Click here to switch to the map view.

The map label for this gene is 18978306

Identifier: 18978306

GI number: 18978306

Start: 1783451

End: 1783870

Strand: Reverse

Name: 18978306

Synonym: PF1934

Alternate gene names: NA

Gene position: 1783870-1783451 (Counterclockwise)

Preceding gene: 18978307

Following gene: 18978305

Centisome position: 93.48

GC content: 46.67

Gene sequence:

>420_bases
ATGGAAGCTTGGAGGGGCAGATCGCAGGCTGTAGTGGACAACCTTGCACCTAGAGTAGTTGATATGCTCGTTCCAGAAGG
ATTTAAGCCCACCCAGGAGGAGCAACTAAGTAGTTATGACGTAGAGAAGAAAGAGCTGGCTACAGTATACATGATAACAC
TAGTAAGCGGAAGTGGTGAGAAAGAGGAGGAGGTAGAAGAGGAAACCCCAACTCAGACTGAAACCCAGACGCCAACAGAA
ACTAGGACTGAGACCAAAACTCCAACTGAAACGACAACTACCACACCAACAGAAACAAAAGAGACACCAACACAAACCAC
TACTACCCAACCTGCAAGAACAGAAACGCAAGGGGGAATATGTGGTCCTGGATTGATTGTACTATTGGCAGCTCTAGGTG
TTTTAAGAAGAAGGAGCTGA

Upstream 100 bases:

>100_bases
TCTCAATTGGGGACTATGGGCTCTATGCAGCAGTCTTAGTAGGTTCTCAAGATGGTTATGGGCCTGACAAGTGGAGGCCA
GTTGCTGTTGAAGCAGAGCA

Downstream 100 bases:

>100_bases
CTTCACTTTACTTTAAATTTTTTCAAGGAGGGAAGAGAAATGGCTGGTGTTAGGCTTGTGGGTGTTTGGAAGCAGTTTGG
GAGTTTTACTGCGGTGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Pullulanase

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MEAWRGRSQAVVDNLAPRVVDMLVPEGFKPTQEEQLSSYDVEKKELATVYMITLVSGSGEKEEEVEEETPTQTETQTPTE
TRTETKTPTETTTTTPTETKETPTQTTTTQPARTETQGGICGPGLIVLLAALGVLRRRS

Sequences:

>Translated_139_residues
MEAWRGRSQAVVDNLAPRVVDMLVPEGFKPTQEEQLSSYDVEKKELATVYMITLVSGSGEKEEEVEEETPTQTETQTPTE
TRTETKTPTETTTTTPTETKETPTQTTTTQPARTETQGGICGPGLIVLLAALGVLRRRS
>Mature_139_residues
MEAWRGRSQAVVDNLAPRVVDMLVPEGFKPTQEEQLSSYDVEKKELATVYMITLVSGSGEKEEEVEEETPTQTETQTPTE
TRTETKTPTETTTTTPTETKETPTQTTTTQPARTETQGGICGPGLIVLLAALGVLRRRS

Specific function: Unknown

COG id: COG4945

COG function: function code G; Membrane-anchored protein predicted to be involved in regulation of amylopullulanase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15258; Mature: 15258

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAWRGRSQAVVDNLAPRVVDMLVPEGFKPTQEEQLSSYDVEKKELATVYMITLVSGSGE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHEEEEECCCCC
KEEEVEEETPTQTETQTPTETRTETKTPTETTTTTPTETKETPTQTTTTQPARTETQGGI
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CGPGLIVLLAALGVLRRRS
CCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEAWRGRSQAVVDNLAPRVVDMLVPEGFKPTQEEQLSSYDVEKKELATVYMITLVSGSGE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHEEEEECCCCC
KEEEVEEETPTQTETQTPTETRTETKTPTETTTTTPTETKETPTQTTTTQPARTETQGGI
CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CGPGLIVLLAALGVLRRRS
CCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA