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The map label for this gene is 18978303

Identifier: 18978303

GI number: 18978303

Start: 1780734

End: 1781477

Strand: Direct

Name: 18978303

Synonym: PF1931

Alternate gene names: NA

Gene position: 1780734-1781477 (Clockwise)

Preceding gene: 18978302

Following gene: 18978304

Centisome position: 93.32

GC content: 41.8

Gene sequence:

>744_bases
ATGGTAAGAAGAGTTAAAACCGGAATACCTGGAATGGACGAAATTTTACACGGTGGGATACCTGAAAGAAACGTAGTTTT
ACTAAGCGGTGGCCCAGGTACAGGAAAAAGTATCTTTAGTCAACAGTTCCTCTGGAATGGCCTCCAAATGGGAGAACCAG
GAATATACGTTGCTTTAGAGGAACACCCTGTCCAAGTTAGACAAAATATGGCCCAATTTGGCTGGGATGTCAGAAAATAC
GAAGAAGAAGGATTATTTGCAATGGTAGATGCATTCACAGCTGGAGTGGGCAAAAGCAAAGAATATGAGAAGTACATCGT
TCATGACCTTACAGACATTAGGGAGTTCATAGAAGTGCTTAGGCAAGCAATAAGGGACATAAATGCAAAGAGGGTGGTGG
TTGATTCAGTTACAACACTCTACATAAACAAGCCTGCCATGGCTAGAAGCATAATTCTTCAACTCAAGAGAGTTCTAGCC
GGAACTGGATGTACAAGCATCTTTGTTAGTCAGATAAGCGTTGGAGAGAGAGGTTTTGGTGGCCCAGGTGTAGAGCATGG
TGTTGATGGAATAATTAGACTGGATCTTGATGAAATAGACGGTGAACTTAAGCGTTCTCTCATAGTTTGGAAGATGAGAG
GTACAAGCCATTCAATGAAGAGACATCCTTTCGACATAACTGACAAGGGAATTATAGTATATCCAGACAAGGTATTGAAG
AGGGGTAGGATTTACGAACTCTAA

Upstream 100 bases:

>100_bases
GTGATGAATATTCCAAGGTAGAAACACTTAAATATTCTTGGCAAATTATAGTATATTGAAGTTAGTAAAACCTATAGTGC
CTAGTGCGGGGGTGATTAAG

Downstream 100 bases:

>100_bases
AGGAGGTGAGGAAAGATGAGTGTAGAAGTTCCCCTAAATCCAATTACAAGAAGTGAAATCCACCAGTTAGAGAGCATACT
ACTATTCGCCACGCTATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MVRRVKTGIPGMDEILHGGIPERNVVLLSGGPGTGKSIFSQQFLWNGLQMGEPGIYVALEEHPVQVRQNMAQFGWDVRKY
EEEGLFAMVDAFTAGVGKSKEYEKYIVHDLTDIREFIEVLRQAIRDINAKRVVVDSVTTLYINKPAMARSIILQLKRVLA
GTGCTSIFVSQISVGERGFGGPGVEHGVDGIIRLDLDEIDGELKRSLIVWKMRGTSHSMKRHPFDITDKGIIVYPDKVLK
RGRIYEL

Sequences:

>Translated_247_residues
MVRRVKTGIPGMDEILHGGIPERNVVLLSGGPGTGKSIFSQQFLWNGLQMGEPGIYVALEEHPVQVRQNMAQFGWDVRKY
EEEGLFAMVDAFTAGVGKSKEYEKYIVHDLTDIREFIEVLRQAIRDINAKRVVVDSVTTLYINKPAMARSIILQLKRVLA
GTGCTSIFVSQISVGERGFGGPGVEHGVDGIIRLDLDEIDGELKRSLIVWKMRGTSHSMKRHPFDITDKGIIVYPDKVLK
RGRIYEL
>Mature_247_residues
MVRRVKTGIPGMDEILHGGIPERNVVLLSGGPGTGKSIFSQQFLWNGLQMGEPGIYVALEEHPVQVRQNMAQFGWDVRKY
EEEGLFAMVDAFTAGVGKSKEYEKYIVHDLTDIREFIEVLRQAIRDINAKRVVVDSVTTLYINKPAMARSIILQLKRVLA
GTGCTSIFVSQISVGERGFGGPGVEHGVDGIIRLDLDEIDGELKRSLIVWKMRGTSHSMKRHPFDITDKGIIVYPDKVLK
RGRIYEL

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 kaiC domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014774
- InterPro:   IPR004504
- InterPro:   IPR010624
- InterPro:   IPR022475 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 27654; Mature: 27654

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS51146 KAIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRVKTGIPGMDEILHGGIPERNVVLLSGGPGTGKSIFSQQFLWNGLQMGEPGIYVALE
CCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEC
EHPVQVRQNMAQFGWDVRKYEEEGLFAMVDAFTAGVGKSKEYEKYIVHDLTDIREFIEVL
CCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RQAIRDINAKRVVVDSVTTLYINKPAMARSIILQLKRVLAGTGCTSIFVSQISVGERGFG
HHHHHCCCCCEEEEECEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
GPGVEHGVDGIIRLDLDEIDGELKRSLIVWKMRGTSHSMKRHPFDITDKGIIVYPDKVLK
CCCHHHCCCCEEEEEHHHHHHHHHHEEEEEEECCCCCHHHCCCCCCCCCCEEECCHHHHC
RGRIYEL
CCCCCCC
>Mature Secondary Structure
MVRRVKTGIPGMDEILHGGIPERNVVLLSGGPGTGKSIFSQQFLWNGLQMGEPGIYVALE
CCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEC
EHPVQVRQNMAQFGWDVRKYEEEGLFAMVDAFTAGVGKSKEYEKYIVHDLTDIREFIEVL
CCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RQAIRDINAKRVVVDSVTTLYINKPAMARSIILQLKRVLAGTGCTSIFVSQISVGERGFG
HHHHHCCCCCEEEEECEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
GPGVEHGVDGIIRLDLDEIDGELKRSLIVWKMRGTSHSMKRHPFDITDKGIIVYPDKVLK
CCCHHHCCCCEEEEEHHHHHHHHHHEEEEEEECCCCCHHHCCCCCCCCCCEEECCHHHHC
RGRIYEL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA