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The map label for this gene is 18978205

Identifier: 18978205

GI number: 18978205

Start: 1690436

End: 1691050

Strand: Reverse

Name: 18978205

Synonym: PF1833

Alternate gene names: NA

Gene position: 1691050-1690436 (Counterclockwise)

Preceding gene: 18978209

Following gene: 18978201

Centisome position: 88.62

GC content: 36.26

Gene sequence:

>615_bases
ATGGATACAATAGCCTTTGCATATATGGGCGGAAAAGAGTATGAGTGGCTATTTTTTGAAGTATATGATCGAGTGAGGCG
GTTCTATAGAGATGTTAGATTACCAATAAACATTGTCTATGCTGGAAAAATTATCCTTCCTCCTGGGACATTAATTAGAG
TTGAGACTGCAAGTGGGTTTGTTAATATGTATTCTTTTGAGGCAGTTGTTGAGGCTTTATATGGGAAGTTAGTCGAAATG
AGAGACGATGTAAATGACGATAGCATAACAAAGATTTTTGGAATCACGACGTTTCCTATTGGCTCAAGAGATAGATATTT
TGACATATACAAAAAGTACCTTGGAATCCAAGTTAATGTTGGGGATTATCATGTTTTGGCTCTTTCAATAAAGCCATTTT
TTACAGAAAATAAATATTTGTTTATCGAAAGGGTTTTTAAGGGCGTTCTTCATGAGATCGGCCACTTATATGGGCTCTCA
CACTGTCATGAAGATTGTGTAATGAATCCCCCAAAAGATATCAAAGACTGGGATCTTAGGACTCCTACATATTGCAATAC
CTGCTTGAGAAAATTAAAGAATAAGGAAGAGCTCATGCCCAAACTTCAGCTATAA

Upstream 100 bases:

>100_bases
AGACCAACGGCAAAATATACTGCTGTGATTATGGGGAGCATCTTTTTGGCCTTCATGGTGGAAAATAATATAAACCAAGA
TTAAGTCTTTTTTTCCTCGT

Downstream 100 bases:

>100_bases
CGTCGTGTTTGTGAATGCTCTCGTGACTTATTACCTTCACATGTATTTTCCCCTTGAATCTGTTCCTTGCCTTGTATACT
ATTTCTCTAGCAACGTCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MDTIAFAYMGGKEYEWLFFEVYDRVRRFYRDVRLPINIVYAGKIILPPGTLIRVETASGFVNMYSFEAVVEALYGKLVEM
RDDVNDDSITKIFGITTFPIGSRDRYFDIYKKYLGIQVNVGDYHVLALSIKPFFTENKYLFIERVFKGVLHEIGHLYGLS
HCHEDCVMNPPKDIKDWDLRTPTYCNTCLRKLKNKEELMPKLQL

Sequences:

>Translated_204_residues
MDTIAFAYMGGKEYEWLFFEVYDRVRRFYRDVRLPINIVYAGKIILPPGTLIRVETASGFVNMYSFEAVVEALYGKLVEM
RDDVNDDSITKIFGITTFPIGSRDRYFDIYKKYLGIQVNVGDYHVLALSIKPFFTENKYLFIERVFKGVLHEIGHLYGLS
HCHEDCVMNPPKDIKDWDLRTPTYCNTCLRKLKNKEELMPKLQL
>Mature_204_residues
MDTIAFAYMGGKEYEWLFFEVYDRVRRFYRDVRLPINIVYAGKIILPPGTLIRVETASGFVNMYSFEAVVEALYGKLVEM
RDDVNDDSITKIFGITTFPIGSRDRYFDIYKKYLGIQVNVGDYHVLALSIKPFFTENKYLFIERVFKGVLHEIGHLYGLS
HCHEDCVMNPPKDIKDWDLRTPTYCNTCLRKLKNKEELMPKLQL

Specific function: Unknown

COG id: COG1913

COG function: function code R; Predicted Zn-dependent proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23923; Mature: 23923

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTIAFAYMGGKEYEWLFFEVYDRVRRFYRDVRLPINIVYAGKIILPPGTLIRVETASGF
CCCEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEEECCCCC
VNMYSFEAVVEALYGKLVEMRDDVNDDSITKIFGITTFPIGSRDRYFDIYKKYLGIQVNV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCEEEEC
GDYHVLALSIKPFFTENKYLFIERVFKGVLHEIGHLYGLSHCHEDCVMNPPKDIKDWDLR
CCEEEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
TPTYCNTCLRKLKNKEELMPKLQL
CCHHHHHHHHHHCCHHHHCCCCCC
>Mature Secondary Structure
MDTIAFAYMGGKEYEWLFFEVYDRVRRFYRDVRLPINIVYAGKIILPPGTLIRVETASGF
CCCEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEEECCCCC
VNMYSFEAVVEALYGKLVEMRDDVNDDSITKIFGITTFPIGSRDRYFDIYKKYLGIQVNV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCEEEEC
GDYHVLALSIKPFFTENKYLFIERVFKGVLHEIGHLYGLSHCHEDCVMNPPKDIKDWDLR
CCEEEEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
TPTYCNTCLRKLKNKEELMPKLQL
CCHHHHHHHHHHCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA