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The map label for this gene is rpl32e [H]

Identifier: 18978179

GI number: 18978179

Start: 1675834

End: 1676226

Strand: Reverse

Name: rpl32e [H]

Synonym: PF1807

Alternate gene names: 18978179

Gene position: 1676226-1675834 (Counterclockwise)

Preceding gene: 18978180

Following gene: 18978178

Centisome position: 87.84

GC content: 45.55

Gene sequence:

>393_bases
ATGGATGAGAAGGAGTTTAAGAGGCTCCTCCGTGTTAGAGCGAGACTCAAGAGAAAGAAGCCAAGGTTCCTAAGACAAGA
ATGGTGGAGGTATCCAAAGTTCAAGAATGATCCCAAATGGAGAAGACCAAAGGGTATTGATAGCAAGATGAGGCTCAAGT
TAAAAGGAAAGCCAAGATCACCAAGCATCGGTTGGAGCTCTCCAAAGCTCGTTAGAGGTTTACACCCAAGTGGATACGAG
GAAGTGCTCGTTCACAATGTAAAGGAACTTGAGGCTCTTGATCCAAAGAGGCAGGCCGCGAGAATTGCACACACCGTAGG
AAAGAAGAAGAGAATCGAGATTATAAAGAGAGCTGAGGAACTTGGAATTAAAGTCTTGAACCCCAGGGTGTGA

Upstream 100 bases:

>100_bases
CAAGCTACAAGGATAACTAAGTGGGATAGAAGAATATTCCAGGATGGAATATACATTGTTGAGAAGGCTGGAAAGCCCAT
AACATTCTGAGGTGAGATAA

Downstream 100 bases:

>100_bases
GGTGAAAAAGTATGAACACTCTCAAGATGCAAAGAAGAATAGCTGCTGAAATCCTCAAATGTGGTGAGAATAGAATATGG
ATTGACCCTGAGAGAATTGA

Product: 50S ribosomal protein L32e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MDEKEFKRLLRVRARLKRKKPRFLRQEWWRYPKFKNDPKWRRPKGIDSKMRLKLKGKPRSPSIGWSSPKLVRGLHPSGYE
EVLVHNVKELEALDPKRQAARIAHTVGKKKRIEIIKRAEELGIKVLNPRV

Sequences:

>Translated_130_residues
MDEKEFKRLLRVRARLKRKKPRFLRQEWWRYPKFKNDPKWRRPKGIDSKMRLKLKGKPRSPSIGWSSPKLVRGLHPSGYE
EVLVHNVKELEALDPKRQAARIAHTVGKKKRIEIIKRAEELGIKVLNPRV
>Mature_130_residues
MDEKEFKRLLRVRARLKRKKPRFLRQEWWRYPKFKNDPKWRRPKGIDSKMRLKLKGKPRSPSIGWSSPKLVRGLHPSGYE
EVLVHNVKELEALDPKRQAARIAHTVGKKKRIEIIKRAEELGIKVLNPRV

Specific function: Unknown

COG id: COG1717

COG function: function code J; Ribosomal protein L32E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32e family [H]

Homologues:

Organism=Homo sapiens, GI4506635, Length=115, Percent_Identity=43.4782608695652, Blast_Score=95, Evalue=2e-20,
Organism=Homo sapiens, GI55743130, Length=115, Percent_Identity=43.4782608695652, Blast_Score=95, Evalue=2e-20,
Organism=Homo sapiens, GI55743128, Length=115, Percent_Identity=43.4782608695652, Blast_Score=95, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17536431, Length=105, Percent_Identity=40, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6319378, Length=116, Percent_Identity=42.2413793103448, Blast_Score=87, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24651273, Length=115, Percent_Identity=41.7391304347826, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI221460572, Length=115, Percent_Identity=41.7391304347826, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI221460569, Length=115, Percent_Identity=41.7391304347826, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI17864106, Length=115, Percent_Identity=41.7391304347826, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24651276, Length=115, Percent_Identity=41.7391304347826, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001515
- InterPro:   IPR018263
- ProDom:   PD003823 [H]

Pfam domain/function: PF01655 Ribosomal_L32e [H]

EC number: NA

Molecular weight: Translated: 15535; Mature: 15535

Theoretical pI: Translated: 11.80; Mature: 11.80

Prosite motif: PS00580 RIBOSOMAL_L32E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKEFKRLLRVRARLKRKKPRFLRQEWWRYPKFKNDPKWRRPKGIDSKMRLKLKGKPRS
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
PSIGWSSPKLVRGLHPSGYEEVLVHNVKELEALDPKRQAARIAHTVGKKKRIEIIKRAEE
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHH
LGIKVLNPRV
CCEECCCCCC
>Mature Secondary Structure
MDEKEFKRLLRVRARLKRKKPRFLRQEWWRYPKFKNDPKWRRPKGIDSKMRLKLKGKPRS
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
PSIGWSSPKLVRGLHPSGYEEVLVHNVKELEALDPKRQAARIAHTVGKKKRIEIIKRAEE
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHH
LGIKVLNPRV
CCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]