Click here to switch to the map view.

The map label for this gene is yvrP [H]

Identifier: 19746919

GI number: 19746919

Start: 1749224

End: 1750492

Strand: Reverse

Name: yvrP [H]

Synonym: spyM18_2090

Alternate gene names: 19746919

Gene position: 1750492-1749224 (Counterclockwise)

Preceding gene: 19746920

Following gene: 19746918

Centisome position: 92.37

GC content: 39.72

Gene sequence:

>1269_bases
ATGTTTCAGTTAAGAAAAAAAATGACGCGCAAACAATTAGCCTTGTTGAGTGCTGGAGTGTTGACCTGTGTGGTTGGTGG
TACCTACTTGATAATGAATCATCAACAACAAGAAATTGTCTCTAGTGTCAACAAAGTAAAAGCCTTAACCATAAAAGAAG
CCATGGAACAAGGAAAAGATATCAGCTTGACCTTAGCTGGCGAAGTAACAGCTAACAACAGCAGCAAAGTCAAAATCGAC
TCAAGTAAAGGAGAAGTCAAAGATGTCTTTGTCAAAAAAGGCGATGTTGTCAAAGTAGGACAACCCTTGTTTAGCTATGA
AACGTCACAACGGTTAACGGCTCAAAGTTCAGAATTTGATGTTCAAACCAAAGCCAATCAACTCCAAGTTGCTAAAACCA
ATGCAGCATTGAAGTGGGAAACCTACAATCGCAAGGTCAATGAAATCAATACCCTAAAATCTCGCTACAACACTGCACCA
GATGAGAGCTTACTAGAGCAAATTCGCAGCGCAGAAGACAGTGTATCTCAAGCACTAAGCGATGCCAAAACAGCAGATAG
CGATGTCAAAACCGCTCAAATCGAACTCGATAAAGCTAATGCTACTGCCGCAACGGAAAAAGGTAAACTAGAGTATGACA
CCGTTAAGTCAGACACCGCAGGAACCATTGTTAGTCTAAATACTGATTTGCCAAATCAATCAAAATCCAAAAAAGAAAAT
GAAACTTTTATGGAAATTATCGACAAATCAAAAATGTTAGTCAAAGGTAACATCAGTGAATTTGACCGTGACAAGTTAAA
AATCGATCAAAAAGTCGAAGTGATTGACCGCAAAGACAACTCTAAAAAATGGACTGGAAAAGTAACCCAAGTTGGCAACC
TCAAAGCAGAGGAAAAAGGCCAAGGTCAAGGCCAAGGTGGCAATGACCAACAAGATAATCCAAACCAAGCAAAATTCCCT
TATGTTATCGAACTTGACCAATCAGACAAGCAGCCACTCATTGGTTCACACACCTATGTTAATGTGCTCAACAATGTTCC
AGAAGCTGGCAAGATCGTATTGAAAGAAACCTTTACAATGGCAGAAAATGGAAAAACCTATGTGTGGAAAGTTGATAAAA
ACAAGGTCAAAAAACAAGAAATCAAGACTAAGCCCTTCTCAAAAGGTTATGTTGAGGTGACAAGCGGCTTGACTATGCAA
GATAAGATTGCTCAGCCGCTTCCTGGCATGAAAGACGGTATGGAGGTAGGAAGTATTGTTAAACCTTAA

Upstream 100 bases:

>100_bases
ACTAGTAGGTCTTGCTAGTGACCGTTCAAAAGGGATAACGTTGGTATGGTATAACCATAAAAATCGTATAAAAAGAAAAA
ATAGCTATTGAGGAGAAAGT

Downstream 100 bases:

>100_bases
AGATATTCGAAAAAGCTATCATCTTGGGACTGAAGAATTTGCGATTTTAAAAGGAATCGATTTAGAAGTTAACGAGGGTG
ACTTTTTAGCCATCATGGGA

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MFQLRKKMTRKQLALLSAGVLTCVVGGTYLIMNHQQQEIVSSVNKVKALTIKEAMEQGKDISLTLAGEVTANNSSKVKID
SSKGEVKDVFVKKGDVVKVGQPLFSYETSQRLTAQSSEFDVQTKANQLQVAKTNAALKWETYNRKVNEINTLKSRYNTAP
DESLLEQIRSAEDSVSQALSDAKTADSDVKTAQIELDKANATAATEKGKLEYDTVKSDTAGTIVSLNTDLPNQSKSKKEN
ETFMEIIDKSKMLVKGNISEFDRDKLKIDQKVEVIDRKDNSKKWTGKVTQVGNLKAEEKGQGQGQGGNDQQDNPNQAKFP
YVIELDQSDKQPLIGSHTYVNVLNNVPEAGKIVLKETFTMAENGKTYVWKVDKNKVKKQEIKTKPFSKGYVEVTSGLTMQ
DKIAQPLPGMKDGMEVGSIVKP

Sequences:

>Translated_422_residues
MFQLRKKMTRKQLALLSAGVLTCVVGGTYLIMNHQQQEIVSSVNKVKALTIKEAMEQGKDISLTLAGEVTANNSSKVKID
SSKGEVKDVFVKKGDVVKVGQPLFSYETSQRLTAQSSEFDVQTKANQLQVAKTNAALKWETYNRKVNEINTLKSRYNTAP
DESLLEQIRSAEDSVSQALSDAKTADSDVKTAQIELDKANATAATEKGKLEYDTVKSDTAGTIVSLNTDLPNQSKSKKEN
ETFMEIIDKSKMLVKGNISEFDRDKLKIDQKVEVIDRKDNSKKWTGKVTQVGNLKAEEKGQGQGQGGNDQQDNPNQAKFP
YVIELDQSDKQPLIGSHTYVNVLNNVPEAGKIVLKETFTMAENGKTYVWKVDKNKVKKQEIKTKPFSKGYVEVTSGLTMQ
DKIAQPLPGMKDGMEVGSIVKP
>Mature_422_residues
MFQLRKKMTRKQLALLSAGVLTCVVGGTYLIMNHQQQEIVSSVNKVKALTIKEAMEQGKDISLTLAGEVTANNSSKVKID
SSKGEVKDVFVKKGDVVKVGQPLFSYETSQRLTAQSSEFDVQTKANQLQVAKTNAALKWETYNRKVNEINTLKSRYNTAP
DESLLEQIRSAEDSVSQALSDAKTADSDVKTAQIELDKANATAATEKGKLEYDTVKSDTAGTIVSLNTDLPNQSKSKKEN
ETFMEIIDKSKMLVKGNISEFDRDKLKIDQKVEVIDRKDNSKKWTGKVTQVGNLKAEEKGQGQGQGGNDQQDNPNQAKFP
YVIELDQSDKQPLIGSHTYVNVLNNVPEAGKIVLKETFTMAENGKTYVWKVDKNKVKKQEIKTKPFSKGYVEVTSGLTMQ
DKIAQPLPGMKDGMEVGSIVKP

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 46636; Mature: 46636

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQLRKKMTRKQLALLSAGVLTCVVGGTYLIMNHQQQEIVSSVNKVKALTIKEAMEQGKD
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC
ISLTLAGEVTANNSSKVKIDSSKGEVKDVFVKKGDVVKVGQPLFSYETSQRLTAQSSEFD
EEEEEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEECCCHHHCCCHHHHHCCCCCCE
VQTKANQLQVAKTNAALKWETYNRKVNEINTLKSRYNTAPDESLLEQIRSAEDSVSQALS
EEECCCEEEEEECCCEEEEEHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DAKTADSDVKTAQIELDKANATAATEKGKLEYDTVKSDTAGTIVSLNTDLPNQSKSKKEN
HHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCHHH
ETFMEIIDKSKMLVKGNISEFDRDKLKIDQKVEVIDRKDNSKKWTGKVTQVGNLKAEEKG
HHHHHHHHCCCEEEECCCCHHCHHHHHHCCEEEEEECCCCCCCCCCEEEECCCCCCCCCC
QGQGQGGNDQQDNPNQAKFPYVIELDQSDKQPLIGSHTYVNVLNNVPEAGKIVLKETFTM
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHEEH
AENGKTYVWKVDKNKVKKQEIKTKPFSKGYVEVTSGLTMQDKIAQPLPGMKDGMEVGSIV
HCCCCEEEEEECCHHHHHHHHCCCCCCCCEEEEECCCEEHHHHHCCCCCCCCCCCCCCCC
KP
CC
>Mature Secondary Structure
MFQLRKKMTRKQLALLSAGVLTCVVGGTYLIMNHQQQEIVSSVNKVKALTIKEAMEQGKD
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCC
ISLTLAGEVTANNSSKVKIDSSKGEVKDVFVKKGDVVKVGQPLFSYETSQRLTAQSSEFD
EEEEEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEECCCHHHCCCHHHHHCCCCCCE
VQTKANQLQVAKTNAALKWETYNRKVNEINTLKSRYNTAPDESLLEQIRSAEDSVSQALS
EEECCCEEEEEECCCEEEEEHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DAKTADSDVKTAQIELDKANATAATEKGKLEYDTVKSDTAGTIVSLNTDLPNQSKSKKEN
HHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCHHH
ETFMEIIDKSKMLVKGNISEFDRDKLKIDQKVEVIDRKDNSKKWTGKVTQVGNLKAEEKG
HHHHHHHHCCCEEEECCCCHHCHHHHHHCCEEEEEECCCCCCCCCCEEEECCCCCCCCCC
QGQGQGGNDQQDNPNQAKFPYVIELDQSDKQPLIGSHTYVNVLNNVPEAGKIVLKETFTM
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHEEH
AENGKTYVWKVDKNKVKKQEIKTKPFSKGYVEVTSGLTMQDKIAQPLPGMKDGMEVGSIV
HCCCCEEEEEECCHHHHHHHHCCCCCCCCEEEEECCCEEHHHHHCCCCCCCCCCCCCCCC
KP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]