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The map label for this gene is comB [H]

Identifier: 19745606

GI number: 19745606

Start: 431482

End: 432063

Strand: Reverse

Name: comB [H]

Synonym: spyM18_0542

Alternate gene names: 19745606

Gene position: 432063-431482 (Counterclockwise)

Preceding gene: 19745607

Following gene: 19745605

Centisome position: 22.8

GC content: 31.27

Gene sequence:

>582_bases
ATGAATCCAAACCTTTTTAAAAGTGCGGAATTTTATCATCGACGTCATCATAACTTTGCAACTTTCTTGATTTTGCCATC
CGTTTTGTTAGTGAGCTTCTTAGTTCTTTTTTCTCTCTTTGCTAAAAAAGAAATTACCATTACTTCACAAGGAGAAATGA
CGCCAACAAAAGTTATTGCTTCAGTCCAATCAACTAGTGACCATACTATTGTCGTCAACAATTTAAAAAACAATAAATTT
ATTAAGAAAGGTGATGTTATTATCCAATACTCAAAAACAATGGAAAATTCTCAAAAAAAAGCTTTAGAAAAACAATTAGC
CACTCTTAACAAACAAAAAAATGGACTCCAAATACTCAAAACCAGTCTAGAACAAGAAACTAACTTATTTAAGGGAGAAG
ATGAATTCGGCTATAGCGATACGTTTAATCATTTTCTCAAACAAACCCAAGATATAATCATTGGGTTTGCTAAAAAAATG
CTGAAGTCAATAATCAAGCAAGTCTTGCTAATCATGCCATTTCAGTTATTACTAGTCAGCTTGACGAACTTCATCAAAAA
ATTACAGATTATGAAGAGCTAA

Upstream 100 bases:

>100_bases
GTGCTTGATGAGGGCAAAATTATTGAAACAGGATCTCATCAAGAATTAATGACTAAACAAGGTTTCTATCATCATTTATT
TAGTGGTTAAGGAGAATAAC

Downstream 100 bases:

>100_bases
AGCGAGCTATTAATAATCAAGAATATAAGCTTTCACCTGAGAATCCACATCAAACTGCCCTAAAAAAATATCAAACTCAA
TTTCAAGCACAAGAAGATAA

Product: N-terminal fragment of BlpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNPNLFKSAEFYHRRHHNFATFLILPSVLLVSFLVLFSLFAKKEITITSQGEMTPTKVIASVQSTSDHTIVVNNLKNNKF
IKKGDVIIQYSKTMENSQKKALEKQLATLNKQKNGLQILKTSLEQETNLFKGEDEFGYSDTFNHFLKQTQDIIIGFAKKM
LKSIIKQVLLIMPFQLLLVSLTNFIKKLQIMKS

Sequences:

>Translated_193_residues
MNPNLFKSAEFYHRRHHNFATFLILPSVLLVSFLVLFSLFAKKEITITSQGEMTPTKVIASVQSTSDHTIVVNNLKNNKF
IKKGDVIIQYSKTMENSQKKALEKQLATLNKQKNGLQILKTSLEQETNLFKGEDEFGYSDTFNHFLKQTQDIIIGFAKKM
LKSIIKQVLLIMPFQLLLVSLTNFIKKLQIMKS
>Mature_193_residues
MNPNLFKSAEFYHRRHHNFATFLILPSVLLVSFLVLFSLFAKKEITITSQGEMTPTKVIASVQSTSDHTIVVNNLKNNKF
IKKGDVIIQYSKTMENSQKKALEKQLATLNKQKNGLQILKTSLEQETNLFKGEDEFGYSDTFNHFLKQTQDIIIGFAKKM
LKSIIKQVLLIMPFQLLLVSLTNFIKKLQIMKS

Specific function: Required for induction of competence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005696 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22157; Mature: 22157

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPNLFKSAEFYHRRHHNFATFLILPSVLLVSFLVLFSLFAKKEITITSQGEMTPTKVIA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
SVQSTSDHTIVVNNLKNNKFIKKGDVIIQYSKTMENSQKKALEKQLATLNKQKNGLQILK
HHHCCCCCEEEEECCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TSLEQETNLFKGEDEFGYSDTFNHFLKQTQDIIIGFAKKMLKSIIKQVLLIMPFQLLLVS
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTNFIKKLQIMKS
HHHHHHHHHHHCC
>Mature Secondary Structure
MNPNLFKSAEFYHRRHHNFATFLILPSVLLVSFLVLFSLFAKKEITITSQGEMTPTKVIA
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
SVQSTSDHTIVVNNLKNNKFIKKGDVIIQYSKTMENSQKKALEKQLATLNKQKNGLQILK
HHHCCCCCEEEEECCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TSLEQETNLFKGEDEFGYSDTFNHFLKQTQDIIIGFAKKMLKSIIKQVLLIMPFQLLLVS
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTNFIKKLQIMKS
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7883181; 11463916; 1987129; 8407811 [H]