Click here to switch to the map view.

The map label for this gene is 19746711

Identifier: 19746711

GI number: 19746711

Start: 1509203

End: 1509637

Strand: Reverse

Name: 19746711

Synonym: spyM18_1827

Alternate gene names: NA

Gene position: 1509637-1509203 (Counterclockwise)

Preceding gene: 19746712

Following gene: 19746710

Centisome position: 79.66

GC content: 37.7

Gene sequence:

>435_bases
TTGGAATATGACAAAATCAATCACTACTTGGTTGATATCTTCAACCGTATTTTGGTAATTGAAGAGATGAGTTTAAAAAC
CAGTCAATTTAATGATGTCTCTTTAAAAGAGATGCACACTATTGAAATTATCGGCAAATATGATCAGGTGACTCCAAGTG
ATATCGCCAGAGAATTAATGGTAACGTTAGGGACAGTAACGACTAGCTTAAATAAATTAGAAGCAAAAGGTTATATCGCA
AGAACGCGATCACGCTCAGATAGGCGAGTTGTTTACCTGTCATTAACAAAAAGGGGTCGACTTTTGGACCGCCTCCATGC
AAAGTTCCATAAAAATATGGTTGGACATGTCATTGCTGATATGAGTGATGAAGAGATGCAGGCATTGGTGCGTGGACTAG
GGAATCTACATCAATTTTTGGAGGATTTGGTTTAA

Upstream 100 bases:

>100_bases
CGACCAAATTTTCAAGGGAAGTAAGACAGCTATTGCTTGCAAAATACTTTGACCTTTGATATAATTTGATTGTCAAAGTT
TATTGCTAGGAGGTGTTTAC

Downstream 100 bases:

>100_bases
ATGATTTTTTCTAAAATCAGTCAGGTAGCCCACTATGTTCCACAGCAGTTAGTGACTAATAATGATTTAGCTAGCATAAT
GGACACTAGTCATGAGTGGA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR Family Regulatory Protein; Regulatory Protein MarR; MarR-Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator BlaI/MecI/CopY Family

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MEYDKINHYLVDIFNRILVIEEMSLKTSQFNDVSLKEMHTIEIIGKYDQVTPSDIARELMVTLGTVTTSLNKLEAKGYIA
RTRSRSDRRVVYLSLTKRGRLLDRLHAKFHKNMVGHVIADMSDEEMQALVRGLGNLHQFLEDLV

Sequences:

>Translated_144_residues
MEYDKINHYLVDIFNRILVIEEMSLKTSQFNDVSLKEMHTIEIIGKYDQVTPSDIARELMVTLGTVTTSLNKLEAKGYIA
RTRSRSDRRVVYLSLTKRGRLLDRLHAKFHKNMVGHVIADMSDEEMQALVRGLGNLHQFLEDLV
>Mature_144_residues
MEYDKINHYLVDIFNRILVIEEMSLKTSQFNDVSLKEMHTIEIIGKYDQVTPSDIARELMVTLGTVTTSLNKLEAKGYIA
RTRSRSDRRVVYLSLTKRGRLLDRLHAKFHKNMVGHVIADMSDEEMQALVRGLGNLHQFLEDLV

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16650; Mature: 16650

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYDKINHYLVDIFNRILVIEEMSLKTSQFNDVSLKEMHTIEIIGKYDQVTPSDIARELM
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEECCCCCCCHHHHHHHHH
VTLGTVTTSLNKLEAKGYIARTRSRSDRRVVYLSLTKRGRLLDRLHAKFHKNMVGHVIAD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHC
MSDEEMQALVRGLGNLHQFLEDLV
CCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEYDKINHYLVDIFNRILVIEEMSLKTSQFNDVSLKEMHTIEIIGKYDQVTPSDIARELM
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEECCCCCCCHHHHHHHHH
VTLGTVTTSLNKLEAKGYIARTRSRSDRRVVYLSLTKRGRLLDRLHAKFHKNMVGHVIAD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHC
MSDEEMQALVRGLGNLHQFLEDLV
CCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA