACTACTTCGGTCCCGCCCT TGGGATGCTGGTGGCTGCGGCTCTTGTGACGCTCTTCATCGACATCGTTTACGAACTCGTGATCGGGAGGGAAGAGCTGG AGCGAGTCCGGAAAATGGCTGACGAGACCAAGAAGTACCAAGAAGAGCTCCAGAGGGCTAAGGTGTTAGGTGATGTCAAG AGGATGAAGGAGATAGAGGAGAAGATGCGAGACCACTCCCGAGAGTTCCTAAAGGTTCAGTCCCAGCTGATGAGTAAGCA GATCAAGGCCATGATCATCACGTTCCCGCCTATAATCATTATTATATACACCCTCGAGTACCGGCTGGCCCACTGGACGG TGAAGTTACCCTTCTACGTGCCGGGTGTGGGGGATACCTTGGGCCCCGTGGGCTGGTACATCCTCTGCGCCGTCACGGTG TCGTTCGTGCTCAAGCCCTTGGCGGAAACGGCGGTAAAACGCTTCGGAGGTGGGTGA
Upstream 100 bases:
>100_bases GGGGCTACCGTGAAAATCATCGAGAACCACGACGACCGCCTCGAAGAGGCCGTACGTGAGTTCGTCGAGACGGTCCGATC CCTCTGACGGGGAGGGAGAC
Downstream 100 bases:
>100_bases GACGACGATGCCAGCCCCGAGGTACCGGTCCAGGTCCTGTCGACGGGTGTACAAGCGCACCCCTGGAGGTAGGACCGTCA TTCACTTCGAGAAGAAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MHGLTEGLARHFYPLVDPFIHYFGPALGMLVAAALVTLFIDIVYELVIGREELERVRKMADETKKYQEELQRAKVLGDVK RMKEIEEKMRDHSREFLKVQSQLMSKQIKAMIITFPPIIIIIYTLEYRLAHWTVKLPFYVPGVGDTLGPVGWYILCAVTV SFVLKPLAETAVKRFGGG
Sequences:
>Translated_178_residues MHGLTEGLARHFYPLVDPFIHYFGPALGMLVAAALVTLFIDIVYELVIGREELERVRKMADETKKYQEELQRAKVLGDVK RMKEIEEKMRDHSREFLKVQSQLMSKQIKAMIITFPPIIIIIYTLEYRLAHWTVKLPFYVPGVGDTLGPVGWYILCAVTV SFVLKPLAETAVKRFGGG >Mature_178_residues MHGLTEGLARHFYPLVDPFIHYFGPALGMLVAAALVTLFIDIVYELVIGREELERVRKMADETKKYQEELQRAKVLGDVK RMKEIEEKMRDHSREFLKVQSQLMSKQIKAMIITFPPIIIIIYTLEYRLAHWTVKLPFYVPGVGDTLGPVGWYILCAVTV SFVLKPLAETAVKRFGGG
Specific function: Unknown
COG id: COG1422
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20355; Mature: 20355
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGLTEGLARHFYPLVDPFIHYFGPALGMLVAAALVTLFIDIVYELVIGREELERVRKMA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH DETKKYQEELQRAKVLGDVKRMKEIEEKMRDHSREFLKVQSQLMSKQIKAMIITFPPIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIYTLEYRLAHWTVKLPFYVPGVGDTLGPVGWYILCAVTVSFVLKPLAETAVKRFGGG HHHHHHHHHHHHEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHGLTEGLARHFYPLVDPFIHYFGPALGMLVAAALVTLFIDIVYELVIGREELERVRKMA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH DETKKYQEELQRAKVLGDVKRMKEIEEKMRDHSREFLKVQSQLMSKQIKAMIITFPPIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIYTLEYRLAHWTVKLPFYVPGVGDTLGPVGWYILCAVTVSFVLKPLAETAVKRFGGG HHHHHHHHHHHHEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA