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The map label for this gene is ykrA [H]

Identifier: 19746729

GI number: 19746729

Start: 1526881

End: 1528269

Strand: Reverse

Name: ykrA [H]

Synonym: spyM18_1852

Alternate gene names: 19746729

Gene position: 1528269-1526881 (Counterclockwise)

Preceding gene: 19746731

Following gene: 19746727

Centisome position: 80.65

GC content: 37.8

Gene sequence:

>1389_bases
TTGACAGTAAAAGCAGTCTTTTTTGATATTGATGGGACCCTTCTCAATGATCGTAAAAATATCCAAAAAACAACGCAAAA
AGCCATCCAACAACTCAAAAAACAAGGCATTATGGTCGGTTTAGCAACTGGTCGTGGACCGGGATTTGTACAACCTTTTC
TAGAAAATTTTGGATTAGATTTTGCCGTTACTTACAATGGGCAATATATCTTAACAAGAGATAAGGTCTTATATCAGAAT
CAATTGCCAAAGTCGATGATTTACAAAGTGATTCGCTATGCCAACGAAAAAAAGCGAGAAATTTCTCTTGGAACAGCTTC
TGGATTAGCAGGATCGCGTATTATTGATATGGGGACTAGCCCATTTGGACAAGTCATTAGTAGTTTTGTGCCCAAAAGTT
GGGCAAGAACAGTTGAGGGTAGTTTTAAGCATTTGATTCGCCGAATCAAGCCTCAGAGTTTTAGAAATTTAGTAACTATT
ATGCGGGAGCCTATTTATCAGGTTGTTCTGGTAGCGTCACAAGCTGAAACTAAGAAAATACAAGAGAAGTTCCCTCATAT
AAAAATTACAAGAAGTAGTCCTTATTCCTTGGATCTGATCTCTGTTGATCAATCAAAAATAAAAGGAATTGAACGTTTGG
GAGAGATGTTTGGATTTGACTTGTCTGAAGTGATGGCTTTTGGAGATTCAGATAATGACCTTGAAATGTTATCAGGAGTT
GGTATCGGTATTGCTATGGGAAATGCTGAAACTGTGGTAAAAGATGGAGCCCATTTCACTACCGACTCTAATAATAATGA
TGGGATTTCCAAAGCCTTAGCTCACTACGGTCTCATCCATTTTGATATAGAGAAGAGCTTTAAAAGCCGTGATGAAAATT
TTAATAAAGTCAAAGATTTTCATCGTCTGATGGACTCAGATACTATTGAAACACCGCGTAGTTATACCATTTCAGAAGCT
GGTTATAGGTCAGGCTTCAAAGTAGAAGAAATTGTTGAGTTTCTTTACGCAGCAAGCAAGGGAGACCAACAACAATTTAC
ACAGGCTATTTTCGATTTGCATGGTGCTGTTGACCAAGCAGCTAATAAGGTACAAGCTAAAAAACATGTTGAAACGCCCC
TGATTGGGCAAGTTGATGCCTTAGCGGATTTGCTTTATTTTACTTATGGTTCTTTTGTACTGATGGGAGTAGATCCACAA
CCTATATTTGAAGCAGTACATGAAGCAAATATGGCTAAAATTTTTCCAGATGGCAAGGCACACTTTGACCCCGTTACCCA
TAAAATTCAAAAACCTGACTATTGGCAAGAGCGTCACGCACCTGAAGTAGCCATAAAAAAAGAGTTAGACAAACAATTAC
AAAAATCACTACAACGATTCGATAAATAG

Upstream 100 bases:

>100_bases
CCAGTGTGTAAGACTAGGATTTTTTTCATTTGATTGTCAAACTTCCTTTTATTTATGATATAATCTATTCTATCATAAAC
ACAGGAGGCAAAAGAAGGTT

Downstream 100 bases:

>100_bases
AGGTTTACTCTTTTAAATATCAAGAAATAAAAAGATATTGACTAGACTTAGCTCAGCACAAAAAACAAGCAATTTCGTTG
TAGATGCTGCTTGTTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 461

Protein sequence:

>462_residues
MTVKAVFFDIDGTLLNDRKNIQKTTQKAIQQLKKQGIMVGLATGRGPGFVQPFLENFGLDFAVTYNGQYILTRDKVLYQN
QLPKSMIYKVIRYANEKKREISLGTASGLAGSRIIDMGTSPFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNLVTI
MREPIYQVVLVASQAETKKIQEKFPHIKITRSSPYSLDLISVDQSKIKGIERLGEMFGFDLSEVMAFGDSDNDLEMLSGV
GIGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYGLIHFDIEKSFKSRDENFNKVKDFHRLMDSDTIETPRSYTISEA
GYRSGFKVEEIVEFLYAASKGDQQQFTQAIFDLHGAVDQAANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGVDPQ
PIFEAVHEANMAKIFPDGKAHFDPVTHKIQKPDYWQERHAPEVAIKKELDKQLQKSLQRFDK

Sequences:

>Translated_462_residues
MTVKAVFFDIDGTLLNDRKNIQKTTQKAIQQLKKQGIMVGLATGRGPGFVQPFLENFGLDFAVTYNGQYILTRDKVLYQN
QLPKSMIYKVIRYANEKKREISLGTASGLAGSRIIDMGTSPFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNLVTI
MREPIYQVVLVASQAETKKIQEKFPHIKITRSSPYSLDLISVDQSKIKGIERLGEMFGFDLSEVMAFGDSDNDLEMLSGV
GIGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYGLIHFDIEKSFKSRDENFNKVKDFHRLMDSDTIETPRSYTISEA
GYRSGFKVEEIVEFLYAASKGDQQQFTQAIFDLHGAVDQAANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGVDPQ
PIFEAVHEANMAKIFPDGKAHFDPVTHKIQKPDYWQERHAPEVAIKKELDKQLQKSLQRFDK
>Mature_461_residues
TVKAVFFDIDGTLLNDRKNIQKTTQKAIQQLKKQGIMVGLATGRGPGFVQPFLENFGLDFAVTYNGQYILTRDKVLYQNQ
LPKSMIYKVIRYANEKKREISLGTASGLAGSRIIDMGTSPFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNLVTIM
REPIYQVVLVASQAETKKIQEKFPHIKITRSSPYSLDLISVDQSKIKGIERLGEMFGFDLSEVMAFGDSDNDLEMLSGVG
IGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYGLIHFDIEKSFKSRDENFNKVKDFHRLMDSDTIETPRSYTISEAG
YRSGFKVEEIVEFLYAASKGDQQQFTQAIFDLHGAVDQAANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGVDPQP
IFEAVHEANMAKIFPDGKAHFDPVTHKIQKPDYWQERHAPEVAIKKELDKQLQKSLQRFDK

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=287, Percent_Identity=27.5261324041812, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI87081790, Length=293, Percent_Identity=27.3037542662116, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 51981; Mature: 51850

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKAVFFDIDGTLLNDRKNIQKTTQKAIQQLKKQGIMVGLATGRGPGFVQPFLENFGLD
CCEEEEEEECCCCEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCC
FAVTYNGQYILTRDKVLYQNQLPKSMIYKVIRYANEKKREISLGTASGLAGSRIIDMGTS
EEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCHHHEEECCCCCCCCCCEEEECCCC
PFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNLVTIMREPIYQVVLVASQAETKKI
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEKFPHIKITRSSPYSLDLISVDQSKIKGIERLGEMFGFDLSEVMAFGDSDNDLEMLSGV
HHHCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHCC
GIGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYGLIHFDIEKSFKSRDENFNKVKDF
CEEEEECCCHHHHCCCCEEECCCCCCCHHHHHHHHHCEEEEEHHHHHHHCCCCHHHHHHH
HRLMDSDTIETPRSYTISEAGYRSGFKVEEIVEFLYAASKGDQQQFTQAIFDLHGAVDQA
HHHHCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGVDPQPIFEAVHEANMAKIFPDGKA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCEECCCCCC
HFDPVTHKIQKPDYWQERHAPEVAIKKELDKQLQKSLQRFDK
CCCHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVKAVFFDIDGTLLNDRKNIQKTTQKAIQQLKKQGIMVGLATGRGPGFVQPFLENFGLD
CEEEEEEECCCCEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCC
FAVTYNGQYILTRDKVLYQNQLPKSMIYKVIRYANEKKREISLGTASGLAGSRIIDMGTS
EEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCHHHEEECCCCCCCCCCEEEECCCC
PFGQVISSFVPKSWARTVEGSFKHLIRRIKPQSFRNLVTIMREPIYQVVLVASQAETKKI
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEKFPHIKITRSSPYSLDLISVDQSKIKGIERLGEMFGFDLSEVMAFGDSDNDLEMLSGV
HHHCCCEEEECCCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHCC
GIGIAMGNAETVVKDGAHFTTDSNNNDGISKALAHYGLIHFDIEKSFKSRDENFNKVKDF
CEEEEECCCHHHHCCCCEEECCCCCCCHHHHHHHHHCEEEEEHHHHHHHCCCCHHHHHHH
HRLMDSDTIETPRSYTISEAGYRSGFKVEEIVEFLYAASKGDQQQFTQAIFDLHGAVDQA
HHHHCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ANKVQAKKHVETPLIGQVDALADLLYFTYGSFVLMGVDPQPIFEAVHEANMAKIFPDGKA
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCEECCCCCC
HFDPVTHKIQKPDYWQERHAPEVAIKKELDKQLQKSLQRFDK
CCCHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]