| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is DsrE [C]
Identifier: 20093448
GI number: 20093448
Start: 8796
End: 9161
Strand: Direct
Name: DsrE [C]
Synonym: MK0008
Alternate gene names: 20093448
Gene position: 8796-9161 (Clockwise)
Preceding gene: 20093444
Following gene: 20093449
Centisome position: 0.52
GC content: 55.19
Gene sequence:
>366_bases ATGGGGACACCCGAGGGGATAGACGTGATTACAGTGGTAATCTCCGAGGCTCCATACGGTCAAGAACGTGCATACACTGC GCTGAGATTCGCTCTCACTGCCCTTGTCGAGGGGGAAGAAGTCAAGATATTCCTAATCGAAGACGGGGTGTTCTTAGGGA AGAAAGGCCAAAATCCTGACGAGGTTCCCAACTACTTGGAGCTCCTGGAACAGTGCATCGAGCAGGGCGCTGAAGTGAAG GCCTGCGGACCCTGCTCCAAAGCCCGCGGGCTGAGCGAGGAAGACTTCATCGAGGGCGTCGAGCTGGCCACCATGCACGA CTTGGTGAATTGGGTGAAGGAGTCCGATAACGTCATCTTCTTCTGA
Upstream 100 bases:
>100_bases CGCCGATCAACATGCACTTATATTTATTATTTTTGGGTAGCTATTGAAGTTCGTAATCGTCATTCGAATGGTTTCAAGCA ACATTTATCCACGGGATCTC
Downstream 100 bases:
>100_bases CGGGACCACCTTTCGGACGTCAACGGTATGCGAAAAAGGGATATCAGCCCCTCGGACCGGTACGGGCAGGGATCCCCGTG TTACGGTGGTCGTCGGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MGTPEGIDVITVVISEAPYGQERAYTALRFALTALVEGEEVKIFLIEDGVFLGKKGQNPDEVPNYLELLEQCIEQGAEVK ACGPCSKARGLSEEDFIEGVELATMHDLVNWVKESDNVIFF
Sequences:
>Translated_121_residues MGTPEGIDVITVVISEAPYGQERAYTALRFALTALVEGEEVKIFLIEDGVFLGKKGQNPDEVPNYLELLEQCIEQGAEVK ACGPCSKARGLSEEDFIEGVELATMHDLVNWVKESDNVIFF >Mature_120_residues GTPEGIDVITVVISEAPYGQERAYTALRFALTALVEGEEVKIFLIEDGVFLGKKGQNPDEVPNYLELLEQCIEQGAEVKA CGPCSKARGLSEEDFIEGVELATMHDLVNWVKESDNVIFF
Specific function: Unknown
COG id: COG1553
COG function: function code P; Uncharacterized conserved protein involved in intracellular sulfur reduction
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0989
Homologues:
Organism=Escherichia coli, GI1787471, Length=115, Percent_Identity=38.2608695652174, Blast_Score=82, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y008_METKA (P94948)
Other databases:
- EMBL: Y10251 - EMBL: AE009439 - RefSeq: NP_613295.1 - ProteinModelPortal: P94948 - SMR: P94948 - GeneID: 1477310 - GenomeReviews: AE009439_GR - KEGG: mka:MK0008 - NMPDR: fig|190192.1.peg.8 - HOGENOM: HBG538485 - OMA: NDAPYGS - ProtClustDB: CLSK876414 - BioCyc: MKAN190192:MK0008-MONOMER - InterPro: IPR003787
Pfam domain/function: PF02635 DrsE
EC number: NA
Molecular weight: Translated: 13324; Mature: 13193
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTPEGIDVITVVISEAPYGQERAYTALRFALTALVEGEEVKIFLIEDGVFLGKKGQNPD CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEECCCCCCCC EVPNYLELLEQCIEQGAEVKACGPCSKARGLSEEDFIEGVELATMHDLVNWVKESDNVIF HHHHHHHHHHHHHHCCCCEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE F C >Mature Secondary Structure GTPEGIDVITVVISEAPYGQERAYTALRFALTALVEGEEVKIFLIEDGVFLGKKGQNPD CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEECCCCCCCC EVPNYLELLEQCIEQGAEVKACGPCSKARGLSEEDFIEGVELATMHDLVNWVKESDNVIF HHHHHHHHHHHHHHCCCCEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9151968; 11930014