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The map label for this gene is 18978353

Identifier: 18978353

GI number: 18978353

Start: 1831391

End: 1832089

Strand: Reverse

Name: 18978353

Synonym: PF1981

Alternate gene names: NA

Gene position: 1832089-1831391 (Counterclockwise)

Preceding gene: 18978368

Following gene: 18978352

Centisome position: 96.01

GC content: 44.92

Gene sequence:

>699_bases
ATGCCCAGGGAAAAGGTTGTTAGGGTTTGGGATGAGAGGGAAGTAGTTTACTCTCCTAAGAGGTGGAGGATTCTCTGGGA
GAAGAGGGAGAAGGCTCTCAAGATAATGGAGCTCCTCAAGGATTTTGATCCTCATGTTTATGGGAGCGTAGCTAGGGGAG
ATGTGAGGAGGGATAGTGACATAGACATAGTTATTCCTTATAGAGTCCCAAGCTATTTAATTGAGCTCGCCTTGGGAGAT
TTAATTCAGAGGAGAAGAATAGTAATGGCTACTCCGTGGCACTTAATTAAGGGGCACATAGAGATCGATGAAGAAACAAC
TGTAACGTTTTTCTTAGTCGATCCAACTGATAGGGAGCTTGAGTTTTACAAGTGGGGAGGAATGCTTGACTTGTGGGGAG
TGAAGACCAAGCAGAGAGTCCCAGGGGTTAACAAAAAGTTAATTCTGATAATTCCAACTGATAAAGGACACATCGAAAGG
GAGGTGGTTGGAAGGGAGGCAGAAGTGGCAAAGATTCTTGGAGTTAGCGTAGATATAGTGGAGGAGAGGGTTAAGGTTCT
CACAAGAAGGGACAGAATTGGCAGGACTGGAATTTATCTTGATGAGGAAGTTCCGGACTGGAAGAGCTTTGAAGAATTCT
TGAAGGAGCTGGCTGATAGAGATCCTAACATAAGAAGGAGGGTGAGGGAGAGCTTGTGA

Upstream 100 bases:

>100_bases
TCAATCTTAGTTGTCATGATTACCTTCATTTATCTCCCCCCATTCAAGGAAGCTTTCTTCGTTAAAAACATTATTAAATG
GGGAAAAAGTAGTAATATTG

Downstream 100 bases:

>100_bases
GAAAAGTTTATAATTTTATGTATTCCTGTCCATTTTGAAGGGGCCGTAGGGTAGCTTGGCCCATCCTGCGGGCTTCGGGA
GCCCGCGACCCGGGTTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: DNA Polymerase Beta Domain Protein Region; DNA Polymerase Beta Subunit; DNA Polymerase Beta Domain-Containing Protein; Nucleotidyltransferase-Like Protein; DNA Polymerase Beta Superfamily Nucleotidyltransferase; DNA Polymerase Beta Family Nucleotidyltransferase

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MPREKVVRVWDEREVVYSPKRWRILWEKREKALKIMELLKDFDPHVYGSVARGDVRRDSDIDIVIPYRVPSYLIELALGD
LIQRRRIVMATPWHLIKGHIEIDEETTVTFFLVDPTDRELEFYKWGGMLDLWGVKTKQRVPGVNKKLILIIPTDKGHIER
EVVGREAEVAKILGVSVDIVEERVKVLTRRDRIGRTGIYLDEEVPDWKSFEEFLKELADRDPNIRRRVRESL

Sequences:

>Translated_232_residues
MPREKVVRVWDEREVVYSPKRWRILWEKREKALKIMELLKDFDPHVYGSVARGDVRRDSDIDIVIPYRVPSYLIELALGD
LIQRRRIVMATPWHLIKGHIEIDEETTVTFFLVDPTDRELEFYKWGGMLDLWGVKTKQRVPGVNKKLILIIPTDKGHIER
EVVGREAEVAKILGVSVDIVEERVKVLTRRDRIGRTGIYLDEEVPDWKSFEEFLKELADRDPNIRRRVRESL
>Mature_231_residues
PREKVVRVWDEREVVYSPKRWRILWEKREKALKIMELLKDFDPHVYGSVARGDVRRDSDIDIVIPYRVPSYLIELALGDL
IQRRRIVMATPWHLIKGHIEIDEETTVTFFLVDPTDRELEFYKWGGMLDLWGVKTKQRVPGVNKKLILIIPTDKGHIERE
VVGREAEVAKILGVSVDIVEERVKVLTRRDRIGRTGIYLDEEVPDWKSFEEFLKELADRDPNIRRRVRESL

Specific function: Unknown

COG id: COG2413

COG function: function code R; Predicted nucleotidyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27467; Mature: 27336

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPREKVVRVWDEREVVYSPKRWRILWEKREKALKIMELLKDFDPHVYGSVARGDVRRDSD
CCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC
IDIVIPYRVPSYLIELALGDLIQRRRIVMATPWHLIKGHIEIDEETTVTFFLVDPTDREL
CEEEECCCCHHHHHHHHHHHHHHHCEEEEECCHHHEEEEEEECCCCEEEEEEECCCCCCE
EFYKWGGMLDLWGVKTKQRVPGVNKKLILIIPTDKGHIEREVVGREAEVAKILGVSVDIV
EEEECCCEEEECCCCCHHHCCCCCCEEEEEEECCCCCHHHHHHCCHHHHHHHHCCHHHHH
EERVKVLTRRDRIGRTGIYLDEEVPDWKSFEEFLKELADRDPNIRRRVRESL
HHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure 
PREKVVRVWDEREVVYSPKRWRILWEKREKALKIMELLKDFDPHVYGSVARGDVRRDSD
CHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCC
IDIVIPYRVPSYLIELALGDLIQRRRIVMATPWHLIKGHIEIDEETTVTFFLVDPTDREL
CEEEECCCCHHHHHHHHHHHHHHHCEEEEECCHHHEEEEEEECCCCEEEEEEECCCCCCE
EFYKWGGMLDLWGVKTKQRVPGVNKKLILIIPTDKGHIEREVVGREAEVAKILGVSVDIV
EEEECCCEEEECCCCCHHHCCCCCCEEEEEEECCCCCHHHHHHCCHHHHHHHHCCHHHHH
EERVKVLTRRDRIGRTGIYLDEEVPDWKSFEEFLKELADRDPNIRRRVRESL
HHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA