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The map label for this gene is 18978406

Identifier: 18978406

GI number: 18978406

Start: 1877092

End: 1877781

Strand: Reverse

Name: 18978406

Synonym: PF2034

Alternate gene names: NA

Gene position: 1877781-1877092 (Counterclockwise)

Preceding gene: 18978407

Following gene: 18978404

Centisome position: 98.4

GC content: 38.99

Gene sequence:

>690_bases
GTGGCTTCAAGAGGTGATGCCCCAGTTATCCTGACAGTATCGATTCTGGAAAAGAAGGGTGGAAAACTCATGAAAGCAAA
AAGAGAGGCATTACTGAGTTTATTTCAAGCAATAAAAGAAAATAAAGTTGATGAGGACATAGTAGAATTACTTCTGCTTA
TAAATTCAATAAAAGGAGTTTATACAACCTCCTCTTGTTCTGGGAGGATAGGAATAATCGAGGAGCCTTCACTTGGAGCT
AAGCCCCTCTCGAGATGGTTGATAAAGGTTCATAGGCCAATTAAATTTGAAGAGGCAAAGAAGGCCCTAAAAAATGCTCA
AAAGGGGTTAATATTTCTGAAAAGCCAACCTCCAATTTTTCACGTGGTCACAGAAAGCTTAGAACTCGCAAGAAAAATAC
ATGAAATTGGACTTTCATCTGGATTTAAGTACACCACATACAAGGTAATATCAAGAAGATATCTTGTGGAAATTAACGGC
ACTGAATACTTAACTGTCCCCCTGGGAAAGGATGGAAAAGTCTTTGTGACGGACGAATACTTAGAATTTGTCATTGAAAT
AGGAAATCAAATGCTGATGAGGGGTAAATCTAGGCTTCCTAGGTTGAGAGAGAAGTTTGAAGAGCTAAAAGAGGAAGTTG
GTGAAGATCCTCTCTTCACCACTCTGAGTACTGAGAAACTCTCGCTATAG

Upstream 100 bases:

>100_bases
ACTGGAGGAGGGTTCACAGGTTTGTTTTTCTGTTTGCGTTCTGGTATAATTTTGTTAGGTTTCATTCTCGGTTTGGTTGT
CCGCCTGGTGATGTGACTGA

Downstream 100 bases:

>100_bases
AGAGTTGCCAGTCAAGGATATTGTTCTCCACTATATACCTCCACTCTTTATAACACTCCTTTTCGAGGTTTTCAAGAACT
CTAACGTCCTGGGTAATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MASRGDAPVILTVSILEKKGGKLMKAKREALLSLFQAIKENKVDEDIVELLLLINSIKGVYTTSSCSGRIGIIEEPSLGA
KPLSRWLIKVHRPIKFEEAKKALKNAQKGLIFLKSQPPIFHVVTESLELARKIHEIGLSSGFKYTTYKVISRRYLVEING
TEYLTVPLGKDGKVFVTDEYLEFVIEIGNQMLMRGKSRLPRLREKFEELKEEVGEDPLFTTLSTEKLSL

Sequences:

>Translated_229_residues
MASRGDAPVILTVSILEKKGGKLMKAKREALLSLFQAIKENKVDEDIVELLLLINSIKGVYTTSSCSGRIGIIEEPSLGA
KPLSRWLIKVHRPIKFEEAKKALKNAQKGLIFLKSQPPIFHVVTESLELARKIHEIGLSSGFKYTTYKVISRRYLVEING
TEYLTVPLGKDGKVFVTDEYLEFVIEIGNQMLMRGKSRLPRLREKFEELKEEVGEDPLFTTLSTEKLSL
>Mature_228_residues
ASRGDAPVILTVSILEKKGGKLMKAKREALLSLFQAIKENKVDEDIVELLLLINSIKGVYTTSSCSGRIGIIEEPSLGAK
PLSRWLIKVHRPIKFEEAKKALKNAQKGLIFLKSQPPIFHVVTESLELARKIHEIGLSSGFKYTTYKVISRRYLVEINGT
EYLTVPLGKDGKVFVTDEYLEFVIEIGNQMLMRGKSRLPRLREKFEELKEEVGEDPLFTTLSTEKLSL

Specific function: Unknown

COG id: COG1590

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0130 family [H]

Homologues:

Organism=Homo sapiens, GI42734381, Length=168, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003827
- InterPro:   IPR022908 [H]

Pfam domain/function: PF02676 TYW3 [H]

EC number: NA

Molecular weight: Translated: 25835; Mature: 25704

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRGDAPVILTVSILEKKGGKLMKAKREALLSLFQAIKENKVDEDIVELLLLINSIKGV
CCCCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
YTTSSCSGRIGIIEEPSLGAKPLSRWLIKVHRPIKFEEAKKALKNAQKGLIFLKSQPPIF
EEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCCCH
HVVTESLELARKIHEIGLSSGFKYTTYKVISRRYLVEINGTEYLTVPLGKDGKVFVTDEY
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEEECCCEEEEEECCCCCCEEEEHHH
LEFVIEIGNQMLMRGKSRLPRLREKFEELKEEVGEDPLFTTLSTEKLSL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCHHCCC
>Mature Secondary Structure 
ASRGDAPVILTVSILEKKGGKLMKAKREALLSLFQAIKENKVDEDIVELLLLINSIKGV
CCCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
YTTSSCSGRIGIIEEPSLGAKPLSRWLIKVHRPIKFEEAKKALKNAQKGLIFLKSQPPIF
EEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCCCH
HVVTESLELARKIHEIGLSSGFKYTTYKVISRRYLVEINGTEYLTVPLGKDGKVFVTDEY
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEEECCCEEEEEECCCCCCEEEEHHH
LEFVIEIGNQMLMRGKSRLPRLREKFEELKEEVGEDPLFTTLSTEKLSL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA