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The map label for this gene is 18978425

Identifier: 18978425

GI number: 18978425

Start: 1893535

End: 1893981

Strand: Direct

Name: 18978425

Synonym: PF2053

Alternate gene names: NA

Gene position: 1893535-1893981 (Clockwise)

Preceding gene: 18978424

Following gene: 18978433

Centisome position: 99.23

GC content: 34.9

Gene sequence:

>447_bases
ATGAGGAGGATGGACAAAGTAGACCTCCAGCTCATCAAAATACTCTCACAAAACTCAAGACTCACATATCGCGAATTGGC
TGAAATGCTCGGAACTACCAGGCAGAGGGTTGCCAGGAAAGTCGACAAATTAAAAAAATTAGGCATTATTAGAAAATTTA
CAATAATTCCAAACTTGGAAAAGTTAAATTACATGTATGCGATTCTATTGATAAAAGTGAAAGCAACTGAAAACATATAC
CAAGTTGCAAAGGTTCTCAAAGATCACGAAGATGTTAAAATATTGGAGCTAGGAGTAGGAAAGTACAACATAATAGCCCA
TGTTTTAGTTCCAAAGGATATTAAAAAAGCACAAGAAAAGGTCAACGATGTAATTAAAGAAATTAATGGTATTGAAGATC
TCGAAGTCGAGTTTGTTAGTGACATTCCAAAGTTTGAGCTTCTCTAA

Upstream 100 bases:

>100_bases
ACTCAACTAGAGACTTGTAACTTTATAATAATCTTTGAATATTGGAAATCATCCGAAACTTTTTTATACAGGCGAATATT
CATCAAAAAGGGGGTTATTT

Downstream 100 bases:

>100_bases
GCTATAACCTGGGGCTCTTCCAACACTTTTATCTTTCTTATCTCTGCCTTTCTTAGCGGGTAGATCTTCTTTGCCTCCTT
TGCAATCTCAGCTGCAATTT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRRMDKVDLQLIKILSQNSRLTYRELAEMLGTTRQRVARKVDKLKKLGIIRKFTIIPNLEKLNYMYAILLIKVKATENIY
QVAKVLKDHEDVKILELGVGKYNIIAHVLVPKDIKKAQEKVNDVIKEINGIEDLEVEFVSDIPKFELL

Sequences:

>Translated_148_residues
MRRMDKVDLQLIKILSQNSRLTYRELAEMLGTTRQRVARKVDKLKKLGIIRKFTIIPNLEKLNYMYAILLIKVKATENIY
QVAKVLKDHEDVKILELGVGKYNIIAHVLVPKDIKKAQEKVNDVIKEINGIEDLEVEFVSDIPKFELL
>Mature_148_residues
MRRMDKVDLQLIKILSQNSRLTYRELAEMLGTTRQRVARKVDKLKKLGIIRKFTIIPNLEKLNYMYAILLIKVKATENIY
QVAKVLKDHEDVKILELGVGKYNIIAHVLVPKDIKKAQEKVNDVIKEINGIEDLEVEFVSDIPKFELL

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): REG2_PYRFU (Q8TZE2)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_579782.1
- ProteinModelPortal:   Q8TZE2
- SMR:   Q8TZE2
- EnsemblBacteria:   EBPYRT00000004947
- GeneID:   1469940
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF2053
- NMPDR:   fig|186497.1.peg.2110
- GeneTree:   EBGT00050000022216
- HOGENOM:   HBG740878
- OMA:   QRISRRM
- ProtClustDB:   CLSK491899
- GO:   GO:0005622
- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- PRINTS:   PR00033
- SMART:   SM00344

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11; SSF54909 Dimer_A_B_barrel

EC number: NA

Molecular weight: Translated: 17215; Mature: 17215

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS00519 HTH_ASNC_1; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRMDKVDLQLIKILSQNSRLTYRELAEMLGTTRQRVARKVDKLKKLGIIRKFTIIPNLE
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KLNYMYAILLIKVKATENIYQVAKVLKDHEDVKILELGVGKYNIIAHVLVPKDIKKAQEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHEEECCCHHHHHHHHH
VNDVIKEINGIEDLEVEFVSDIPKFELL
HHHHHHHHCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRRMDKVDLQLIKILSQNSRLTYRELAEMLGTTRQRVARKVDKLKKLGIIRKFTIIPNLE
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KLNYMYAILLIKVKATENIYQVAKVLKDHEDVKILELGVGKYNIIAHVLVPKDIKKAQEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHEEECCCHHHHHHHHH
VNDVIKEINGIEDLEVEFVSDIPKFELL
HHHHHHHHCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA