Click here to switch to the map view.

The map label for this gene is 18978357

Identifier: 18978357

GI number: 18978357

Start: 1836717

End: 1837220

Strand: Direct

Name: 18978357

Synonym: PF1985

Alternate gene names: NA

Gene position: 1836717-1837220 (Clockwise)

Preceding gene: 18978356

Following gene: 33359585

Centisome position: 96.25

GC content: 38.69

Gene sequence:

>504_bases
GTGCACTTTATATATATGGAGAGGCATTATACTTTGAAAGAGGCATCAAAAATCCTTGGAGTTACTGTAAAAACACTTCA
GAATTGGGACAAACAGGGAAAAATCAGAGTTATCAGAACACCTGGTGGGCGAAGAAGCATTCCAGAAAGTGAAATAAAGA
GGATACTCGGAATCCACGAGGAGAGAAAAGTGGTTGGTTATGCAAGAGTCTCAAGTAGAACACAAAAAGATGACTTGAAG
AGGCAAGTACAGGCAATCCAACAGTATGCGAAAGAAAAAGGCTGGAATGTTGAAATCCTCAAGGACATTAGTTCGGGATT
GAATGAAAAGAGGAAAAACTCCTCAAAATGGTGGCAAACAAGAAAGTGTCAAAGTCATCATCACACATCCCGACAGACTA
ACAAGATTTGGATTCAAAACACTCAAAACACTCTTTCAAGCCCTTGGAACAGAGATAATAATAATCAACGAAACTCAAAA
AGAGCTAAGAGAAGAACTCATTGA

Upstream 100 bases:

>100_bases
GGCAAGAGTACAGCCCTACATAAAGTTTTTGAAAGTTAAAACCGTTTCTAATTGTTTTTCTTTTTGTGTAATTTCATGGA
AAATAATGGAAAGGGTGAGT

Downstream 100 bases:

>100_bases
AGACTTGATAACAATCATCTCGCACTTTGCTGGTAAATTATATGGAATGCATTCCCACAAGTACAAAGAGGTTGTAGAGA
ATGAAAAACAACTCCTCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MHFIYMERHYTLKEASKILGVTVKTLQNWDKQGKIRVIRTPGGRRSIPESEIKRILGIHEERKVVGYARVSSRTQKDDLK
RQVQAIQQYAKEKGWNVEILKDISSGLNEKRKNSSKWWQTRKCQSHHHTSRQTNKIWIQNTQNTLSSPWNRDNNNQRNSK
RAKRRTH

Sequences:

>Translated_167_residues
MHFIYMERHYTLKEASKILGVTVKTLQNWDKQGKIRVIRTPGGRRSIPESEIKRILGIHEERKVVGYARVSSRTQKDDLK
RQVQAIQQYAKEKGWNVEILKDISSGLNEKRKNSSKWWQTRKCQSHHHTSRQTNKIWIQNTQNTLSSPWNRDNNNQRNSK
RAKRRTH
>Mature_167_residues
MHFIYMERHYTLKEASKILGVTVKTLQNWDKQGKIRVIRTPGGRRSIPESEIKRILGIHEERKVVGYARVSSRTQKDDLK
RQVQAIQQYAKEKGWNVEILKDISSGLNEKRKNSSKWWQTRKCQSHHHTSRQTNKIWIQNTQNTLSSPWNRDNNNQRNSK
RAKRRTH

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 19884; Mature: 19884

Theoretical pI: Translated: 11.47; Mature: 11.47

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFIYMERHYTLKEASKILGVTVKTLQNWDKQGKIRVIRTPGGRRSIPESEIKRILGIHE
CEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCH
ERKVVGYARVSSRTQKDDLKRQVQAIQQYAKEKGWNVEILKDISSGLNEKRKNSSKWWQT
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
RKCQSHHHTSRQTNKIWIQNTQNTLSSPWNRDNNNQRNSKRAKRRTH
HHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MHFIYMERHYTLKEASKILGVTVKTLQNWDKQGKIRVIRTPGGRRSIPESEIKRILGIHE
CEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCH
ERKVVGYARVSSRTQKDDLKRQVQAIQQYAKEKGWNVEILKDISSGLNEKRKNSSKWWQT
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHH
RKCQSHHHTSRQTNKIWIQNTQNTLSSPWNRDNNNQRNSKRAKRRTH
HHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]