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The map label for this gene is 19745458

Identifier: 19745458

GI number: 19745458

Start: 296536

End: 296886

Strand: Reverse

Name: 19745458

Synonym: spyM18_0340

Alternate gene names: NA

Gene position: 296886-296536 (Counterclockwise)

Preceding gene: 19745506

Following gene: 19745457

Centisome position: 15.67

GC content: 30.77

Gene sequence:

>351_bases
ATGTTCCCAACATTTGAAAAGATAAAGGAATTAGCAGATAGACAAGGTATTTCCATCAATAAATTGGAGGAAAATTTAGG
GTATAGTAGAAATACAATATACAATTTAAAAACCAAAAAACCAAACGCTGAACGAATCGCTGAGATTGCCGATTATTTTA
ATGTCAGTACAGATTACCTTCTTGGTAGAACGGATAATCCTAAAATCGCTAATTCCACTATTAGTAAAGAAAAAATAGAC
TTTAAAAAAATAGCTGCTGAATCTATGTCTTATGATGGAAAATCTTTAACAGATGATGATATTGACTTAATCGCAGCAGT
ATTAGAGCAAAGATTCAAGAATAGAGATTAG

Upstream 100 bases:

>100_bases
TACAAGATATATTGTAATCTATTGATTAAACAAAGTCAACTATTTTAATCAATTTATTTCAATGTTTTTTGTCAATCTCT
CTAGAAAGGTTGATATATCA

Downstream 100 bases:

>100_bases
TATATGAGTGTATCAACAAAACAATTGGTTCAGACGTACGGTTATGAACTAGTATTTTATGATGATCGTGGAGCAGATAA
AAAAGCATTTGCTAACCATG

Product: repressor protein

Products: NA

Alternate protein names: Transcriptional Regulator; Cro/CI Family Phage Transcriptional Regulator; Phage Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; Phage Transcriptional Regulator Cro/CI Family; Repressor; XRE Family Transcriptional Regulator; Phage Associated Repressor; Prophage Ps1 Protein; HTH-Type Transcriptional Regulator YobD; Phage Repressor; Phage Cro/CI Transcriptional Regulator; HTH-Type Transcriptional Regulator; Transcription Repressor; Rep Protein; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MFPTFEKIKELADRQGISINKLEENLGYSRNTIYNLKTKKPNAERIAEIADYFNVSTDYLLGRTDNPKIANSTISKEKID
FKKIAAESMSYDGKSLTDDDIDLIAAVLEQRFKNRD

Sequences:

>Translated_116_residues
MFPTFEKIKELADRQGISINKLEENLGYSRNTIYNLKTKKPNAERIAEIADYFNVSTDYLLGRTDNPKIANSTISKEKID
FKKIAAESMSYDGKSLTDDDIDLIAAVLEQRFKNRD
>Mature_116_residues
MFPTFEKIKELADRQGISINKLEENLGYSRNTIYNLKTKKPNAERIAEIADYFNVSTDYLLGRTDNPKIANSTISKEKID
FKKIAAESMSYDGKSLTDDDIDLIAAVLEQRFKNRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13285; Mature: 13285

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPTFEKIKELADRQGISINKLEENLGYSRNTIYNLKTKKPNAERIAEIADYFNVSTDYL
CCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEE
LGRTDNPKIANSTISKEKIDFKKIAAESMSYDGKSLTDDDIDLIAAVLEQRFKNRD
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFPTFEKIKELADRQGISINKLEENLGYSRNTIYNLKTKKPNAERIAEIADYFNVSTDYL
CCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEE
LGRTDNPKIANSTISKEKIDFKKIAAESMSYDGKSLTDDDIDLIAAVLEQRFKNRD
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA