| Definition | Streptococcus pyogenes MGAS8232, complete genome. |
|---|---|
| Accession | NC_003485 |
| Length | 1,895,017 |
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The map label for this gene is nrdD [H]
Identifier: 19746977
GI number: 19746977
Start: 1816783
End: 1818981
Strand: Reverse
Name: nrdD [H]
Synonym: spyM18_2168
Alternate gene names: 19746977
Gene position: 1818981-1816783 (Counterclockwise)
Preceding gene: 19746978
Following gene: 19746976
Centisome position: 95.99
GC content: 37.97
Gene sequence:
>2199_bases ATGGTAAGTTTAGAAGAAGACAAGGTGACTGTTCAACCTGATATTAAAGTGATTAAACGAGATGGTCGCCTTGTTAATTT TGATAGTACAAAAATCTATAGTGCTTTATTAAAAGCAAGCATGAAAGTAACTCGGATGTCGCCACTTGTTGAGGCTAAAT TAGAGGCTATTTCTGATCGCATTATAGCAGAAATTATTGAGCGTTTTCCAACTAATATCAAAATTTATGAAATCCAAAAT ATTGTAGAGCATAAGCTTCTTGCAGCTAATGAATATGCTATTGCAAAAGAATACATTAATTATCGTACTCAGCGTGACTT TGCACGTTCACAAGCAACAGATATCAATTTTTCTATTGATAAATTAATTAATAAAGATCAAACAGTTGTTAATGAAAATG CTAACAAAGATAGCGATGTTTTTAATACTCAACGAGATTTAACTGCTGGAATCGTAGGGAAATCAATTGGTTTAAAAATG TTACCTTCGCATGTTGCTAATGCTCATCAAAAAGGAGATATCCATTACCATGATTTGGATTACAGTCCTTATACACCGAT GACGAACTGCTGTTTAATTGACTTTAAGGGCATGTTAGCCAATGGCTTTAAAATTGGTAATGCTGAAGTGGAAAGTCCCA AGTCTATTCAAACTGCAACAGCTCAGATCTCACAGATTATTGCGAATGTAGCATCAAGTCAGTACGGCGGATGCACAGCT GATCGCATTGACGAGTTTTTAGCCCCATATGCGGAGCTTAACTTTAAAAAACATATGGCTGATGCTAAGAAATGGATCGT TGAGACTAAGAGAGAAAGCTATGCTTTTGAAAAGACTCAAAAAGATATTTATGATGCGATGCAGTCTTTGGAGTATGAAA TTAATACGCTCTTTACGTCTAATGGTCAAACACCATTTACTTCTTTAGGATTTGGTTTGGGGACGTCTTGGTTTGAACGT GAGATTCAAAAAGCTATTTTGACCATTCGGATTAATGGTCTTGGCAGTGAACATCGCACGGCTATTTTCCCTAAATTAAT TTTCACGGTTAAACGTGGCTTGAATTTAGAACCAGATTCACCAAACTATGATATTAAGACTTTGGCTTTAGAATGTGCGA CTAAGCGGATGTACCCGGATATGTTATCTTATGATAAAATTATTGATTTGACAGGATCTTTCAAATCTCCAATGGGATGC CGCTCTTTCCTTCAAGGCTGGAAAGATGAAAATGGGCAAGATGTGACCTCAGGCCGTATGAATCTTGGGGTTGTCACCCT CAATTTACCTCGCATTGCCATGGAATCAAATGGCGATATGGATAAGTTTTGGGAGCTGTTTAATGAGAGGATGCTAATTA GTAAGGATGCTTTAATTTATCGTGTCGAACGTGTCACAGAAGCAAAACCAGCAAATGCCCCTATTCTTTATCAATATGGT GCTTTTGGAAAGCGTTTGGAGAAGACAGGGAATGTAAATGATCTCTTTAAGAATCGTCGTGCAACAGTCTCTCTTGGCTA TATTGGTCTTTATGAAGTGGCATCTGTTTTTTATGGTGGTCAATGGGAAGGTAATCCAGATGCTAAAGCTTTTACCTTGT CAATTGTCAAGGCAATGAAACAGGCCTGTGAGGATTGGTCAGATGAATATGGTTATCATTTCTCTGTTTATTCGACTCCA TCAGAAAGTTTGACAGATCGCTTTTGTCGTTTAGATACGGAAAAATTTGGCATTGTGACAGATATTACGGATAAAGAATA CTATACAAATTCTTTTCACTATGATGTGCGTAAGAGTCCGACACCTTTTGAAAAATTAGATTTTGAAAAAGATTATCCAG AAGCAGGTGCTTCAGGTGGTTTTATCCACTACTGTGAGTATCCTGTTTTGCAACAAAATCCAAAGGCCTTGGAAGCGGTT TGGGACTATGCTTATGATCGTGTGGGGTATTTGGGAACCAATACGCCTATTGATAAATGCTATAATTGCCAATTTGAAGG CGATTTTACCCCAACAGAACGTGGTTTTACTTGCCCAAACTGTGGCAATAATGACCCTAAAACAGTTGATGTGGTCAAAC GTACATGTGGTTACTTGGGGAATCCTCAGGCCCGCCCAATGGTTAACGGTCGCCATAAGGAAATCTCTGCGCGTGTAAAA CATATGAATGGTTCTACTATAAAATACCCAGGCCTGTAA
Upstream 100 bases:
>100_bases GTAATTTAATATCAATATATTGTGTTCGAGCAAAAAACTTGACACAATATATTGATTTTTTTAGTTGTCGTGATATAATA GTTCCGTAAGGAGATTTGAT
Downstream 100 bases:
>100_bases ACTCAAGCTGGGGGAGAGCCCTTTTGATGGAAATATGATATGCTTAAAAGGTTGCTTCATGCAAGCAATCTTTTATTGTT TAATGGTTTCTTAGCAATTG
Product: anaerobic ribonucleoside triphosphate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 732; Mature: 732
Protein sequence:
>732_residues MVSLEEDKVTVQPDIKVIKRDGRLVNFDSTKIYSALLKASMKVTRMSPLVEAKLEAISDRIIAEIIERFPTNIKIYEIQN IVEHKLLAANEYAIAKEYINYRTQRDFARSQATDINFSIDKLINKDQTVVNENANKDSDVFNTQRDLTAGIVGKSIGLKM LPSHVANAHQKGDIHYHDLDYSPYTPMTNCCLIDFKGMLANGFKIGNAEVESPKSIQTATAQISQIIANVASSQYGGCTA DRIDEFLAPYAELNFKKHMADAKKWIVETKRESYAFEKTQKDIYDAMQSLEYEINTLFTSNGQTPFTSLGFGLGTSWFER EIQKAILTIRINGLGSEHRTAIFPKLIFTVKRGLNLEPDSPNYDIKTLALECATKRMYPDMLSYDKIIDLTGSFKSPMGC RSFLQGWKDENGQDVTSGRMNLGVVTLNLPRIAMESNGDMDKFWELFNERMLISKDALIYRVERVTEAKPANAPILYQYG AFGKRLEKTGNVNDLFKNRRATVSLGYIGLYEVASVFYGGQWEGNPDAKAFTLSIVKAMKQACEDWSDEYGYHFSVYSTP SESLTDRFCRLDTEKFGIVTDITDKEYYTNSFHYDVRKSPTPFEKLDFEKDYPEAGASGGFIHYCEYPVLQQNPKALEAV WDYAYDRVGYLGTNTPIDKCYNCQFEGDFTPTERGFTCPNCGNNDPKTVDVVKRTCGYLGNPQARPMVNGRHKEISARVK HMNGSTIKYPGL
Sequences:
>Translated_732_residues MVSLEEDKVTVQPDIKVIKRDGRLVNFDSTKIYSALLKASMKVTRMSPLVEAKLEAISDRIIAEIIERFPTNIKIYEIQN IVEHKLLAANEYAIAKEYINYRTQRDFARSQATDINFSIDKLINKDQTVVNENANKDSDVFNTQRDLTAGIVGKSIGLKM LPSHVANAHQKGDIHYHDLDYSPYTPMTNCCLIDFKGMLANGFKIGNAEVESPKSIQTATAQISQIIANVASSQYGGCTA DRIDEFLAPYAELNFKKHMADAKKWIVETKRESYAFEKTQKDIYDAMQSLEYEINTLFTSNGQTPFTSLGFGLGTSWFER EIQKAILTIRINGLGSEHRTAIFPKLIFTVKRGLNLEPDSPNYDIKTLALECATKRMYPDMLSYDKIIDLTGSFKSPMGC RSFLQGWKDENGQDVTSGRMNLGVVTLNLPRIAMESNGDMDKFWELFNERMLISKDALIYRVERVTEAKPANAPILYQYG AFGKRLEKTGNVNDLFKNRRATVSLGYIGLYEVASVFYGGQWEGNPDAKAFTLSIVKAMKQACEDWSDEYGYHFSVYSTP SESLTDRFCRLDTEKFGIVTDITDKEYYTNSFHYDVRKSPTPFEKLDFEKDYPEAGASGGFIHYCEYPVLQQNPKALEAV WDYAYDRVGYLGTNTPIDKCYNCQFEGDFTPTERGFTCPNCGNNDPKTVDVVKRTCGYLGNPQARPMVNGRHKEISARVK HMNGSTIKYPGL >Mature_732_residues MVSLEEDKVTVQPDIKVIKRDGRLVNFDSTKIYSALLKASMKVTRMSPLVEAKLEAISDRIIAEIIERFPTNIKIYEIQN IVEHKLLAANEYAIAKEYINYRTQRDFARSQATDINFSIDKLINKDQTVVNENANKDSDVFNTQRDLTAGIVGKSIGLKM LPSHVANAHQKGDIHYHDLDYSPYTPMTNCCLIDFKGMLANGFKIGNAEVESPKSIQTATAQISQIIANVASSQYGGCTA DRIDEFLAPYAELNFKKHMADAKKWIVETKRESYAFEKTQKDIYDAMQSLEYEINTLFTSNGQTPFTSLGFGLGTSWFER EIQKAILTIRINGLGSEHRTAIFPKLIFTVKRGLNLEPDSPNYDIKTLALECATKRMYPDMLSYDKIIDLTGSFKSPMGC RSFLQGWKDENGQDVTSGRMNLGVVTLNLPRIAMESNGDMDKFWELFNERMLISKDALIYRVERVTEAKPANAPILYQYG AFGKRLEKTGNVNDLFKNRRATVSLGYIGLYEVASVFYGGQWEGNPDAKAFTLSIVKAMKQACEDWSDEYGYHFSVYSTP SESLTDRFCRLDTEKFGIVTDITDKEYYTNSFHYDVRKSPTPFEKLDFEKDYPEAGASGGFIHYCEYPVLQQNPKALEAV WDYAYDRVGYLGTNTPIDKCYNCQFEGDFTPTERGFTCPNCGNNDPKTVDVVKRTCGYLGNPQARPMVNGRHKEISARVK HMNGSTIKYPGL
Specific function: Unknown
COG id: COG1328
COG function: function code F; Oxygen-sensitive ribonucleoside-triphosphate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glycine radical domain [H]
Homologues:
Organism=Escherichia coli, GI1790686, Length=714, Percent_Identity=52.2408963585434, Blast_Score=763, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005144 - InterPro: IPR001150 - InterPro: IPR019777 - InterPro: IPR012833 [H]
Pfam domain/function: PF03477 ATP-cone; PF01228 Gly_radical [H]
EC number: =1.17.4.2 [H]
Molecular weight: Translated: 82843; Mature: 82843
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS51161 ATP_CONE ; PS00850 GLY_RADICAL_1 ; PS51149 GLY_RADICAL_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSLEEDKVTVQPDIKVIKRDGRLVNFDSTKIYSALLKASMKVTRMSPLVEAKLEAISDR CCCCCCCCEEECCCHHEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIAEIIERFPTNIKIYEIQNIVEHKLLAANEYAIAKEYINYRTQRDFARSQATDINFSID HHHHHHHHCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHH KLINKDQTVVNENANKDSDVFNTQRDLTAGIVGKSIGLKMLPSHVANAHQKGDIHYHDLD HHCCCCCHHHCCCCCCCCHHHHCHHHHHHHHHHHHCCHHHHHHHHHCCHHCCCEEEEECC YSPYTPMTNCCLIDFKGMLANGFKIGNAEVESPKSIQTATAQISQIIANVASSQYGGCTA CCCCCCCCCEEEEEEHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCH DRIDEFLAPYAELNFKKHMADAKKWIVETKRESYAFEKTQKDIYDAMQSLEYEINTLFTS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEC NGQTPFTSLGFGLGTSWFEREIQKAILTIRINGLGSEHRTAIFPKLIFTVKRGLNLEPDS CCCCCHHHHCCCCCHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCC PNYDIKTLALECATKRMYPDMLSYDKIIDLTGSFKSPMGCRSFLQGWKDENGQDVTSGRM CCCCHHHHHHHHHHHHHCHHHHCHHHHEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCE NLGVVTLNLPRIAMESNGDMDKFWELFNERMLISKDALIYRVERVTEAKPANAPILYQYG EEEEEEEECCEEEECCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCEEEECC AFGKRLEKTGNVNDLFKNRRATVSLGYIGLYEVASVFYGGQWEGNPDAKAFTLSIVKAMK CHHHHHHHCCCHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH QACEDWSDEYGYHFSVYSTPSESLTDRFCRLDTEKFGIVTDITDKEYYTNSFHYDVRKSP HHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCHHCCEEEECCCCCCCCCCEEEECCCCC TPFEKLDFEKDYPEAGASGGFIHYCEYPVLQQNPKALEAVWDYAYDRVGYLGTNTPIDKC CCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH YNCQFEGDFTPTERGFTCPNCGNNDPKTVDVVKRTCGYLGNPQARPMVNGRHKEISARVK EECEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH HMNGSTIKYPGL HCCCCEEECCCC >Mature Secondary Structure MVSLEEDKVTVQPDIKVIKRDGRLVNFDSTKIYSALLKASMKVTRMSPLVEAKLEAISDR CCCCCCCCEEECCCHHEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIAEIIERFPTNIKIYEIQNIVEHKLLAANEYAIAKEYINYRTQRDFARSQATDINFSID HHHHHHHHCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHH KLINKDQTVVNENANKDSDVFNTQRDLTAGIVGKSIGLKMLPSHVANAHQKGDIHYHDLD HHCCCCCHHHCCCCCCCCHHHHCHHHHHHHHHHHHCCHHHHHHHHHCCHHCCCEEEEECC YSPYTPMTNCCLIDFKGMLANGFKIGNAEVESPKSIQTATAQISQIIANVASSQYGGCTA CCCCCCCCCEEEEEEHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCH DRIDEFLAPYAELNFKKHMADAKKWIVETKRESYAFEKTQKDIYDAMQSLEYEINTLFTS HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEC NGQTPFTSLGFGLGTSWFEREIQKAILTIRINGLGSEHRTAIFPKLIFTVKRGLNLEPDS CCCCCHHHHCCCCCHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCC PNYDIKTLALECATKRMYPDMLSYDKIIDLTGSFKSPMGCRSFLQGWKDENGQDVTSGRM CCCCHHHHHHHHHHHHHCHHHHCHHHHEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCE NLGVVTLNLPRIAMESNGDMDKFWELFNERMLISKDALIYRVERVTEAKPANAPILYQYG EEEEEEEECCEEEECCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCEEEECC AFGKRLEKTGNVNDLFKNRRATVSLGYIGLYEVASVFYGGQWEGNPDAKAFTLSIVKAMK CHHHHHHHCCCHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH QACEDWSDEYGYHFSVYSTPSESLTDRFCRLDTEKFGIVTDITDKEYYTNSFHYDVRKSP HHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCHHCCEEEECCCCCCCCCCEEEECCCCC TPFEKLDFEKDYPEAGASGGFIHYCEYPVLQQNPKALEAVWDYAYDRVGYLGTNTPIDKC CCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH YNCQFEGDFTPTERGFTCPNCGNNDPKTVDVVKRTCGYLGNPQARPMVNGRHKEISARVK EECEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH HMNGSTIKYPGL HCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8421692; 7610040; 9278503; 8083158; 7852304 [H]