Click here to switch to the map view.

The map label for this gene is 18978275

Identifier: 18978275

GI number: 18978275

Start: 1753356

End: 1754483

Strand: Direct

Name: 18978275

Synonym: PF1903

Alternate gene names: NA

Gene position: 1753356-1754483 (Clockwise)

Preceding gene: 18978273

Following gene: 18978276

Centisome position: 91.88

GC content: 38.03

Gene sequence:

>1128_bases
GTGTTGCCTAAGGAACTTTTAGATGCAACAAGAAGAAGAGGGAAGATTTATTTAAAATTTGCAAGTGAAGAACACTTTAG
GCTAGCTAGAGCAGTAATTCTTGCGTTTAAATCAAGTGTTGGACAAAAATACGAAGATCTTCAAGAGAAGTTAAGGCATA
TGGAGAGGGCTGAGAACTATAGAAAGGTTAGAGGATTTGCAAAGATTCTTGAGAGAGAGTCGGAGTTTACAACATCTTCA
TCCTTAGATCCATTGGAGGTCAGAAGGTTCCTCTTTAGCAGGGGGTATGTAACGAGTGAAATTGAAAGGGCTAAGATAAT
TGCAGAGGCCGCAACTTACTTCAACACAACTCCAGAAGAAATTGAAAGAGCTATGTTTGCAGATAGAGAAGAGGAAAAAA
TCCTAACAAGAGTTCCAGGGATAAGTGAAGAAGAGTTAATAAGAAGATACAATCTCTCCCTTCTCCAAACTCTCATGTTT
AACTCTGCAAGAATGAGTTTTCGGGTCTCAGAAAATCACAAGAGGATTTTTAGGCTAATAAAGCTCTTGGGTTTGATGTA
TGAGATAAGTGGGGAAAATATAGAAATCACAGGGCCTGCATCAATTTTAAAGATGACGAGGAAATATGGAACTTCTATGG
CAAAACTAATTCCAGAGATAGTGAAGGCCAAAGAGTGGGCGATAAAGGCCGAGATAATAGAGGACAAGAGAGTTTACTTC
TTTGAACTCTCAAGTGAAGATGATATCTTACTACCCAAACTCGAAGTAAGTGTGGAGTATGATTCCTCCCTTGAAAGGGA
GTTTGTAACTAAAATAAAGAGAATCCTGGGAGTGGAGGTCATAAGAGAGCCAGGGATAATTAAGGCTGGCCAATATGCCT
ACATACCTGATTTCCTCATCAGAAAGAACGGAAAGGAAGTTTACGTTGAAATTGCAGGTTTCTGGACTAGAAGTTATATT
AAATCAAAGCTAGAAAAACTTTCCAATGTTGACGTGAAAATGCTAATAATAGTCAATGACGAGCTTTTGGCAGATAAACT
TGGTAAAATTCACGACGTTATAGTTATGAGAAAGGGAAAGATCCCTTATAAAGAAGTCATCTTAAAGCTAAAAGAGATGC
TGAATTAG

Upstream 100 bases:

>100_bases
CTTCCCTTAATGAGAACTGTCCCCTTGTCATAATATAATTCAACCTTCACATTCCCAGGGTTGAGAAATTCCTTTTAAAT
CCCTTTACCCTATAAGCGAT

Downstream 100 bases:

>100_bases
TCAGCTCTGATGGATTTCATCACATCTCAGCTCCCCGATTCCTCATCATACATTAACTTTATTTTTTTGAAGGTCTATTT
ATATTTGGGGGATAGCAATG

Product: translation initiation factor IF-2

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MLPKELLDATRRRGKIYLKFASEEHFRLARAVILAFKSSVGQKYEDLQEKLRHMERAENYRKVRGFAKILERESEFTTSS
SLDPLEVRRFLFSRGYVTSEIERAKIIAEAATYFNTTPEEIERAMFADREEEKILTRVPGISEEELIRRYNLSLLQTLMF
NSARMSFRVSENHKRIFRLIKLLGLMYEISGENIEITGPASILKMTRKYGTSMAKLIPEIVKAKEWAIKAEIIEDKRVYF
FELSSEDDILLPKLEVSVEYDSSLEREFVTKIKRILGVEVIREPGIIKAGQYAYIPDFLIRKNGKEVYVEIAGFWTRSYI
KSKLEKLSNVDVKMLIIVNDELLADKLGKIHDVIVMRKGKIPYKEVILKLKEMLN

Sequences:

>Translated_375_residues
MLPKELLDATRRRGKIYLKFASEEHFRLARAVILAFKSSVGQKYEDLQEKLRHMERAENYRKVRGFAKILERESEFTTSS
SLDPLEVRRFLFSRGYVTSEIERAKIIAEAATYFNTTPEEIERAMFADREEEKILTRVPGISEEELIRRYNLSLLQTLMF
NSARMSFRVSENHKRIFRLIKLLGLMYEISGENIEITGPASILKMTRKYGTSMAKLIPEIVKAKEWAIKAEIIEDKRVYF
FELSSEDDILLPKLEVSVEYDSSLEREFVTKIKRILGVEVIREPGIIKAGQYAYIPDFLIRKNGKEVYVEIAGFWTRSYI
KSKLEKLSNVDVKMLIIVNDELLADKLGKIHDVIVMRKGKIPYKEVILKLKEMLN
>Mature_375_residues
MLPKELLDATRRRGKIYLKFASEEHFRLARAVILAFKSSVGQKYEDLQEKLRHMERAENYRKVRGFAKILERESEFTTSS
SLDPLEVRRFLFSRGYVTSEIERAKIIAEAATYFNTTPEEIERAMFADREEEKILTRVPGISEEELIRRYNLSLLQTLMF
NSARMSFRVSENHKRIFRLIKLLGLMYEISGENIEITGPASILKMTRKYGTSMAKLIPEIVKAKEWAIKAEIIEDKRVYF
FELSSEDDILLPKLEVSVEYDSSLEREFVTKIKRILGVEVIREPGIIKAGQYAYIPDFLIRKNGKEVYVEIAGFWTRSYI
KSKLEKLSNVDVKMLIIVNDELLADKLGKIHDVIVMRKGKIPYKEVILKLKEMLN

Specific function: Unknown

COG id: COG3372

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43754; Mature: 43754

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPKELLDATRRRGKIYLKFASEEHFRLARAVILAFKSSVGQKYEDLQEKLRHMERAENY
CCCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
RKVRGFAKILERESEFTTSSSLDPLEVRRFLFSRGYVTSEIERAKIIAEAATYFNTTPEE
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHH
IERAMFADREEEKILTRVPGISEEELIRRYNLSLLQTLMFNSARMSFRVSENHKRIFRLI
HHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECHHHHHHHHHH
KLLGLMYEISGENIEITGPASILKMTRKYGTSMAKLIPEIVKAKEWAIKAEIIEDKRVYF
HHHHHHHHCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCEEEE
FELSSEDDILLPKLEVSVEYDSSLEREFVTKIKRILGVEVIREPGIIKAGQYAYIPDFLI
EEECCCCCEEECEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEECCHHHH
RKNGKEVYVEIAGFWTRSYIKSKLEKLSNVDVKMLIIVNDELLADKLGKIHDVIVMRKGK
HCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHEEEEECCC
IPYKEVILKLKEMLN
CCHHHHHHHHHHHHC
>Mature Secondary Structure
MLPKELLDATRRRGKIYLKFASEEHFRLARAVILAFKSSVGQKYEDLQEKLRHMERAENY
CCCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
RKVRGFAKILERESEFTTSSSLDPLEVRRFLFSRGYVTSEIERAKIIAEAATYFNTTPEE
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHH
IERAMFADREEEKILTRVPGISEEELIRRYNLSLLQTLMFNSARMSFRVSENHKRIFRLI
HHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECHHHHHHHHHH
KLLGLMYEISGENIEITGPASILKMTRKYGTSMAKLIPEIVKAKEWAIKAEIIEDKRVYF
HHHHHHHHCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCCEEEE
FELSSEDDILLPKLEVSVEYDSSLEREFVTKIKRILGVEVIREPGIIKAGQYAYIPDFLI
EEECCCCCEEECEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEECCHHHH
RKNGKEVYVEIAGFWTRSYIKSKLEKLSNVDVKMLIIVNDELLADKLGKIHDVIVMRKGK
HCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHEEEEECCC
IPYKEVILKLKEMLN
CCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA