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The map label for this gene is secE

Identifier: 18978361

GI number: 18978361

Start: 1840279

End: 1840464

Strand: Direct

Name: secE

Synonym: PF1989

Alternate gene names: 18978361

Gene position: 1840279-1840464 (Clockwise)

Preceding gene: 18978360

Following gene: 18978362

Centisome position: 96.44

GC content: 42.47

Gene sequence:

>186_bases
ATGGCAGAATTACAGGAGAGAATCAGGCACTTCTGGAAGGAGTCAAGAAGAGCCTTCCTCGTGACAAAGAAGCCTAACTG
GGCTACTTATAAGAGGGCAGCAAAAATAACTGGGCTCGGAATCATTTTAATTGGTCTAATTGGGATGCTAATAAGAATTG
TGGGAATCTTAATCCTTGGAGGGTAA

Upstream 100 bases:

>100_bases
CTGAAGAATCACCATCAATTGAAATCAGCATACCAGAGCTTTAGTTGCCTTTCCTAAAATTTTTAAATAAAACTGTGACC
ATGGAAGTGGGGGGCAAGGA

Downstream 100 bases:

>100_bases
AAGATGGCAGGGAAAATCTTTGCTGTGAGAGTGACTCATGGACAGGAAGAGACAACTGCAAAGCTAATTTACAGTAAGGT
TAGAACTTACAATCTTCCTA

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: Protein transport protein Sec61 gamma subunit homolog

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MAELQERIRHFWKESRRAFLVTKKPNWATYKRAAKITGLGIILIGLIGMLIRIVGILILGG

Sequences:

>Translated_61_residues
MAELQERIRHFWKESRRAFLVTKKPNWATYKRAAKITGLGIILIGLIGMLIRIVGILILGG
>Mature_60_residues
AELQERIRHFWKESRRAFLVTKKPNWATYKRAAKITGLGIILIGLIGMLIRIVGILILGG

Specific function: Involved in protein export

COG id: COG2443

COG function: function code U; Preprotein translocase subunit Sss1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECE_PYRFU (Q8TZK2)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_579718.1
- PDB:   3MP7
- PDBsum:   3MP7
- ProteinModelPortal:   Q8TZK2
- SMR:   Q8TZK2
- EnsemblBacteria:   EBPYRT00000004518
- GeneID:   1469873
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF1989
- NMPDR:   fig|186497.1.peg.2043
- GeneTree:   EBGT00050000023166
- OMA:   FLVTKKP
- ProtClustDB:   PRK09400
- HAMAP:   MF_00422
- InterPro:   IPR022943
- InterPro:   IPR008158
- TIGRFAMs:   TIGR00327

Pfam domain/function: SSF103456 SecE_euk_arc

EC number: NA

Molecular weight: Translated: 6933; Mature: 6801

Theoretical pI: Translated: 11.96; Mature: 11.96

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xf6605f8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELQERIRHFWKESRRAFLVTKKPNWATYKRAAKITGLGIILIGLIGMLIRIVGILILG
CCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
G
H
>Mature Secondary Structure 
AELQERIRHFWKESRRAFLVTKKPNWATYKRAAKITGLGIILIGLIGMLIRIVGILILG
CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
G
H

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA