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The map label for this gene is 18978168

Identifier: 18978168

GI number: 18978168

Start: 1668574

End: 1669077

Strand: Direct

Name: 18978168

Synonym: PF1796

Alternate gene names: NA

Gene position: 1668574-1669077 (Clockwise)

Preceding gene: 18978167

Following gene: 18978169

Centisome position: 87.44

GC content: 41.87

Gene sequence:

>504_bases
ATGGAAATTCCCAATTATTTAAGGAGAGGTTATATAACCCCCGATGAACTCTTTTCGATCATCCCAAGGCCGAGCGAAGA
AAGACTCAGAAAAAGACCCGTAGCAATACCAGAGTGCCCTCAGCAAATTCCATGTACTCCATGTAAGGAGATATGTCCAG
TTAATGCAGTAATGATGGATCATCCAAACGATATACCTAAAGTGGACTATGAGAAGTGCATAGGATGTTCTCTATGCGTT
CAAGTTTGCCCTGGGCTTGCATTCTTCATGATTCACTATGTGGGAGACAAAGCTAGAATAACAATGCCCTATGAGCTATT
ACCCCTTCCAGAAAAAGGAGAAGAAGTCATTCTTCTTAACAGAGTTGGGGAAGAAGTTGGGAAAGGAAAAGTACTTGCAA
TTGTTCCCAGGGAGAAGTCAAAAGGAGATACTCCTATTATAACTGTTGAAGTTCCAATAGAGCTCGCGTGGGAAGTTAGG
GCAATTAAGGTGGTGAGAAAATGA

Upstream 100 bases:

>100_bases
GGGAAATAACTAAAACACAAAAGGAGCTCGAAGAATTCCGCTCTGGACCTTTTGGGAAGCATATAGTTGAAGGCATTAAA
AAGCTTCTGGAGGGATCATG

Downstream 100 bases:

>100_bases
AGATAATTTGCCGATGTAATGATGTCACACTTGAAGAAATTGAAAGGCTGATAGATGAAGGGGTAACGGAGTTAGAAGAG
CTTAGAAGACTACTAAGATT

Product: putative polyferredoxin

Products: NA

Alternate protein names: Proline Dehydrogenase Gamma Subunit; Polyferredoxin; Dye-Linked L-Proline Dehydrogenase Gamma2 Subunit; Ferredoxin; Polyferredoxin ; Proline Dehydrogenase; Dye-Linked L-Proline Dehydrogenase

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MEIPNYLRRGYITPDELFSIIPRPSEERLRKRPVAIPECPQQIPCTPCKEICPVNAVMMDHPNDIPKVDYEKCIGCSLCV
QVCPGLAFFMIHYVGDKARITMPYELLPLPEKGEEVILLNRVGEEVGKGKVLAIVPREKSKGDTPIITVEVPIELAWEVR
AIKVVRK

Sequences:

>Translated_167_residues
MEIPNYLRRGYITPDELFSIIPRPSEERLRKRPVAIPECPQQIPCTPCKEICPVNAVMMDHPNDIPKVDYEKCIGCSLCV
QVCPGLAFFMIHYVGDKARITMPYELLPLPEKGEEVILLNRVGEEVGKGKVLAIVPREKSKGDTPIITVEVPIELAWEVR
AIKVVRK
>Mature_167_residues
MEIPNYLRRGYITPDELFSIIPRPSEERLRKRPVAIPECPQQIPCTPCKEICPVNAVMMDHPNDIPKVDYEKCIGCSLCV
QVCPGLAFFMIHYVGDKARITMPYELLPLPEKGEEVILLNRVGEEVGKGKVLAIVPREKSKGDTPIITVEVPIELAWEVR
AIKVVRK

Specific function: Unknown

COG id: COG1142

COG function: function code C; Fe-S-cluster-containing hydrogenase components 2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18877; Mature: 18877

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIPNYLRRGYITPDELFSIIPRPSEERLRKRPVAIPECPQQIPCTPCKEICPVNAVMMD
CCCCHHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCEEEEC
HPNDIPKVDYEKCIGCSLCVQVCPGLAFFMIHYVGDKARITMPYELLPLPEKGEEVILLN
CCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECCCEEECCCCCCCEEEEEE
RVGEEVGKGKVLAIVPREKSKGDTPIITVEVPIELAWEVRAIKVVRK
HHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCEEEHHHEEEEEECC
>Mature Secondary Structure
MEIPNYLRRGYITPDELFSIIPRPSEERLRKRPVAIPECPQQIPCTPCKEICPVNAVMMD
CCCCHHHHHCCCCHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCEEEEC
HPNDIPKVDYEKCIGCSLCVQVCPGLAFFMIHYVGDKARITMPYELLPLPEKGEEVILLN
CCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECCCEEECCCCCCCEEEEEE
RVGEEVGKGKVLAIVPREKSKGDTPIITVEVPIELAWEVRAIKVVRK
HHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCEEEHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA