Click here to switch to the map view.

The map label for this gene is yrxA [H]

Identifier: 19746383

GI number: 19746383

Start: 1201170

End: 1201691

Strand: Reverse

Name: yrxA [H]

Synonym: spyM18_1437

Alternate gene names: 19746383

Gene position: 1201691-1201170 (Counterclockwise)

Preceding gene: 19746384

Following gene: 19746382

Centisome position: 63.41

GC content: 34.87

Gene sequence:

>522_bases
ATGAAAGCAGAAGATCGTCGTCAAAAAATTATTGAGTGCTTAAATAGTGAACAAAAAGCTGTATCTGCTACTCGTTTAGG
TAAGTTATTAGGAGTGAGTCGCCAAATAATCGTTGGAGATATAGCTCTTCTTCGAGCTCAGCAGATTGATATTATTTCGA
CTCCAAAAGGTTATATTATGTCAACAGCGCTTTATAGTCACCAATTTTGTGCACGTATTGTGTGCCAACATAATGTAGAA
GAAACTAAAAAAGAATTAGAAATTATTTTAGCTCATCAAGGGATTATTACGACGGTAGAGGTAGAACATCCTATTTACGG
TATGATAACAGCCCCTTTAAATATTAAGACACACTCTGATGTAACTAATTTCATGTCCAAACTCAGTCAATCTAAAGCAG
AGTTATTGTCTTCGTTGACAGAAGGACTACATAGTCACTTAATTTCGTGTCCTAGTCAAGAAGCCTTTTTAGCTATCAAG
CATGATCTAGAATTAGCAGGTATCTTATACAAAGGAATATAA

Upstream 100 bases:

>100_bases
AACCAGACTTTGGTCTGGTTTTTTGGTTCTATATCCTAAGAAGAAAGAAAACCCTGCTTAAAAATATGATATGATAGAAA
TAAAAAAGGATAGATAGATT

Downstream 100 bases:

>100_bases
CTATAGTATATTATGCCATTGATGGTTGTTATGAATACCATGCTAAAATATTCTATTGATTATTTATCAGCAACAAGGTA
TCGTTTAAAAATACCAAAAG

Product: transcriptional regulator

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKAEDRRQKIIECLNSEQKAVSATRLGKLLGVSRQIIVGDIALLRAQQIDIISTPKGYIMSTALYSHQFCARIVCQHNVE
ETKKELEIILAHQGIITTVEVEHPIYGMITAPLNIKTHSDVTNFMSKLSQSKAELLSSLTEGLHSHLISCPSQEAFLAIK
HDLELAGILYKGI

Sequences:

>Translated_173_residues
MKAEDRRQKIIECLNSEQKAVSATRLGKLLGVSRQIIVGDIALLRAQQIDIISTPKGYIMSTALYSHQFCARIVCQHNVE
ETKKELEIILAHQGIITTVEVEHPIYGMITAPLNIKTHSDVTNFMSKLSQSKAELLSSLTEGLHSHLISCPSQEAFLAIK
HDLELAGILYKGI
>Mature_173_residues
MKAEDRRQKIIECLNSEQKAVSATRLGKLLGVSRQIIVGDIALLRAQQIDIISTPKGYIMSTALYSHQFCARIVCQHNVE
ETKKELEIILAHQGIITTVEVEHPIYGMITAPLNIKTHSDVTNFMSKLSQSKAELLSSLTEGLHSHLISCPSQEAFLAIK
HDLELAGILYKGI

Specific function: Unknown

COG id: COG1827

COG function: function code R; Predicted small molecule binding protein (contains 3H domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004173
- InterPro:   IPR013196
- InterPro:   IPR011991
- ProDom:   PD469575 [H]

Pfam domain/function: PF02829 3H; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 19190; Mature: 19190

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAEDRRQKIIECLNSEQKAVSATRLGKLLGVSRQIIVGDIALLRAQQIDIISTPKGYIM
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCHHH
STALYSHQFCARIVCQHNVEETKKELEIILAHQGIITTVEVEHPIYGMITAPLNIKTHSD
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCEECCCHHH
VTNFMSKLSQSKAELLSSLTEGLHSHLISCPSQEAFLAIKHDLELAGILYKGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHCCC
>Mature Secondary Structure
MKAEDRRQKIIECLNSEQKAVSATRLGKLLGVSRQIIVGDIALLRAQQIDIISTPKGYIM
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCHHH
STALYSHQFCARIVCQHNVEETKKELEIILAHQGIITTVEVEHPIYGMITAPLNIKTHSD
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEECCEECCCHHH
VTNFMSKLSQSKAELLSSLTEGLHSHLISCPSQEAFLAIKHDLELAGILYKGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8444804; 9384377 [H]