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The map label for this gene is 18978330

Identifier: 18978330

GI number: 18978330

Start: 1808379

End: 1808852

Strand: Direct

Name: 18978330

Synonym: PF1958

Alternate gene names: NA

Gene position: 1808379-1808852 (Clockwise)

Preceding gene: 18978329

Following gene: 18978331

Centisome position: 94.77

GC content: 43.25

Gene sequence:

>474_bases
ATGAAATTCCTCGCCACATGCCCCCCTGGGAGAGAAGGAGATGCAATGCTCGAGCTCGAGTGGGCGTTGAATGCCAAGGT
GAAAAGAACAAGGTGGGGGGGAGTTTTAATAGGAGAGACCCCGCTAGGAAAGCAGGAGGCAATAGAGAGAATAAAGACGT
TTGAAACTTTCGCCCTTCAACGCTTTATCCCCATCGATTATGTAGTCCCTCTTGAGGAACTTGAAAATAAGATCGAAGAA
ATTGCCAAAACTATTCCCAGGGGGAAGTTTGCAGTTAGAGCTAAAGTTAGGGGAGCGAAAGTTGGGGAAAAGGAGCTTGA
GAGAAAGTTGGGAAGCATAATAAAAAAGATAACTGAAAACCCAGTTGATTTAGAGAACCCCGATGTGATAGTTTTTGTCA
ATGTGTTAAAAAACAAAGCGTTGATCTCGATTTTAAGACCTGGAGAGATTGTCAAGAAGAAAGTTGAAGATTGA

Upstream 100 bases:

>100_bases
ATATAATGGAAGTTGGAGGAGAAAAGCTGGGCAATGTAACAGCCTTAACTGGGGCAAAGCTCCTCTTCTACCTCCTGGGA
ATGTTCGAGGGGATTAAGAA

Downstream 100 bases:

>100_bases
ACTTAAAGCTTATATTTTCCTTCTTCCACTCACTGTAGGTGATTAAAAATGAAGCAGAGAAAAGGAGTGCTTATTATTTT
GGATGGCCTTGGAGATAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKFLATCPPGREGDAMLELEWALNAKVKRTRWGGVLIGETPLGKQEAIERIKTFETFALQRFIPIDYVVPLEELENKIEE
IAKTIPRGKFAVRAKVRGAKVGEKELERKLGSIIKKITENPVDLENPDVIVFVNVLKNKALISILRPGEIVKKKVED

Sequences:

>Translated_157_residues
MKFLATCPPGREGDAMLELEWALNAKVKRTRWGGVLIGETPLGKQEAIERIKTFETFALQRFIPIDYVVPLEELENKIEE
IAKTIPRGKFAVRAKVRGAKVGEKELERKLGSIIKKITENPVDLENPDVIVFVNVLKNKALISILRPGEIVKKKVED
>Mature_157_residues
MKFLATCPPGREGDAMLELEWALNAKVKRTRWGGVLIGETPLGKQEAIERIKTFETFALQRFIPIDYVVPLEELENKIEE
IAKTIPRGKFAVRAKVRGAKVGEKELERKLGSIIKKITENPVDLENPDVIVFVNVLKNKALISILRPGEIVKKKVED

Specific function: Unknown

COG id: COG1818

COG function: function code R; Predicted RNA-binding protein, contains THUMP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17717; Mature: 17717

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS51165 THUMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLATCPPGREGDAMLELEWALNAKVKRTRWGGVLIGETPLGKQEAIERIKTFETFALQ
CCEECCCCCCCCCCEEEEEEEECCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHH
RFIPIDYVVPLEELENKIEEIAKTIPRGKFAVRAKVRGAKVGEKELERKLGSIIKKITEN
HHCCCCEEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
PVDLENPDVIVFVNVLKNKALISILRPGEIVKKKVED
CCCCCCCCEEEEHHHHCCCHHEEEECCCHHHHHHCCC
>Mature Secondary Structure
MKFLATCPPGREGDAMLELEWALNAKVKRTRWGGVLIGETPLGKQEAIERIKTFETFALQ
CCEECCCCCCCCCCEEEEEEEECCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHH
RFIPIDYVVPLEELENKIEEIAKTIPRGKFAVRAKVRGAKVGEKELERKLGSIIKKITEN
HHCCCCEEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
PVDLENPDVIVFVNVLKNKALISILRPGEIVKKKVED
CCCCCCCCEEEEHHHHCCCHHEEEECCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA